BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00040286
         (1135 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus...   590   e-166
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   555   e-155
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   554   e-155
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   553   e-155
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   547   e-153
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   547   e-153
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...   542   e-151
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...   541   e-151
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...   541   e-151
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...   541   e-151
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   540   e-151
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              540   e-151
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   540   e-151
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   531   e-148
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The...   518   e-144
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa...   516   e-144
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...   516   e-144
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...   516   e-144
gb|EPS71577.1| hypothetical protein M569_03175, partial [Genlise...   516   e-144
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   516   e-144

>gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus guttatus]
          Length = 1021

 Score =  590 bits (1522), Expect = e-166
 Identities = 290/377 (76%), Positives = 321/377 (85%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLRNKI EEQE IR+GKSKA+YA YFDLLPADMMAVITMHKLM LLM+G EHGCA
Sbjct: 228  LGWFEPLRNKIEEEQEFIRKGKSKASYANYFDLLPADMMAVITMHKLMALLMTG-EHGCA 286

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVVEGGDVSGANALDQDKLRKKVITLI 362
            RV  A+C IGDAIEQEVRIHYFLEKTKKK   KD    GD    N  +Q KLR+KV  L+
Sbjct: 287  RVVAAACVIGDAIEQEVRIHYFLEKTKKKKVTKDAETEGDKPDENIQEQAKLREKVTNLM 346

Query: 363  KKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRPA 542
            KKQ LRAV+QIV RQ ESQ W QDA+AKVGSRLIELI+QTAY+QPPA+Q AEGPPDI+PA
Sbjct: 347  KKQKLRAVRQIVNRQIESQAWGQDAKAKVGSRLIELIIQTAYIQPPASQSAEGPPDIKPA 406

Query: 543  FIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKGA 722
            F+HT + V+KE K+ SRRYG I+CDPL+RKGLERTARHMVIPYMPMLV PVKWT YDKGA
Sbjct: 407  FLHTFKTVAKEIKSNSRRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGA 466

Query: 723  YFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWAS 902
            Y YLPSYVMRTHGARQQR+T+KR PREQLKPVFEALDTLGS KWRVN++VL++IDRIWAS
Sbjct: 467  YLYLPSYVMRTHGARQQRDTVKRAPREQLKPVFEALDTLGSTKWRVNKRVLSIIDRIWAS 526

Query: 903  GGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVARK 1082
            GGRLGDLVDR DI LPE+PDT+D +L+            ENSERHSQRCD ELKLAVARK
Sbjct: 527  GGRLGDLVDRDDILLPEQPDTEDESLLQKWKWKVKSIKKENSERHSQRCDTELKLAVARK 586

Query: 1083 LKEEEGFFYPHNLDFRG 1133
            +KEEEGFFYPHN+DFRG
Sbjct: 587  MKEEEGFFYPHNVDFRG 603


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  555 bits (1431), Expect = e-155
 Identities = 278/379 (73%), Positives = 313/379 (82%), Gaps = 2/379 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+KIAEEQEL  +GKSKAAYAKY   LPADMMAVITMHKLMGLLM+GG+HG A
Sbjct: 229  LGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTA 288

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVV--EGGDVSGANALDQDKLRKKVIT 356
            RV QA+  IGDAIEQEVRIH FLEKTKK+ A KD    +G  V+     +Q+KLRKKV  
Sbjct: 289  RVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQ----EQEKLRKKVTN 344

Query: 357  LIKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIR 536
            L+KKQ LRAV QIV+RQ +S+PW QDA+AKVGSRLIEL+LQTAY+QPPANQLA  PPDIR
Sbjct: 345  LMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIR 404

Query: 537  PAFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDK 716
            PAF+H++R V+KE K+ SRRYG I+CD L+ KGLERTARHMVIPYMPMLV PVKWT YDK
Sbjct: 405  PAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDK 464

Query: 717  GAYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIW 896
            G + YLPSYVMRTHGARQQRE +KR  R QL+PVFEALDTLGS KWR+N++VL+VIDRIW
Sbjct: 465  GGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIW 524

Query: 897  ASGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVA 1076
            A GGRL DLVDR D PLPEEPDT+D  L             EN ERHSQRCDIELKLAVA
Sbjct: 525  AGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVA 584

Query: 1077 RKLKEEEGFFYPHNLDFRG 1133
            RK+K+EEGFFYPHN+DFRG
Sbjct: 585  RKMKDEEGFFYPHNVDFRG 603


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  554 bits (1428), Expect = e-155
 Identities = 276/379 (72%), Positives = 313/379 (82%), Gaps = 2/379 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+KIAEEQEL  +GKSKAAYAKYF  LPADMMAVITMHKLMGLLM+GG+HG A
Sbjct: 228  LGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTA 287

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVV--EGGDVSGANALDQDKLRKKVIT 356
            RV QA+  IGDAIEQEVRIH FLEKTKK+ A KD    +G  V+     +Q+KLRKKV  
Sbjct: 288  RVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQ----EQEKLRKKVTN 343

Query: 357  LIKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIR 536
            L+KKQ LRAV QIV+RQ +S+PW QDARAKVGSRLI+L+LQTAY+QPPANQLA  PPDIR
Sbjct: 344  LMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIR 403

Query: 537  PAFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDK 716
            PAF+H++R V+KE K+ SRRYG I+CD L+ KGLERTARHMVIPYMPMLV PVKWT YDK
Sbjct: 404  PAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDK 463

Query: 717  GAYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIW 896
            G + YLPSYVMRTHGARQQRE +KR  R QL+PVFEALDTLG+ KWR+N++VL+V+DRIW
Sbjct: 464  GGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIW 523

Query: 897  ASGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVA 1076
            A GGRL DLVDR D PLPEEPDT+D  L             EN ERHSQRCDIELKLAVA
Sbjct: 524  AGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVA 583

Query: 1077 RKLKEEEGFFYPHNLDFRG 1133
            RK+K+EE FFYPHN+DFRG
Sbjct: 584  RKMKDEESFFYPHNVDFRG 602


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  553 bits (1425), Expect = e-155
 Identities = 275/379 (72%), Positives = 313/379 (82%), Gaps = 2/379 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+KIAEEQEL  +GKSKAAYAKYF  LPADMMAVITMHKLMGLLM+GG+HG A
Sbjct: 228  LGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTA 287

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVV--EGGDVSGANALDQDKLRKKVIT 356
            RV QA+  IGDAIEQEVRIH FLEKTKK+ A KD    +G  V+     +Q+KLRKKV  
Sbjct: 288  RVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQ----EQEKLRKKVTN 343

Query: 357  LIKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIR 536
            L+KKQ LRAV QIV+RQ +S+PW QDARAKVGSRLI+L+LQTAY+QPPANQLA  PPDI 
Sbjct: 344  LMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIP 403

Query: 537  PAFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDK 716
            PAF+H++R V+KE K+ SRRYG I+CD L+ KGLERTARHMVIPYMPMLV PVKWT YDK
Sbjct: 404  PAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDK 463

Query: 717  GAYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIW 896
            G + YLPSYVMRTHGARQQRE +KR  R QL+PVFEALDTLG+ KWR+N++VL+V+DRIW
Sbjct: 464  GGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIW 523

Query: 897  ASGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVA 1076
            A GGRL DLVDR D PLPEEPDT+D  L+            EN ERHSQRCDIELKLAVA
Sbjct: 524  AGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAVA 583

Query: 1077 RKLKEEEGFFYPHNLDFRG 1133
            RK+K+EE FFYPHN+DFRG
Sbjct: 584  RKMKDEESFFYPHNVDFRG 602


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  547 bits (1410), Expect = e-153
 Identities = 272/378 (71%), Positives = 311/378 (82%), Gaps = 1/378 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+KIA+EQEL  +GKSKAAY+KYF LLPADMMAVITMHKLMGLLM+GGEHG A
Sbjct: 227  LGWFEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNA 286

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKD-VVEGGDVSGANALDQDKLRKKVITL 359
            RV QA+ TIGDAIEQEVRIH FLEKT+K  A KD  +E G+ +    L+Q KL KKV +L
Sbjct: 287  RVVQAALTIGDAIEQEVRIHKFLEKTEKHKAEKDRKMEDGEHA---TLEQKKLHKKVTSL 343

Query: 360  IKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRP 539
            +KKQ LRAV QIV+ Q +S+PW QDA+AKVGSRLIE +LQTAY+Q PA+QLA  PPDIRP
Sbjct: 344  MKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRP 403

Query: 540  AFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKG 719
            AFIH+ R V+KE K+ SRRYG I+CD L+ KGLERTARHMVIPYMPMLV PVKWT YDKG
Sbjct: 404  AFIHSTRTVAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKG 463

Query: 720  AYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWA 899
             + YLPSYVMRTHGARQQRE +KR  R QL+PVFEALDTLGS KWR+N++VL+V+DRIWA
Sbjct: 464  GHLYLPSYVMRTHGARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVDRIWA 523

Query: 900  SGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVAR 1079
             GGRL DLVDR D PLPEEPDT+D  +             EN ERHSQRCDIELKLAVA 
Sbjct: 524  GGGRLADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAH 583

Query: 1080 KLKEEEGFFYPHNLDFRG 1133
            ++K+EEGFFYPHN+DFRG
Sbjct: 584  RMKDEEGFFYPHNVDFRG 601


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  547 bits (1410), Expect = e-153
 Identities = 271/378 (71%), Positives = 312/378 (82%), Gaps = 1/378 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+KIA+EQEL  +GKSKAAY+KYF LLPADMMAVITMHKLMGLLM+GGEHG  
Sbjct: 230  LGWFEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNV 289

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDV-VEGGDVSGANALDQDKLRKKVITL 359
            RV QA+ TIGDAIEQEVRIH FLEKT+K  A KD  +E G+ +    L+Q KL KKV +L
Sbjct: 290  RVVQAALTIGDAIEQEVRIHKFLEKTEKHKAEKDRNMEDGEHA---TLEQKKLHKKVTSL 346

Query: 360  IKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRP 539
            +KKQ LRAV QIV+ Q +S+PW QDA+AKVGSRLIE +LQTAY+Q PA+QLA  PPDIRP
Sbjct: 347  MKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRP 406

Query: 540  AFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKG 719
            AFIH+ R ++KE K+ SRRYG I+CD L+ KGLERTARHMVIPYMPMLV PVKWT YDKG
Sbjct: 407  AFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKG 466

Query: 720  AYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWA 899
             + YLPSYVMRTHGARQQRE +KRT R QL+PVFEALDTLGS KWR+N++VL+V+DRIWA
Sbjct: 467  GHLYLPSYVMRTHGARQQREAVKRTSRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWA 526

Query: 900  SGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVAR 1079
             GGRL DLVDR D+PLPEEPDT+D  +             EN ERHSQRCDIELKLAVA 
Sbjct: 527  GGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAH 586

Query: 1080 KLKEEEGFFYPHNLDFRG 1133
            ++K+EEGFFYPHN+DFRG
Sbjct: 587  RMKDEEGFFYPHNVDFRG 604


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  542 bits (1396), Expect = e-151
 Identities = 262/377 (69%), Positives = 308/377 (81%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLRN I +EQ+L R+GK+K AYA Y D LPADMM+VITMHKLMGLLM+GGEHG  
Sbjct: 232  LGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTC 291

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVVEGGDVSGANALDQDKLRKKVITLI 362
            RV  A+CTIG+AIEQEVRIH FLE T+KK   KD   G   S A   +++KL KKV  L+
Sbjct: 292  RVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENGE--SDAAKKEREKLNKKVTNLM 349

Query: 363  KKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRPA 542
            KKQ L+AV+ IV +   S+ WS +ARAKVGSRLIEL+ QTA++QPPA+QLA+GPPDIRPA
Sbjct: 350  KKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPA 409

Query: 543  FIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKGA 722
            F+HT R V+K+ KN SRRYG IECDPL+ KGLE+TARHMVIPYMPMLV P+ WT YDKG 
Sbjct: 410  FVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGG 469

Query: 723  YFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWAS 902
            YF+LPSYVMR HGARQQRE +KRTPREQL+PVF+ALD LG+ +WRVN++VL+V+DRIWAS
Sbjct: 470  YFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWAS 529

Query: 903  GGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVARK 1082
            GG L DLVDR+D+PLPEEPDT+D TL+            EN ERHSQRCD ELKLAVARK
Sbjct: 530  GGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARK 589

Query: 1083 LKEEEGFFYPHNLDFRG 1133
            +K+EEGF+YPHNLDFRG
Sbjct: 590  MKDEEGFYYPHNLDFRG 606


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533046|gb|ESR44229.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score =  541 bits (1393), Expect = e-151
 Identities = 265/378 (70%), Positives = 310/378 (82%), Gaps = 1/378 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+ IA+EQE  R  K K AYA YFD LPADMMAVITMHKLMGLLM+GGEHG A
Sbjct: 235  LGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRA 294

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVV-EGGDVSGANALDQDKLRKKVITL 359
            RV QA+C IGDAIEQEVRIH FLEKTKKK   K+   E GD S     +Q+KLRKKV  L
Sbjct: 295  RVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDL 354

Query: 360  IKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRP 539
            IKKQ L AV++IVK Q + +PW QDARAKVGSR+IEL+ QTAY+Q PA+QL + PPDI P
Sbjct: 355  IKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFP 414

Query: 540  AFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKG 719
            AF HT+R VSKE K  S++YG IEC+PL+ KGLERTARHMVIPYMPMLV PVKWT YDKG
Sbjct: 415  AFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKG 474

Query: 720  AYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWA 899
            A+F+LPSYVMRTHGA+QQR+T+KRTP++QL+PVFEALDTLG+ KWRVN +VL+V+DRIW+
Sbjct: 475  AHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWS 534

Query: 900  SGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVAR 1079
             GGRL DLVDR+D+PLPE+P+T+D   +            EN ERHSQRCDIELKL+VAR
Sbjct: 535  CGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVAR 594

Query: 1080 KLKEEEGFFYPHNLDFRG 1133
            K+K+EEGF+YPHN+DFRG
Sbjct: 595  KMKDEEGFYYPHNVDFRG 612


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533045|gb|ESR44228.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score =  541 bits (1393), Expect = e-151
 Identities = 265/378 (70%), Positives = 310/378 (82%), Gaps = 1/378 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+ IA+EQE  R  K K AYA YFD LPADMMAVITMHKLMGLLM+GGEHG A
Sbjct: 235  LGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRA 294

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVV-EGGDVSGANALDQDKLRKKVITL 359
            RV QA+C IGDAIEQEVRIH FLEKTKKK   K+   E GD S     +Q+KLRKKV  L
Sbjct: 295  RVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDL 354

Query: 360  IKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRP 539
            IKKQ L AV++IVK Q + +PW QDARAKVGSR+IEL+ QTAY+Q PA+QL + PPDI P
Sbjct: 355  IKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFP 414

Query: 540  AFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKG 719
            AF HT+R VSKE K  S++YG IEC+PL+ KGLERTARHMVIPYMPMLV PVKWT YDKG
Sbjct: 415  AFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKG 474

Query: 720  AYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWA 899
            A+F+LPSYVMRTHGA+QQR+T+KRTP++QL+PVFEALDTLG+ KWRVN +VL+V+DRIW+
Sbjct: 475  AHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWS 534

Query: 900  SGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVAR 1079
             GGRL DLVDR+D+PLPE+P+T+D   +            EN ERHSQRCDIELKL+VAR
Sbjct: 535  CGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVAR 594

Query: 1080 KLKEEEGFFYPHNLDFRG 1133
            K+K+EEGF+YPHN+DFRG
Sbjct: 595  KMKDEEGFYYPHNVDFRG 612


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533044|gb|ESR44227.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score =  541 bits (1393), Expect = e-151
 Identities = 265/378 (70%), Positives = 310/378 (82%), Gaps = 1/378 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+ IA+EQE  R  K K AYA YFD LPADMMAVITMHKLMGLLM+GGEHG A
Sbjct: 235  LGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRA 294

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVV-EGGDVSGANALDQDKLRKKVITL 359
            RV QA+C IGDAIEQEVRIH FLEKTKKK   K+   E GD S     +Q+KLRKKV  L
Sbjct: 295  RVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDL 354

Query: 360  IKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRP 539
            IKKQ L AV++IVK Q + +PW QDARAKVGSR+IEL+ QTAY+Q PA+QL + PPDI P
Sbjct: 355  IKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFP 414

Query: 540  AFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKG 719
            AF HT+R VSKE K  S++YG IEC+PL+ KGLERTARHMVIPYMPMLV PVKWT YDKG
Sbjct: 415  AFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKG 474

Query: 720  AYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWA 899
            A+F+LPSYVMRTHGA+QQR+T+KRTP++QL+PVFEALDTLG+ KWRVN +VL+V+DRIW+
Sbjct: 475  AHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWS 534

Query: 900  SGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVAR 1079
             GGRL DLVDR+D+PLPE+P+T+D   +            EN ERHSQRCDIELKL+VAR
Sbjct: 535  CGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVAR 594

Query: 1080 KLKEEEGFFYPHNLDFRG 1133
            K+K+EEGF+YPHN+DFRG
Sbjct: 595  KMKDEEGFYYPHNVDFRG 612


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score =  540 bits (1392), Expect = e-151
 Identities = 265/378 (70%), Positives = 310/378 (82%), Gaps = 1/378 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+ IA+EQE  R  K K AYA YFD LPADMMAVITMHKLMGLLM+GGEHG A
Sbjct: 231  LGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRA 290

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVV-EGGDVSGANALDQDKLRKKVITL 359
            RV QA+C IGDAIEQEVRIH FLEKTKKK   K+   E GD S     +Q+KLRKKV  L
Sbjct: 291  RVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDL 350

Query: 360  IKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRP 539
            IKKQ L AV++IVK Q + +PW QDARAKVGSR+IEL+ QTAY+Q PA+QLA+ PPDI P
Sbjct: 351  IKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFP 410

Query: 540  AFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKG 719
            AF H +R VSKE K  S++YG IEC+PL+ KGLERTARHMVIPYMPMLV PVKWT YDKG
Sbjct: 411  AFTHALRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKG 470

Query: 720  AYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWA 899
            A+F+LPSYVMRTHGA+QQR+T+KRTP++QL+PVFEALDTLG+ KWRVN +VL+V+DRIW+
Sbjct: 471  AHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWS 530

Query: 900  SGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVAR 1079
             GGRL DLVDR+D+PLPE+P+T+D   +            EN ERHSQRCDIELKL+VAR
Sbjct: 531  CGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVAR 590

Query: 1080 KLKEEEGFFYPHNLDFRG 1133
            K+K+EEGF+YPHN+DFRG
Sbjct: 591  KMKDEEGFYYPHNVDFRG 608


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  540 bits (1390), Expect = e-151
 Identities = 261/377 (69%), Positives = 310/377 (82%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+ IA EQ+L ++GK++AAYA YFD LPADMMAVITMHKLMGLLM+G  +G A
Sbjct: 18   LGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSA 77

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVVEGGDVSGANALDQDKLRKKVITLI 362
            RV QA+C IG+AIE EVRI  F+EKTKKK+A  +  +GG  S     +Q+KLRKKV  L+
Sbjct: 78   RVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGG--SNPVTKEQEKLRKKVSMLM 135

Query: 363  KKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRPA 542
            KKQ L+ V+QIVKRQ +S+PW QDA  KVGSRLIEL+++TAY+QPPA+QL +GPPDIRPA
Sbjct: 136  KKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPA 195

Query: 543  FIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKGA 722
            F+HT++ V KE +  +RRYG IECDPL+RKGLE+TARHMVIPYMPMLV P+ WT YDKGA
Sbjct: 196  FVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGA 255

Query: 723  YFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWAS 902
            Y +LPSYVMR HGARQQRE +KR PR+ L+P FEAL+TLG+ KWR+N++VL VIDRIWAS
Sbjct: 256  YLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWAS 315

Query: 903  GGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVARK 1082
            GGRL DLVDR D+PLPEEPDT+D   I            ENSERHSQRCDIELKLAVARK
Sbjct: 316  GGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARK 375

Query: 1083 LKEEEGFFYPHNLDFRG 1133
            +K+E+GFFYPHNLDFRG
Sbjct: 376  MKDEDGFFYPHNLDFRG 392


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  540 bits (1390), Expect = e-151
 Identities = 261/377 (69%), Positives = 310/377 (82%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+ IA EQ+L ++GK++AAYA YFD LPADMMAVITMHKLMGLLM+G  +G A
Sbjct: 186  LGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSA 245

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVVEGGDVSGANALDQDKLRKKVITLI 362
            RV QA+C IG+AIE EVRI  F+EKTKKK+A  +  +GG  S     +Q+KLRKKV  L+
Sbjct: 246  RVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGG--SNPVTKEQEKLRKKVSMLM 303

Query: 363  KKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRPA 542
            KKQ L+ V+QIVKRQ +S+PW QDA  KVGSRLIEL+++TAY+QPPA+QL +GPPDIRPA
Sbjct: 304  KKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPA 363

Query: 543  FIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKGA 722
            F+HT++ V KE +  +RRYG IECDPL+RKGLE+TARHMVIPYMPMLV P+ WT YDKGA
Sbjct: 364  FVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGA 423

Query: 723  YFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWAS 902
            Y +LPSYVMR HGARQQRE +KR PR+ L+P FEAL+TLG+ KWR+N++VL VIDRIWAS
Sbjct: 424  YLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWAS 483

Query: 903  GGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVARK 1082
            GGRL DLVDR D+PLPEEPDT+D   I            ENSERHSQRCDIELKLAVARK
Sbjct: 484  GGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARK 543

Query: 1083 LKEEEGFFYPHNLDFRG 1133
            +K+E+GFFYPHNLDFRG
Sbjct: 544  MKDEDGFFYPHNLDFRG 560


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  531 bits (1367), Expect = e-148
 Identities = 259/379 (68%), Positives = 306/379 (80%), Gaps = 2/379 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+ I +EQEL R GK+KAAYA YFD LPADMM+VITMHKL+GLLM+GGEHG  
Sbjct: 240  LGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGST 299

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDV-VEGGDVSGANALDQDKLRKKVITL 359
            RV QA+C IGDAIEQEVRIH FLEKTK+K   KD  VEGG        +Q+KLRKKV  L
Sbjct: 300  RVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPV-IHEQEKLRKKVTNL 358

Query: 360  IKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPA-NQLAEGPPDIR 536
            +KKQ L A +QIVK    S+PW  +A+AKVGSRLIEL++QTAY+QPP  NQLA+ PPDIR
Sbjct: 359  MKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIR 418

Query: 537  PAFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDK 716
            PAF+HT + V +E K   RR+G IECDPL++KGLERTARHMVIPY+PMLV P+KWT YDK
Sbjct: 419  PAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDK 478

Query: 717  GAYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIW 896
            GA+ +LPSYVMRTHGARQQRE +KR PR QL+PVFEAL+TLG+ KWR+N+++ +V+DRIW
Sbjct: 479  GAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIW 538

Query: 897  ASGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVA 1076
            A GG L DLVDR+D+PLPE+PDT+D   +             NSERHSQRCDIELKLAVA
Sbjct: 539  AGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVA 598

Query: 1077 RKLKEEEGFFYPHNLDFRG 1133
            RK+K+E+GFFYPHNLDFRG
Sbjct: 599  RKMKDEDGFFYPHNLDFRG 617


>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1100

 Score =  518 bits (1334), Expect = e-144
 Identities = 254/382 (66%), Positives = 302/382 (79%), Gaps = 5/382 (1%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR+ I +EQEL R GK +A YA Y D LPADM AVITMHKLMGLLM+GGEHGCA
Sbjct: 238  LGWFEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADMTAVITMHKLMGLLMTGGEHGCA 297

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVVEGGDVSGANALDQDKLRKKVITLI 362
            RV QA+C IGDAIEQEVRIH FLEKTKKK   K   + GD   A   +Q+KLRKKV  LI
Sbjct: 298  RVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNEDEGDKPNAEIKEQEKLRKKVTDLI 357

Query: 363  KKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRPA 542
            KKQ L AV+QIVK Q +++PW QDA+AKVGS LIEL++QTAY+QPPA+QLA+ PPD+RPA
Sbjct: 358  KKQKLPAVRQIVKGQDDTKPWGQDAKAKVGSHLIELLMQTAYIQPPADQLADCPPDVRPA 417

Query: 543  FIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTA-----RHMVIPYMPMLVRPVKWTR 707
            F+H++R V KENK   RRYG IEC+PL+RKGLERT+      H    Y  + V+ VKWT 
Sbjct: 418  FVHSLRTVVKENKKTGRRYGVIECNPLVRKGLERTSMDPCKAHGDSLYANVGVK-VKWTG 476

Query: 708  YDKGAYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVID 887
            YD+GAY ++PSY+MRTHG +QQRE +KRTPR+QL+PVFEALDTLG  KWRVN++VLNV+D
Sbjct: 477  YDRGAYLFIPSYIMRTHGVKQQREAVKRTPRKQLEPVFEALDTLGCTKWRVNKRVLNVVD 536

Query: 888  RIWASGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKL 1067
            RIW SGGRL DLVDR D+PLPE+PD++D  ++            EN ERHS RCD+ELKL
Sbjct: 537  RIWTSGGRLADLVDRKDVPLPEKPDSEDEAVLRKWKWKVRSVKKENRERHSLRCDVELKL 596

Query: 1068 AVARKLKEEEGFFYPHNLDFRG 1133
            AVARK+K+EEGF+YPHNLDFRG
Sbjct: 597  AVARKMKDEEGFYYPHNLDFRG 618


>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
            gi|48716846|dbj|BAD23544.1| putative phage-type RNA
            polymerase [Oryza sativa Japonica Group]
            gi|215694941|dbj|BAG90132.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 951

 Score =  516 bits (1330), Expect = e-144
 Identities = 246/379 (64%), Positives = 311/379 (82%), Gaps = 2/379 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR++I  EQEL+ E  ++A++A+YF++LPADMMAVITMHKLMGLLM+G   G  
Sbjct: 223  LGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSV 282

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHK--DVVEGGDVSGANALDQDKLRKKVIT 356
            RV QA+C IG+AIE EVRIH FLEKTKKK+  +  +  EGGD   A   +Q++LRKKV  
Sbjct: 283  RVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAK--EQERLRKKVTD 340

Query: 357  LIKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIR 536
            L+KKQ +R V+ IVK+Q  S+PW QDA AKVGSRLIEL+++TAY+QPPA+Q A+GPPDIR
Sbjct: 341  LMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIR 400

Query: 537  PAFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDK 716
            PAF H +R V++E +  SRRYG I+CDPL+R+GL+RTA+HMVIPYMPML+ P+ WT YDK
Sbjct: 401  PAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDK 460

Query: 717  GAYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIW 896
            GA+ +LPSYVMRTHGARQQR+ ++R PREQ++ VFEAL+TLGS KWRVN++VL+++DRIW
Sbjct: 461  GAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIW 520

Query: 897  ASGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVA 1076
            +SGGRL DLVDR+D+ LPE+PDT+D   +            ENSERHSQRCD+ELKLAVA
Sbjct: 521  SSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVA 580

Query: 1077 RKLKEEEGFFYPHNLDFRG 1133
            RK+K+E+GF+YPHNLDFRG
Sbjct: 581  RKMKDEDGFYYPHNLDFRG 599


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase [Oryza sativa Japonica
            Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
            sativa Japonica Group]
          Length = 1017

 Score =  516 bits (1330), Expect = e-144
 Identities = 246/379 (64%), Positives = 311/379 (82%), Gaps = 2/379 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR++I  EQEL+ E  ++A++A+YF++LPADMMAVITMHKLMGLLM+G   G  
Sbjct: 223  LGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSV 282

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHK--DVVEGGDVSGANALDQDKLRKKVIT 356
            RV QA+C IG+AIE EVRIH FLEKTKKK+  +  +  EGGD   A   +Q++LRKKV  
Sbjct: 283  RVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAK--EQERLRKKVTD 340

Query: 357  LIKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIR 536
            L+KKQ +R V+ IVK+Q  S+PW QDA AKVGSRLIEL+++TAY+QPPA+Q A+GPPDIR
Sbjct: 341  LMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIR 400

Query: 537  PAFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDK 716
            PAF H +R V++E +  SRRYG I+CDPL+R+GL+RTA+HMVIPYMPML+ P+ WT YDK
Sbjct: 401  PAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDK 460

Query: 717  GAYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIW 896
            GA+ +LPSYVMRTHGARQQR+ ++R PREQ++ VFEAL+TLGS KWRVN++VL+++DRIW
Sbjct: 461  GAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIW 520

Query: 897  ASGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVA 1076
            +SGGRL DLVDR+D+ LPE+PDT+D   +            ENSERHSQRCD+ELKLAVA
Sbjct: 521  SSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVA 580

Query: 1077 RKLKEEEGFFYPHNLDFRG 1133
            RK+K+E+GF+YPHNLDFRG
Sbjct: 581  RKMKDEDGFYYPHNLDFRG 599


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score =  516 bits (1330), Expect = e-144
 Identities = 246/379 (64%), Positives = 311/379 (82%), Gaps = 2/379 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR++I  EQEL+ E  ++A++A+YF++LPADMMAVITMHKLMGLLM+G   G  
Sbjct: 189  LGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSV 248

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHK--DVVEGGDVSGANALDQDKLRKKVIT 356
            RV QA+C IG+AIE EVRIH FLEKTKKK+  +  +  EGGD   A   +Q++LRKKV  
Sbjct: 249  RVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAK--EQERLRKKVTD 306

Query: 357  LIKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIR 536
            L+KKQ +R V+ IVK+Q  S+PW QDA AKVGSRLIEL+++TAY+QPPA+Q A+GPPDIR
Sbjct: 307  LMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIR 366

Query: 537  PAFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDK 716
            PAF H +R V++E +  SRRYG I+CDPL+R+GL+RTA+HMVIPYMPML+ P+ WT YDK
Sbjct: 367  PAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDK 426

Query: 717  GAYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIW 896
            GA+ +LPSYVMRTHGARQQR+ ++R PREQ++ VFEAL+TLGS KWRVN++VL+++DRIW
Sbjct: 427  GAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIW 486

Query: 897  ASGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVA 1076
            +SGGRL DLVDR+D+ LPE+PDT+D   +            ENSERHSQRCD+ELKLAVA
Sbjct: 487  SSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVA 546

Query: 1077 RKLKEEEGFFYPHNLDFRG 1133
            RK+K+E+GF+YPHNLDFRG
Sbjct: 547  RKMKDEDGFYYPHNLDFRG 565


>gb|EPS71577.1| hypothetical protein M569_03175, partial [Genlisea aurea]
          Length = 966

 Score =  516 bits (1329), Expect = e-144
 Identities = 250/377 (66%), Positives = 296/377 (78%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR KIAEEQE IR GK+K+ YAKYFD LPADMMAVI MHKLMGLLM+GGEHG  
Sbjct: 173  LGWFEPLRKKIAEEQEAIRNGKNKSTYAKYFDRLPADMMAVIAMHKLMGLLMTGGEHGVV 232

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVVEGGDVSGANALDQDKLRKKVITLI 362
            RV  A+CTIGDAIEQE RIHYFLEKTKKK    D VE  +   A+  ++ KL ++V TL+
Sbjct: 233  RVVLAACTIGDAIEQEARIHYFLEKTKKKKTGNDAVEEPEKLKADRDEEQKLHRRVTTLM 292

Query: 363  KKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRPA 542
            KKQ  RA+ QIVK    SQPWS + RAKVGSRLIELI+QTAY+Q PA+  ++ PP++RPA
Sbjct: 293  KKQKPRAMIQIVKTHVASQPWSVEGRAKVGSRLIELIIQTAYIQSPADPDSDSPPEVRPA 352

Query: 543  FIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKGA 722
            FIHT R V +E K  +RRYG ++CDPL+ KGLE+ ARHMVIPYMPMLV PV WT YDKG 
Sbjct: 353  FIHTSRTVCRE-KRQTRRYGVVQCDPLVHKGLEKAARHMVIPYMPMLVPPVNWTGYDKGG 411

Query: 723  YFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWAS 902
            Y +LPS VMRTHGA+QQRE +KR PREQL PV+EALDTLG+  WRVN++V ++++RIW S
Sbjct: 412  YLFLPSQVMRTHGAKQQREAVKRVPREQLYPVYEALDTLGTTGWRVNKRVFSIVERIWGS 471

Query: 903  GGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVARK 1082
            GG L  +VDR+DI  PE+P+T+D TL+            ENSE+HS RCD ELKLAVARK
Sbjct: 472  GGNLAGMVDRNDIAFPEQPETEDETLLKKWKWKVRVVKKENSEKHSLRCDTELKLAVARK 531

Query: 1083 LKEEEGFFYPHNLDFRG 1133
            LK+E+GFFYPHNLDFRG
Sbjct: 532  LKDEDGFFYPHNLDFRG 548


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score =  516 bits (1328), Expect = e-144
 Identities = 246/378 (65%), Positives = 310/378 (82%), Gaps = 1/378 (0%)
 Frame = +3

Query: 3    LGWFEPLRNKIAEEQELIREGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMSGGEHGCA 182
            LGWFEPLR++I  EQ+L+ E +++A++A+YF++LPADMMAVITMHKLMGLLM+G   G  
Sbjct: 45   LGWFEPLRDQIIAEQDLVCERRARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSV 104

Query: 183  RVTQASCTIGDAIEQEVRIHYFLEKTKKKTAHKDVVEGGDVSGAN-ALDQDKLRKKVITL 359
            RV QA+C IG+AIE EVR+H FLEK KKK + K++    +V  ++ A +Q++LRKKV  L
Sbjct: 105  RVIQAACQIGEAIEHEVRLHKFLEKPKKKRS-KEMDNEEEVGCSDIAKEQERLRKKVTDL 163

Query: 360  IKKQNLRAVKQIVKRQTESQPWSQDARAKVGSRLIELILQTAYVQPPANQLAEGPPDIRP 539
            +KK  LR V+ IVK+Q  S+PW QD  AKVGSRLIEL+++TAY+QPPA+Q A+GPPDIRP
Sbjct: 164  MKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIRP 223

Query: 540  AFIHTIRIVSKENKNYSRRYGAIECDPLIRKGLERTARHMVIPYMPMLVRPVKWTRYDKG 719
            AF H +R V+KE +  SRRYG I+CDPL+R+GL+RTA+HMVIPYMPML+ P+ WT YDKG
Sbjct: 224  AFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKG 283

Query: 720  AYFYLPSYVMRTHGARQQRETLKRTPREQLKPVFEALDTLGSVKWRVNRKVLNVIDRIWA 899
            A+ +LPSYVMRTHGARQQRE +KR PREQ++ VFEALDTLGS KWRVN++VL+++DRIW+
Sbjct: 284  AHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWS 343

Query: 900  SGGRLGDLVDRSDIPLPEEPDTKDGTLIAXXXXXXXXXXXENSERHSQRCDIELKLAVAR 1079
            SGGRL DLVDRSD+ LPE+PDT+D   +            ENSERHSQRCD+ELKLAVAR
Sbjct: 344  SGGRLADLVDRSDVALPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVAR 403

Query: 1080 KLKEEEGFFYPHNLDFRG 1133
            K+K+EEGF+YPHNLDFRG
Sbjct: 404  KMKDEEGFYYPHNLDFRG 421