BLASTX nr result
ID: Mentha24_contig00039397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00039397
(552 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus... 278 5e-73
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 277 1e-72
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 275 5e-72
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 260 2e-67
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 258 7e-67
ref|XP_007015597.1| BSD domain (BTF2-like transcription factors,... 234 8e-60
ref|XP_007015596.1| BSD domain (BTF2-like transcription factors,... 234 8e-60
ref|XP_007015595.1| BSD domain (BTF2-like transcription factors,... 234 8e-60
ref|XP_007015594.1| BSD domain (BTF2-like transcription factors,... 234 8e-60
ref|XP_007015593.1| BSD domain (BTF2-like transcription factors,... 234 8e-60
ref|XP_007015592.1| BSD domain (BTF2-like transcription factors,... 234 8e-60
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 234 1e-59
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun... 226 3e-57
gb|EXB51046.1| hypothetical protein L484_023748 [Morus notabilis] 224 8e-57
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr... 223 2e-56
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 223 2e-56
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps... 222 4e-56
ref|NP_175971.3| probable RNA polymerase II transcription factor... 221 7e-56
ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transc... 221 1e-55
ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 221 1e-55
>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
Length = 409
Score = 278 bits (712), Expect = 5e-73
Identities = 135/181 (74%), Positives = 156/181 (86%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KPLSDGQSN+VTFNLTPEIIHQIF+EKPAVRQAYLNFVP +++EK+FWTKYS+A+YL+S+
Sbjct: 5 KPLSDGQSNKVTFNLTPEIIHQIFSEKPAVRQAYLNFVPHRLSEKDFWTKYSKAEYLNSS 64
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
RNV VFLKRDDMLA+EARRK+RRVDPTVD++ADEGDDYIHL DHGL+
Sbjct: 65 RNVSVAAAEAALDEELAVFLKRDDMLADEARRKVRRVDPTVDMQADEGDDYIHLQDHGLV 124
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
H E KD ++SQYEP+R+SFSQDLNQH AVVLQGRV+D EL DTRSVAEA+ R KQ ELSD
Sbjct: 125 HDEPKDYMESQYEPFRKSFSQDLNQHGAVVLQGRVLDAELRDTRSVAEAIIRIKQAELSD 184
Query: 543 E 545
E
Sbjct: 185 E 185
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum lycopersicum]
Length = 599
Score = 277 bits (709), Expect = 1e-72
Identities = 135/181 (74%), Positives = 153/181 (84%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KM+EKEFWTKYSRA+YLHST
Sbjct: 187 KPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHST 246
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N+V VFLK+DDML +EARRKIRRVDPT+D+EADEGDDY+HLPDHGL
Sbjct: 247 KNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLP 306
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
GE K++L+ QYEP++RSFSQ LNQHAAVVLQGRV+DVELGDTRSVAEA R Q E +
Sbjct: 307 QGETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVAEAFTRTNQAEQAT 366
Query: 543 E 545
E
Sbjct: 367 E 367
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum tuberosum]
Length = 599
Score = 275 bits (703), Expect = 5e-72
Identities = 134/181 (74%), Positives = 153/181 (84%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KM+EKEFWTKYSRA+YLHST
Sbjct: 187 KPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHST 246
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N+V VFLK+DDML +EARRKIRRVDPT+D+EADEGDDY+HLPDHGL
Sbjct: 247 KNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLP 306
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
GE K++L+ QYEP++RSFSQ LNQHAAVVL+GRV+DVELGDTRSVAEA R Q E +
Sbjct: 307 QGETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTYQAEQAT 366
Query: 543 E 545
E
Sbjct: 367 E 367
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Vitis vinifera]
gi|296090002|emb|CBI39821.3| unnamed protein product
[Vitis vinifera]
Length = 602
Score = 260 bits (664), Expect = 2e-67
Identities = 124/182 (68%), Positives = 150/182 (82%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+LNFVP KMTEK+FW KY RA+YLH T
Sbjct: 190 KPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCT 249
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
RN V VFLK DD+LANEARRKIRRVDPT+D+EAD+GDDY+HLPDHG+
Sbjct: 250 RNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIF 309
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
+K+++D QYE YRR+ SQDLN+HAAVVL+GR +DVEL DTR+VAEAL ++K+ E ++
Sbjct: 310 RDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAAN 369
Query: 543 EK 548
EK
Sbjct: 370 EK 371
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 258 bits (659), Expect = 7e-67
Identities = 123/182 (67%), Positives = 150/182 (82%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+LNFVP KMTEK+FW KY RA+YLH T
Sbjct: 233 KPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCT 292
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
RN V VFLK DD+LA+EARRKIRRVDPT+D+EAD+GDDY+HLPDHG+
Sbjct: 293 RNTVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIF 352
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
+K+++D QYE YRR+ SQDLN+HAAVVL+GR +DVEL DTR+VAEAL ++K+ E ++
Sbjct: 353 RDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAAN 412
Query: 543 EK 548
EK
Sbjct: 413 EK 414
>ref|XP_007015597.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins) isoform 6 [Theobroma
cacao] gi|508785960|gb|EOY33216.1| BSD domain (BTF2-like
transcription factors, Synapse-associated proteins and
DOS2-like proteins) isoform 6 [Theobroma cacao]
Length = 467
Score = 234 bits (598), Expect = 8e-60
Identities = 113/176 (64%), Positives = 143/176 (81%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHST
Sbjct: 185 KPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHST 244
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N V VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 245 KNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIF 304
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQD 530
+K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVAEAL R+KQ+
Sbjct: 305 RDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQE 360
>ref|XP_007015596.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins), putative isoform 5,
partial [Theobroma cacao] gi|508785959|gb|EOY33215.1|
BSD domain (BTF2-like transcription factors,
Synapse-associated proteins and DOS2-like proteins),
putative isoform 5, partial [Theobroma cacao]
Length = 481
Score = 234 bits (598), Expect = 8e-60
Identities = 113/176 (64%), Positives = 143/176 (81%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHST
Sbjct: 185 KPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHST 244
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N V VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 245 KNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIF 304
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQD 530
+K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVAEAL R+KQ+
Sbjct: 305 RDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQE 360
>ref|XP_007015595.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins) isoform 4, partial
[Theobroma cacao] gi|508785958|gb|EOY33214.1| BSD domain
(BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins) isoform 4, partial
[Theobroma cacao]
Length = 516
Score = 234 bits (598), Expect = 8e-60
Identities = 113/176 (64%), Positives = 143/176 (81%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHST
Sbjct: 141 KPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHST 200
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N V VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 201 KNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIF 260
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQD 530
+K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVAEAL R+KQ+
Sbjct: 261 RDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQE 316
>ref|XP_007015594.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins) isoform 3 [Theobroma
cacao] gi|508785957|gb|EOY33213.1| BSD domain (BTF2-like
transcription factors, Synapse-associated proteins and
DOS2-like proteins) isoform 3 [Theobroma cacao]
Length = 549
Score = 234 bits (598), Expect = 8e-60
Identities = 113/176 (64%), Positives = 143/176 (81%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHST
Sbjct: 185 KPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHST 244
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N V VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 245 KNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIF 304
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQD 530
+K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVAEAL R+KQ+
Sbjct: 305 RDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQE 360
>ref|XP_007015593.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins) isoform 2, partial
[Theobroma cacao] gi|508785956|gb|EOY33212.1| BSD domain
(BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins) isoform 2, partial
[Theobroma cacao]
Length = 505
Score = 234 bits (598), Expect = 8e-60
Identities = 113/176 (64%), Positives = 143/176 (81%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHST
Sbjct: 141 KPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHST 200
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N V VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 201 KNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIF 260
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQD 530
+K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVAEAL R+KQ+
Sbjct: 261 RDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQE 316
>ref|XP_007015592.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins), putative isoform 1
[Theobroma cacao] gi|508785955|gb|EOY33211.1| BSD domain
(BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins), putative isoform 1
[Theobroma cacao]
Length = 646
Score = 234 bits (598), Expect = 8e-60
Identities = 113/176 (64%), Positives = 143/176 (81%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHST
Sbjct: 185 KPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHST 244
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N V VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 245 KNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIF 304
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQD 530
+K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVAEAL R+KQ+
Sbjct: 305 RDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQE 360
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 234 bits (597), Expect = 1e-59
Identities = 115/181 (63%), Positives = 144/181 (79%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
+PL+DG++N+VTF+LTPEIIHQIFAEKPAV QA+L FVP KM+E++FWTKY RA+YLH T
Sbjct: 194 RPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKYCRAEYLHRT 253
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N V VFLK DD+LA+EARRKIRRVDPTVD+ AD GDDY HLP HG+L
Sbjct: 254 KNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDYSHLPGHGIL 313
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
+K+ +DS+ E +R+ QDLN+HAAVVL+GR +DVELGDTR+VAEAL R+KQ E++
Sbjct: 314 RDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEALARSKQAEVAT 373
Query: 543 E 545
E
Sbjct: 374 E 374
>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
gi|462419824|gb|EMJ24087.1| hypothetical protein
PRUPE_ppa003591mg [Prunus persica]
Length = 563
Score = 226 bits (576), Expect = 3e-57
Identities = 113/181 (62%), Positives = 139/181 (76%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP++DG+ N+VTFNLTPEI +QIFA KPAV QA+L VP KMTEK+FWTKY RA+YLHST
Sbjct: 159 KPMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYFRAEYLHST 218
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
RN V +FLK D +LA+EARRKIRRVDPT+D+EAD+GDDY HLPDHG+
Sbjct: 219 RNAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYTHLPDHGIF 278
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
+KDV + Q E YRR+ SQDLN+ AVVLQGR VDV+L D R+VAEAL +++++ SD
Sbjct: 279 RDGSKDVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEALMQSRRE--SD 336
Query: 543 E 545
E
Sbjct: 337 E 337
>gb|EXB51046.1| hypothetical protein L484_023748 [Morus notabilis]
Length = 557
Score = 224 bits (572), Expect = 8e-57
Identities = 109/182 (59%), Positives = 139/182 (76%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP++DG++N+VTFNLTPEI +QIF KPAV QA+LN VP KMTEK+FWTKY RA+YLHST
Sbjct: 159 KPMADGRTNKVTFNLTPEIKYQIFVLKPAVHQAFLNLVPSKMTEKDFWTKYFRAEYLHST 218
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N + +FLK D++LA EARRKIRRVDPT+D+EAD GDDY HLPDHG+
Sbjct: 219 KNAITVAAEAAEDEELAIFLKEDNILAREARRKIRRVDPTLDMEADLGDDYTHLPDHGIF 278
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
K++ ++Q+E Y R+ SQDLN+ AVVL+GR VDV+L D R+VAEAL R++Q EL
Sbjct: 279 RDGTKEISETQHEQYMRTLSQDLNRQGAVVLEGRTVDVDLEDPRTVAEALVRSRQ-ELDG 337
Query: 543 EK 548
+K
Sbjct: 338 DK 339
>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
gi|557089185|gb|ESQ29893.1| hypothetical protein
EUTSA_v10011333mg [Eutrema salsugineum]
Length = 597
Score = 223 bits (568), Expect = 2e-56
Identities = 111/180 (61%), Positives = 137/180 (76%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++NRVTFNLT EII QIFAEKPAVRQA++N+VP KMTEK+FWTKY RA+YL+ST
Sbjct: 186 KPSTDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYST 245
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N VFLK D++LA E R+KIRRVDPT+D+EAD+GDDY HL DHG+
Sbjct: 246 KNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYSHLMDHGIQ 305
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
KDV++SQ + +RRS QDLN+H+AVVL+GR +DVE DTR VAEAL R KQ +D
Sbjct: 306 RDGTKDVVESQNDQFRRSLLQDLNRHSAVVLEGRSIDVESEDTRVVAEALTRAKQVSKAD 365
>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
Length = 592
Score = 223 bits (568), Expect = 2e-56
Identities = 111/180 (61%), Positives = 136/180 (75%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++N+VP KMTEK+FWTKY RA+YL+ST
Sbjct: 185 KPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYST 244
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N VFLK D++LA E R+KIRRVDPT+D+EAD+GDDY HL DHG+
Sbjct: 245 KNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYTHLMDHGIQ 304
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
DV++ Q + +RRS QDLN+HAAVVL+GR +DVE DTR VAEAL R KQ +D
Sbjct: 305 RDGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKAD 364
>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
gi|482575779|gb|EOA39966.1| hypothetical protein
CARUB_v10008654mg [Capsella rubella]
Length = 593
Score = 222 bits (566), Expect = 4e-56
Identities = 110/180 (61%), Positives = 137/180 (76%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++++VP KMTEK+FWTKY RA+YL+ST
Sbjct: 185 KPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFISYVPSKMTEKDFWTKYFRAEYLYST 244
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N VFLK D++LA E R+KIRRVDPT+D+EADEGDDY HL DHG+
Sbjct: 245 KNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDYTHLMDHGIQ 304
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
+DV++ Q E ++RS QDLN+HAAVVL+GR +DV+ DTR VAEAL R KQ +D
Sbjct: 305 RDGTRDVVEPQNEQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIVAEALTRVKQVSKAD 364
>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
[Arabidopsis thaliana]
gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| probable RNA polymerase II
transcription factor B subunit 1-1 [Arabidopsis
thaliana]
Length = 591
Score = 221 bits (564), Expect = 7e-56
Identities = 110/180 (61%), Positives = 135/180 (75%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++N+VP KMTEK+FWTKY RA+YL+ST
Sbjct: 185 KPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYST 244
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N VFLK D++LA E R KIRRVDPT+D+EAD+GDDY HL DHG+
Sbjct: 245 KNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMDHGIQ 304
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQDELSD 542
DV++ Q + ++RS QDLN+HAAVVL+GR +DVE DTR VAEAL R KQ +D
Sbjct: 305 RDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKAD 364
>ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Oryza brachyantha]
Length = 621
Score = 221 bits (562), Expect = 1e-55
Identities = 107/176 (60%), Positives = 139/176 (78%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
+P +DG++N+VTF+LT EIIHQIFAEKPAV +A+LNFVP+KM+EK+FWTKY RA+YL T
Sbjct: 212 RPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLNFVPKKMSEKDFWTKYFRAEYLLRT 271
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
+N V VFLK DD+LA EAR KI+RVDPT+D+EAD GDDYIHLPDHG++
Sbjct: 272 KNTVAAAAEAAEDEELAVFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHGII 331
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALFRNKQD 530
+K+ +++ E RR+ SQDLN+HAAVVL+GR DVEL DT++VAEAL R+K++
Sbjct: 332 RDGSKETIENDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEALARSKRE 387
>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
communis] gi|223529828|gb|EEF31761.1| TFIIH basal
transcription factor complex subunit, putative [Ricinus
communis]
Length = 597
Score = 221 bits (562), Expect = 1e-55
Identities = 106/176 (60%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Frame = +3
Query: 3 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 182
KPL DGQ+N+VTFNLTPEI+ +IFAEKPAV QAYL+ VP KM+E++FWTKY RA+YL +
Sbjct: 185 KPLIDGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKMSERDFWTKYCRAEYLQRS 244
Query: 183 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 362
RN+ +FLK DD+LA+E R+KIR VDPT+D+EAD+GDDY HLPDHG++
Sbjct: 245 RNIHAAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLDMEADQGDDYTHLPDHGIV 304
Query: 363 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVE-LGDTRSVAEALFRNKQ 527
+KDV++SQ+EPYRR+ QDLN+HAAVVL+G +D E L DT++VA+AL R+K+
Sbjct: 305 RDGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVADALARSKR 360