BLASTX nr result

ID: Mentha24_contig00038410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00038410
         (384 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352157.1| PREDICTED: proteinaceous RNase P 1, chloropl...    66   4e-09
ref|XP_006352156.1| PREDICTED: proteinaceous RNase P 1, chloropl...    66   4e-09
ref|XP_004242933.1| PREDICTED: proteinaceous RNase P 1, chloropl...    57   2e-06

>ref|XP_006352157.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X2 [Solanum
           tuberosum]
          Length = 753

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 44/127 (34%), Positives = 64/127 (50%)
 Frame = -3

Query: 382 SAAAGVVQPAKSGSRTRTLXXXXXXXXXXXXXDIVEMVNCGSFSLINGEEDLSSYGNGCL 203
           SAA G++ PAKSGS +RTL                   N   F++I+ +  L        
Sbjct: 179 SAATGLIHPAKSGSGSRTLNAPNEPSSHN---------NSNEFNVIDHDSHL-------- 221

Query: 202 DISGLSLDGFVQSMKKAAXXXXXXXXXXXSDGIQVSKEMKRVALKKGFEIYKEMGLEKVP 23
            +   ++D FVQ MK +A             GI+VS++++  AL +GFEIY++M  +KV 
Sbjct: 222 -LGSSTVDEFVQFMKSSAKRCNLQSVRHDDSGIKVSEDVRHYALTRGFEIYEKMLSDKVQ 280

Query: 22  MNEATFT 2
           MNEAT T
Sbjct: 281 MNEATLT 287


>ref|XP_006352156.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X1 [Solanum
           tuberosum]
          Length = 782

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 44/127 (34%), Positives = 64/127 (50%)
 Frame = -3

Query: 382 SAAAGVVQPAKSGSRTRTLXXXXXXXXXXXXXDIVEMVNCGSFSLINGEEDLSSYGNGCL 203
           SAA G++ PAKSGS +RTL                   N   F++I+ +  L        
Sbjct: 179 SAATGLIHPAKSGSGSRTLNAPNEPSSHN---------NSNEFNVIDHDSHL-------- 221

Query: 202 DISGLSLDGFVQSMKKAAXXXXXXXXXXXSDGIQVSKEMKRVALKKGFEIYKEMGLEKVP 23
            +   ++D FVQ MK +A             GI+VS++++  AL +GFEIY++M  +KV 
Sbjct: 222 -LGSSTVDEFVQFMKSSAKRCNLQSVRHDDSGIKVSEDVRHYALTRGFEIYEKMLSDKVQ 280

Query: 22  MNEATFT 2
           MNEAT T
Sbjct: 281 MNEATLT 287


>ref|XP_004242933.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 768

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 45/127 (35%), Positives = 65/127 (51%)
 Frame = -3

Query: 382 SAAAGVVQPAKSGSRTRTLXXXXXXXXXXXXXDIVEMVNCGSFSLINGEEDLSSYGNGCL 203
           SAA G++ PAKSGS  RTL                   N   FSL +   +  S+     
Sbjct: 173 SAATGLIHPAKSGSVNRTL----------------NAPNEQEFSLNDKVIEHDSH----- 211

Query: 202 DISGLSLDGFVQSMKKAAXXXXXXXXXXXSDGIQVSKEMKRVALKKGFEIYKEMGLEKVP 23
            +S  ++D FVQ MK +A            +GI+VS++++  AL +GFEIY++M  +KV 
Sbjct: 212 LLSSSTVDEFVQFMKSSA-----KSVRHDDNGIKVSEDVRHYALTRGFEIYEKMLSDKVQ 266

Query: 22  MNEATFT 2
           +NEAT T
Sbjct: 267 INEATLT 273


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