BLASTX nr result

ID: Mentha24_contig00038393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00038393
         (507 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305933.1| PREDICTED: F-box protein At5g07610-like [Fra...    57   3e-06
ref|XP_007029917.1| F-box family protein, putative [Theobroma ca...    55   8e-06

>ref|XP_004305933.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
           vesca]
          Length = 288

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
 Frame = -1

Query: 486 YFIEVYDSESHTWKLSLGSFTLPREPPMIS--RGVYSNGSIYW-DIDFELCYYNIAKNEF 316
           Y I +Y SE+ +W+L    F      P+++  + VY NG+++W  +D E+ YY+I     
Sbjct: 87  YHIHIYSSETRSWRLLSSCFV---RLPLVNYDQAVYCNGAVHWVGLDNEISYYHIDDERV 143

Query: 315 K-TFSPPDYPPNQDEDLGGFAYDRLEESNGHLYQSRLVSNNKCQSIMLFE-LQVDDDRCW 142
           +  F PP  PP +  +   F Y +      HL+   +  ++    +  FE L++  D   
Sbjct: 144 RNVFYPP--PPPKKRESRMFRYFQESHCGSHLHLIDIYVSH----LTRFEVLEMGRDYSG 197

Query: 141 WLLKYNEVISQHQLTSPSPWSRPPQLRFI--------EGSCSLVYHMCGKISVYS 1
           W LKY+ V    QLT   PW R  Q   +        E S SL+ H  GK+  Y+
Sbjct: 198 WSLKYH-VELDPQLTG-FPWLRWCQFTVLFLVPEEAGELSSSLLLHSPGKVISYN 250


>ref|XP_007029917.1| F-box family protein, putative [Theobroma cacao]
           gi|508718522|gb|EOY10419.1| F-box family protein,
           putative [Theobroma cacao]
          Length = 436

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = -1

Query: 489 TYFIEVYDSESHTWKLSLGSFTLPREPPMISRGVYSNGSIYWD-IDFELCYYNIAKNEFK 313
           TYFI++Y SE+++W  S  +F   +    I R V+ NG+I+WD  D +  Y ++     K
Sbjct: 240 TYFIDIYSSETNSWSASKINFN-SKHNINIDRAVFFNGAIHWDCADTQSWYIDVNNECLK 298

Query: 312 TFSPPDYPPNQDEDLGGFAYDRLEESNGHLYQSRLVSNNKCQ-SIMLFELQVDDDRCWWL 136
           T   P           GF Y R  ES GHL+   +V+    Q    +FE++ D     W 
Sbjct: 299 TMPMPGVH-------SGFRYFR--ESGGHLH--LVVAKGFSQLKFKIFEMETDYSN--WY 345

Query: 135 LKYN 124
           LKYN
Sbjct: 346 LKYN 349


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