BLASTX nr result

ID: Mentha24_contig00039479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00039479
         (383 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU31145.1| hypothetical protein MIMGU_mgv1a020597mg, partial...    81   1e-13
ref|XP_002533810.1| nuclear receptor binding set domain containi...    65   8e-09
gb|EYU24079.1| hypothetical protein MIMGU_mgv1a000797mg [Mimulus...    61   1e-07
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...    57   2e-06

>gb|EYU31145.1| hypothetical protein MIMGU_mgv1a020597mg, partial [Mimulus guttatus]
          Length = 1336

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 52/103 (50%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
 Frame = +1

Query: 88   SSERAEVVHILDL-PSPTPM----NQSLQKSAVLELLSPAPRLNDENEAALATTETKASG 252
            SS + + V +LDL PSPTP     N  LQ   +LELLS APR NDE+E       TK SG
Sbjct: 966  SSRQRKDVDVLDLLPSPTPKTAAENPVLQNCGILELLSLAPRSNDEDE-------TKQSG 1018

Query: 253  PVSNSGMGWNCNVQLPEVADEWCGYSPTPVKPSIQEWDPGLLS 381
             + +   G + N+    VADEWCGYSPTP K  +QEWD GL+S
Sbjct: 1019 CIKSPTNGGS-NIG---VADEWCGYSPTPGKTDLQEWDSGLVS 1057


>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
            putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
            nuclear receptor binding set domain containing protein 1,
            nsd, putative [Ricinus communis]
          Length = 1586

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
 Frame = +1

Query: 67   AILEQPQSSERAEVVHILDLPSPTPMNQSLQKSAVLELLSPAPRLNDENEAALATTETKA 246
            ++ +  + SE+ + + + DLPSPTP      K +  EL   A     EN+ +++     +
Sbjct: 1079 SMAKSSEKSEQNQEIVVSDLPSPTP------KQSHEELKGQA-----ENKLSVS-----S 1122

Query: 247  SGPVSNSGMGWN------CNVQLPEVADEWCGYSPTPVKPSIQEWDPGLLS 381
            S PV +SG  W+         QLPEVA EW GYSP   KPS++EWD  L+S
Sbjct: 1123 SAPVQDSGPSWSTASSLVVGRQLPEVAGEWGGYSPASAKPSVEEWDSNLVS 1173


>gb|EYU24079.1| hypothetical protein MIMGU_mgv1a000797mg [Mimulus guttatus]
          Length = 983

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +1

Query: 130 SPTPMNQSLQKSAVLELLSPAPRLNDENEAALATTETKASGPVSNSGMGWNCNVQLPEVA 309
           +P   N  LQ S +LELLSP     D+++A         + PV N+G  W      PEVA
Sbjct: 638 APVSTNFPLQNSGILELLSP----KDDHKATEKPPPGLPNFPVPNAGPSWT-----PEVA 688

Query: 310 DEWCGYSPTPVKP-SIQEWDPGLLS 381
           +EWCGY+ TP KP +   WD  L+S
Sbjct: 689 NEWCGYASTPAKPCAADAWDSDLVS 713


>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
            vinifera]
          Length = 1643

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 14/101 (13%)
 Frame = +1

Query: 121  DLPSPTPMNQSLQKSAVLE---LLSPAPRLND---ENEAALATTETKASGPVSNSGMGWN 282
            D+ S   ++++L++   +    L SP P+ +D   + +AA +     +  PV +SG  W+
Sbjct: 1191 DVVSVAKLSKTLEQDHDINFPNLPSPTPKPSDGDWKGQAAESKQSVSSDVPVQDSGPSWS 1250

Query: 283  C-------NVQLPEVADEWCGYS-PTPVKPSIQEWDPGLLS 381
                      +LPEVA +W GYS PTP+KPS++EWD  L S
Sbjct: 1251 TASSLVGGGTKLPEVASDWGGYSSPTPMKPSVEEWDSTLAS 1291


Top