BLASTX nr result
ID: Mentha24_contig00040479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00040479
(404 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi... 102 4e-20
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ... 101 9e-20
ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citr... 100 2e-19
ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutr... 100 2e-19
ref|XP_007049050.1| Tetratricopeptide repeat (TPR)-like superfam... 100 2e-19
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar... 99 6e-19
gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis] 97 3e-18
ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Caps... 96 7e-18
ref|XP_007216509.1| hypothetical protein PRUPE_ppa025580mg, part... 96 7e-18
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera] 93 4e-17
ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Popu... 88 1e-15
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
gb|EPS60569.1| hypothetical protein M569_14234, partial [Genlise... 82 1e-13
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ... 80 4e-13
gb|EYU39869.1| hypothetical protein MIMGU_mgv1a017444mg [Mimulus... 79 5e-13
ref|XP_007142548.1| hypothetical protein PHAVU_008G290100g [Phas... 76 4e-12
>ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like, partial [Solanum tuberosum]
Length = 831
Score = 110 bits (276), Expect = 2e-22
Identities = 55/74 (74%), Positives = 64/74 (86%)
Frame = +1
Query: 181 KPKTIRYRLSQLCQQGQLNLARQLFDAIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLL 360
KP+TIR+RLS+LC+QGQ +LARQLFD IPQP+TVLWNT+IIG+VCN+MPHEAIS YSRL
Sbjct: 49 KPRTIRFRLSELCRQGQPHLARQLFDTIPQPSTVLWNTIIIGFVCNNMPHEAISFYSRLK 108
Query: 361 HAVISSVDRKCDAY 402
H V SSV CD Y
Sbjct: 109 H-VGSSV---CDQY 118
>ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Solanum lycopersicum]
Length = 835
Score = 110 bits (276), Expect = 2e-22
Identities = 55/74 (74%), Positives = 64/74 (86%)
Frame = +1
Query: 181 KPKTIRYRLSQLCQQGQLNLARQLFDAIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLL 360
KP+TIR+RLS+LC+QGQ +LARQLFD IPQP+TVLWNT+IIG+VCN+MPHEAIS YSRL
Sbjct: 51 KPRTIRFRLSELCRQGQPHLARQLFDTIPQPSTVLWNTIIIGFVCNNMPHEAISFYSRLK 110
Query: 361 HAVISSVDRKCDAY 402
H V SSV CD Y
Sbjct: 111 H-VGSSV---CDQY 120
>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 102 bits (255), Expect = 4e-20
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Frame = +1
Query: 115 AAATPPPQPCSTSEEAHQNPSLKPK--TIRYRLSQLCQQGQLNLARQLFDAIPQPTTVLW 288
++ATP P S S S PK TIRYRLS+LCQ+GQL+LARQLFDA+P+P+TVLW
Sbjct: 3 SSATPLPLSQSPSHLPLHTHSTNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLW 62
Query: 289 NTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
NT+IIG VCN+ P EA+ YS + SS KCD+Y
Sbjct: 63 NTIIIGLVCNNFPDEALLFYSNMKS---SSPQVKCDSY 97
>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329184|gb|EFH59603.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 824
Score = 101 bits (252), Expect = 9e-20
Identities = 53/107 (49%), Positives = 69/107 (64%), Gaps = 11/107 (10%)
Frame = +1
Query: 115 AAATPPPQPCSTSEEAHQN---------PSLKPKT--IRYRLSQLCQQGQLNLARQLFDA 261
A PPP P S + P+L P+T IR RLS++CQ+G LARQLFDA
Sbjct: 5 ALPLPPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQEGNPQLARQLFDA 64
Query: 262 IPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
IP+PTTVLWNT+IIG++CN++PHEA+ YSR+ ++ KCDAY
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKK---TAPFTKCDAY 108
>ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Citrus sinensis]
Length = 833
Score = 100 bits (249), Expect = 2e-19
Identities = 50/97 (51%), Positives = 67/97 (69%)
Frame = +1
Query: 112 PAAATPPPQPCSTSEEAHQNPSLKPKTIRYRLSQLCQQGQLNLARQLFDAIPQPTTVLWN 291
P A PPPQ + P LK TIR RLS++CQ+G+ +LARQLFD+I +PTTV+WN
Sbjct: 15 PTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWN 74
Query: 292 TLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
T+IIG+VCN++P+EAI +YS++ SS CD Y
Sbjct: 75 TIIIGFVCNNLPYEAILLYSQMKK---SSPYTSCDNY 108
>ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citrus clementina]
gi|557531841|gb|ESR43024.1| hypothetical protein
CICLE_v10011066mg [Citrus clementina]
Length = 833
Score = 100 bits (249), Expect = 2e-19
Identities = 50/97 (51%), Positives = 67/97 (69%)
Frame = +1
Query: 112 PAAATPPPQPCSTSEEAHQNPSLKPKTIRYRLSQLCQQGQLNLARQLFDAIPQPTTVLWN 291
P A PPPQ + P LK TIR RLS++CQ+G+ +LARQLFD+I +PTTV+WN
Sbjct: 15 PTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWN 74
Query: 292 TLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
T+IIG+VCN++P+EAI +YS++ SS CD Y
Sbjct: 75 TIIIGFVCNNLPYEAILLYSQMKK---SSPYTSCDNY 108
>ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutrema salsugineum]
gi|557107352|gb|ESQ47659.1| hypothetical protein
EUTSA_v10020073mg [Eutrema salsugineum]
Length = 825
Score = 100 bits (249), Expect = 2e-19
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 112 PAAATPPPQPCSTSEEAHQNPSLKPKT--IRYRLSQLCQQGQLNLARQLFDAIPQPTTVL 285
P + PPQ + + P+L P+T IR RLS++CQ G LARQLFDAIP+PTTVL
Sbjct: 13 PLSFQSPPQNQTRHSSSFSPPNLTPQTPSIRSRLSRICQDGNPQLARQLFDAIPKPTTVL 72
Query: 286 WNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
WNT+IIG++CN++PHEA+ YSR+ ++ KCD Y
Sbjct: 73 WNTIIIGFICNNLPHEALLFYSRMKK---TAPFTKCDPY 108
>ref|XP_007049050.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508701311|gb|EOX93207.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 923
Score = 100 bits (249), Expect = 2e-19
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Frame = +1
Query: 85 HRKYSASFIPAAATPPPQPCSTSEEAHQ--------NPSLKPKTIRYRLSQLCQQGQLNL 240
H S+ I AA P P + Q NP+L+ TIR RLSQLCQQG +L
Sbjct: 105 HLPLSSPSIAIAAAPNNNPFHALSHSSQTIISSPPPNPTLRTPTIRSRLSQLCQQGHPHL 164
Query: 241 ARQLFDAIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
ARQ+FD I +P TVLWNT++IG++CN+MP EA+ YS H SS KCD+Y
Sbjct: 165 ARQIFDTIAEPKTVLWNTIVIGFICNNMPQEALLFYS---HMKNSSPHTKCDSY 215
>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein
[Arabidopsis thaliana] gi|332643073|gb|AEE76594.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 820
Score = 99.0 bits (245), Expect = 6e-19
Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 11/107 (10%)
Frame = +1
Query: 115 AAATPPPQPCSTSEEAHQN---------PSLKPKT--IRYRLSQLCQQGQLNLARQLFDA 261
A PPP P S + P+L P+T IR RLS++CQ G LARQLFDA
Sbjct: 5 ALPLPPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDA 64
Query: 262 IPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
IP+PTTVLWNT+IIG++CN++PHEA+ YSR+ ++ CDAY
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKK---TAPFTNCDAY 108
>gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis]
Length = 820
Score = 96.7 bits (239), Expect = 3e-18
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 15/110 (13%)
Frame = +1
Query: 118 AATPPPQPCSTSEEAHQNPSL-------------KPKT--IRYRLSQLCQQGQLNLARQL 252
A+T P P S S A Q P+ KPKT IR RLS+LCQ+G+ +LARQL
Sbjct: 2 ASTSIPLPLSPSSPATQTPTTTTTQPPSPTISLPKPKTPTIRSRLSKLCQEGKPHLARQL 61
Query: 253 FDAIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
FD +P+PTTVLWNT+IIG++CN+ P +A+ Y+++ S+ D KCD+Y
Sbjct: 62 FDTLPRPTTVLWNTIIIGFICNNFPDDALLFYAQMKK---SAPDTKCDSY 108
>ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Capsella rubella]
gi|565478704|ref|XP_006296992.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
gi|482565700|gb|EOA29889.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
gi|482565701|gb|EOA29890.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
Length = 824
Score = 95.5 bits (236), Expect = 7e-18
Identities = 52/107 (48%), Positives = 65/107 (60%), Gaps = 11/107 (10%)
Frame = +1
Query: 115 AAATPPPQPCSTSEEAHQN---------PSLKPKT--IRYRLSQLCQQGQLNLARQLFDA 261
A PPP P S + P+L P+T IR RLS++CQ G LARQLFDA
Sbjct: 5 ALPLPPPPPLSLQSPSQNQTRHSSTFSPPTLPPQTPSIRSRLSKICQDGNPQLARQLFDA 64
Query: 262 IPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
IP+PTTVLWNT+IIG++CN M EA+ YSR+ ++ KCDAY
Sbjct: 65 IPKPTTVLWNTIIIGFICNSMSQEALLFYSRMKK---TAPFTKCDAY 108
>ref|XP_007216509.1| hypothetical protein PRUPE_ppa025580mg, partial [Prunus persica]
gi|462412659|gb|EMJ17708.1| hypothetical protein
PRUPE_ppa025580mg, partial [Prunus persica]
Length = 804
Score = 95.5 bits (236), Expect = 7e-18
Identities = 50/91 (54%), Positives = 66/91 (72%)
Frame = +1
Query: 130 PPQPCSTSEEAHQNPSLKPKTIRYRLSQLCQQGQLNLARQLFDAIPQPTTVLWNTLIIGY 309
PP+ S+S A P LK TIR RLS+LCQ+GQ LARQLFD +P+PTTVLWNT+IIG+
Sbjct: 24 PPENLSSS--ALPLPKLKTPTIRSRLSKLCQEGQPLLARQLFDTLPRPTTVLWNTIIIGF 81
Query: 310 VCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
+CN+MP+EA+ Y+++ SS K D+Y
Sbjct: 82 ICNNMPNEALLFYAQM---KASSPHIKSDSY 109
>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Frame = +1
Query: 97 SASFIPAAATPPPQPCSTSEEAHQNPSLKPKT------IRYRLSQLCQQGQLNLARQLFD 258
+++ +P +PP +T+ AH+ SL PKT IR RLS LC+QG + A LFD
Sbjct: 2 ASAALPHPVSPPSPHATTATPAHEPTSLPPKTPPKPPTIRSRLSHLCRQGHPHQALHLFD 61
Query: 259 AIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
+IP+PTTVLWNT+IIG++CN+MP +A+ Y+R+ +S K D+Y
Sbjct: 62 SIPRPTTVLWNTIIIGFICNNMPIDALLFYARMR----ASPSPKFDSY 105
>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Frame = +1
Query: 97 SASFIPAAATPPPQPCSTSEEAHQNPSLKPKT------IRYRLSQLCQQGQLNLARQLFD 258
+++ +P +PP +T+ AH+ SL PKT IR RLS LC+QG + A LFD
Sbjct: 2 ASAALPHPVSPPSPHATTATPAHEPTSLPPKTPPKPPTIRSRLSHLCRQGHPHQALHLFD 61
Query: 259 AIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
+IP+PTTVLWNT+IIG++CN+MP +A+ Y+R+ +S K D+Y
Sbjct: 62 SIPRPTTVLWNTIIIGFICNNMPIDALLFYARMR----ASPSPKFDSY 105
>ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Populus trichocarpa]
gi|550335185|gb|EEE92296.2| hypothetical protein
POPTR_0006s00960g [Populus trichocarpa]
Length = 820
Score = 87.8 bits (216), Expect = 1e-15
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 8/110 (7%)
Frame = +1
Query: 97 SASFIPAA-ATPPPQPCSTSEEAH-------QNPSLKPKTIRYRLSQLCQQGQLNLARQL 252
S+S +P +TP P + +++ +PSLK +IR RLS+LCQ+GQ ++A QL
Sbjct: 5 SSSSLPIPLSTPSHDPSNKTQKTSLFRISPPPSPSLKTPSIRSRLSKLCQEGQPHIALQL 64
Query: 253 FDAIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVDRKCDAY 402
FD P+PTTV+ NT+IIG++CN++P EAI YS+L SS+ K D+Y
Sbjct: 65 FDTFPRPTTVICNTIIIGFICNNLPLEAILFYSKLKS---SSLGTKFDSY 111
>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = +1
Query: 199 YRLSQLCQQGQLNLARQLFDAIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISS 378
+ L +LCQ+GQL+LARQLFDA+P+P+TVLWNT+IIG VCN+ P EA+ YS + SS
Sbjct: 9 HELCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKS---SS 65
Query: 379 VDRKCDAY 402
KCD+Y
Sbjct: 66 PQVKCDSY 73
>gb|EPS60569.1| hypothetical protein M569_14234, partial [Genlisea aurea]
Length = 740
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/55 (70%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Frame = +1
Query: 241 ARQLFDAIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRLLHAVISSVD-RKCDAY 402
AR LFDAIPQPTTVLWNTLIIGY+CN +P EAIS+YSR+L + + S D KCD+Y
Sbjct: 1 ARHLFDAIPQPTTVLWNTLIIGYICNGIPLEAISLYSRMLCSGVKSHDGTKCDSY 55
>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 828
Score = 79.7 bits (195), Expect = 4e-13
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 6/89 (6%)
Frame = +1
Query: 109 IPAAATPPPQPCSTSEEAHQNPSLKP------KTIRYRLSQLCQQGQLNLARQLFDAIPQ 270
+P + T PP T Q K +IR RLS+LC++GQ +LA L D++P+
Sbjct: 18 LPISTTHPPNQIHTLPNQKQKQKQKQWNKAISTSIRSRLSKLCREGQPHLALHLLDSLPR 77
Query: 271 PTTVLWNTLIIGYVCNDMPHEAISMYSRL 357
P+TV+WN++IIG++CN++PH+A+ +Y+++
Sbjct: 78 PSTVVWNSVIIGFICNNLPHQALLLYAKM 106
>gb|EYU39869.1| hypothetical protein MIMGU_mgv1a017444mg [Mimulus guttatus]
Length = 75
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/60 (65%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Frame = -1
Query: 302 MIRVFQRTVVGWGIASNSWRARLSWPCWQSWLKRYRIVLGLR----DGFWWASSEVEHGC 135
M+RVF RTVVG GI+SNSWRAR SWP WLKR RIVLGL WW S EV HGC
Sbjct: 1 MMRVFHRTVVGCGISSNSWRARCSWPSLHRWLKRKRIVLGLGGELWSVLWWVSCEVLHGC 60
>ref|XP_007142548.1| hypothetical protein PHAVU_008G290100g [Phaseolus vulgaris]
gi|561015681|gb|ESW14542.1| hypothetical protein
PHAVU_008G290100g [Phaseolus vulgaris]
Length = 802
Score = 76.3 bits (186), Expect = 4e-12
Identities = 32/56 (57%), Positives = 45/56 (80%)
Frame = +1
Query: 190 TIRYRLSQLCQQGQLNLARQLFDAIPQPTTVLWNTLIIGYVCNDMPHEAISMYSRL 357
TIR RLS+LCQQGQ LAR L D++P+ +T +WNT+IIG++CN MP EA+ +Y+ +
Sbjct: 26 TIRTRLSKLCQQGQPQLARHLLDSLPRASTAVWNTVIIGFICNKMPLEALQLYAEM 81