BLASTX nr result

ID: Mentha24_contig00040258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00040258
         (386 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16022.3| unnamed protein product [Vitis vinifera]               74   3e-11
gb|EYU38452.1| hypothetical protein MIMGU_mgv1a001186mg [Mimulus...    69   9e-10
ref|XP_006379033.1| hypothetical protein POPTR_0009s04520g [Popu...    63   4e-08
ref|XP_004506322.1| PREDICTED: mediator of RNA polymerase II tra...    59   9e-07
ref|XP_006345324.1| PREDICTED: trithorax group protein osa-like ...    57   4e-06

>emb|CBI16022.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
 Frame = -1

Query: 380  SPGRDSLGSPSRRFGGPSNFPRGSSAFEDINSREALQFGEGSRPFNLSSELVRNPFRDGR 201
            SP R+  G P R FGG S  P   S  +DI+ RE+ +FGEGS+ FNL S+       + R
Sbjct: 1393 SPTREFSGIPHRGFGGLSGVPGRQSDLDDIDGRESRRFGEGSKTFNLPSD-------ESR 1445

Query: 200  FPPLPGHLGRGDIDDPGNLRFGE----HRAPGFLHNQIXXXXXXXXXXXGHLMKGKFSGP 33
            FP LP HL RG+++ PG L   +      AP   H+              HL +G+  G 
Sbjct: 1446 FPVLPSHLRRGELEGPGELVMADPIASRPAP---HHLRGGDLIGQDILPSHLQRGEHFGS 1502

Query: 32   GYISGHFNMG 3
              I G    G
Sbjct: 1503 RNIPGQLRFG 1512


>gb|EYU38452.1| hypothetical protein MIMGU_mgv1a001186mg [Mimulus guttatus]
          Length = 870

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 51/126 (40%), Positives = 63/126 (50%)
 Frame = -1

Query: 380  SPGRDSLGSPSRRFGGPSNFPRGSSAFEDINSREALQFGEGSRPFNLSSELVRNPFRDGR 201
            SP R+   S  R FGGPS+  R +S F+D  SREA +FGEGSR  NLSS+     FRDGR
Sbjct: 740  SPDREY--SSPRGFGGPSSLSRNTSTFDD--SREAHRFGEGSRSSNLSSD----SFRDGR 791

Query: 200  FPPLPGHLGRGDIDDPGNLRFGEHRAPGFLHNQIXXXXXXXXXXXGHLMKGKFSGPGYIS 21
            FP   GH  R   D PG+   G +  PG+ H                    + +G G  S
Sbjct: 792  FPSFSGHPPR---DGPGHPMRG-NSGPGYFHTD------------------ENAGSGAFS 829

Query: 20   GHFNMG 3
            GH  +G
Sbjct: 830  GHGRVG 835


>ref|XP_006379033.1| hypothetical protein POPTR_0009s04520g [Populus trichocarpa]
            gi|550331020|gb|ERP56830.1| hypothetical protein
            POPTR_0009s04520g [Populus trichocarpa]
          Length = 1315

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/126 (33%), Positives = 58/126 (46%)
 Frame = -1

Query: 380  SPGRDSLGSPSRRFGGPSNFPRGSSAFEDINSREALQFGEGSRPFNLSSELVRNPFRDGR 201
            SP RD  G P+RRFG            +DI+ R+  +FG+       SS L     RD R
Sbjct: 1087 SPVRDYPGMPTRRFGA-------LPGLDDIDGRDPHRFGD-----KFSSSL-----RDSR 1129

Query: 200  FPPLPGHLGRGDIDDPGNLRFGEHRAPGFLHNQIXXXXXXXXXXXGHLMKGKFSGPGYIS 21
            FP  P HL RG+++ PGNL  GEH +   + +              HL +G+  GP  + 
Sbjct: 1130 FPVFPSHLRRGELEGPGNLHMGEHLSGDLMGHD---------GRPAHLRRGEHLGPRNLP 1180

Query: 20   GHFNMG 3
             H  +G
Sbjct: 1181 SHLWVG 1186


>ref|XP_004506322.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like isoform X1 [Cicer arietinum]
            gi|502146144|ref|XP_004506323.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like isoform
            X2 [Cicer arietinum] gi|502146146|ref|XP_004506324.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12-like isoform X3 [Cicer arietinum]
          Length = 1283

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/126 (32%), Positives = 51/126 (40%)
 Frame = -1

Query: 380  SPGRDSLGSPSRRFGGPSNFPRGSSAFEDINSREALQFGEGSRPFNLSSELVRNPFRDGR 201
            SPG + +  PSRR G  S      S  +D + R A ++G+           V   FRDGR
Sbjct: 1029 SPGSEYIDMPSRRSGPLSGGLVSKSGIDDFDGRTASRYGDS----------VGIAFRDGR 1078

Query: 200  FPPLPGHLGRGDIDDPGNLRFGEHRAPGFLHNQIXXXXXXXXXXXGHLMKGKFSGPGYIS 21
            FP  P HL R   D  GN R GEH   G                 GH  +G+  GP    
Sbjct: 1079 FPHQPSHLHRDAFDGFGNFRMGEHPRRG--------NFIGRDEFSGHFQRGEHLGPHNFP 1130

Query: 20   GHFNMG 3
             H  +G
Sbjct: 1131 RHLQLG 1136


>ref|XP_006345324.1| PREDICTED: trithorax group protein osa-like isoform X1 [Solanum
            tuberosum]
          Length = 1049

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 37/105 (35%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
 Frame = -1

Query: 320  PRG---SSAFEDINSREALQFGEGSRPFNLSSELVRNPFRDGRFPPLPGHLGRGDIDDPG 150
            PRG    S F+DI  RE  QF EG   FNL S L    + +GRF  LPGH    + D  G
Sbjct: 792  PRGFVSHSGFDDIGGREPRQFIEGPGHFNLPSNLAGGLYSNGRFQALPGHPHGVETDGLG 851

Query: 149  NLRFGEHRAPGFLHNQIXXXXXXXXXXXGHLMKGKFSGPGYISGH 15
            +LR GEH   G  +  +            HL   +   P  +  H
Sbjct: 852  DLRGGEHTTFGRPYKHVQSGDLFGKDMPSHLHHDESLDPPKLPSH 896


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