BLASTX nr result
ID: Mentha24_contig00038191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00038191
(765 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza] 340 2e-91
gb|EYU40508.1| hypothetical protein MIMGU_mgv1a0199441mg, partia... 299 6e-79
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus... 294 2e-77
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 219 6e-55
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 218 2e-54
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 216 5e-54
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 215 1e-53
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 206 6e-51
gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana] 206 9e-51
ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, par... 204 3e-50
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 200 4e-49
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 200 4e-49
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 197 4e-48
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 196 8e-48
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 196 1e-47
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps... 195 2e-47
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 195 2e-47
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr... 194 2e-47
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 194 2e-47
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun... 193 5e-47
>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
Length = 898
Score = 340 bits (873), Expect = 2e-91
Identities = 174/246 (70%), Positives = 200/246 (81%), Gaps = 2/246 (0%)
Frame = +3
Query: 3 EAYPAGKIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPH 182
E YPA KIVE+GL+VGLRRYRFFVFKDEQ ++SAVKCYFVH DSIS +
Sbjct: 279 EIYPARKIVEEGLIVGLRRYRFFVFKDEQKKAKKNQAEDNKSSHSAVKCYFVHLDSISSN 338
Query: 183 SHEENNVLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIED 362
HEE+ VL KSVSEARRLFMHIHTL++IEKYMAR SLILSKTT+IDLDFAAIIVE IED
Sbjct: 339 DHEEDYVLFRKSVSEARRLFMHIHTLSTIEKYMARLSLILSKTTRIDLDFAAIIVEIIED 398
Query: 363 IPFQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLIQCRL 542
IPFQD +GSII DEDGKPILHTDGTGYIS+DLA+KC K+ +AS HN ++++E LLIQCRL
Sbjct: 399 IPFQDDNGSIIRDEDGKPILHTDGTGYISQDLAMKCSKDFYASMHNTNSTFEPLLIQCRL 458
Query: 543 FHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQE--TFNSLEIVNTRNKANSL 716
FHDGYAVKGTLLVNRKLEPGRIQ+R SMIKVEKD ++++E FNSLEI + N
Sbjct: 459 FHDGYAVKGTLLVNRKLEPGRIQIRPSMIKVEKDHSMESEEILKFNSLEINTISRRPNRN 518
Query: 717 GLREYV 734
L +Y+
Sbjct: 519 FLSKYL 524
>gb|EYU40508.1| hypothetical protein MIMGU_mgv1a0199441mg, partial [Mimulus
guttatus]
Length = 379
Score = 299 bits (766), Expect = 6e-79
Identities = 153/240 (63%), Positives = 189/240 (78%), Gaps = 1/240 (0%)
Frame = +3
Query: 18 GKIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXT-YSAVKCYFVHFDSISPHSHEE 194
G IV++G+ VGLRRY+FFVFKDE+ YSAVKCYFV DSISP+ EE
Sbjct: 83 GNIVKEGIHVGLRRYQFFVFKDERIKVKKKQMEKEKKAIYSAVKCYFVRIDSISPY--EE 140
Query: 195 NNVLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQ 374
+ VL K++SEARRLFMHIHTL++IEKYMARF+LILSKT K+DL+FAA+ +E+IEDIPFQ
Sbjct: 141 DYVLSRKTISEARRLFMHIHTLSTIEKYMARFALILSKTIKLDLNFAAVTIERIEDIPFQ 200
Query: 375 DKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLIQCRLFHDG 554
D++GSI++DEDGKPILHTDGTGYISEDLA KC K+ +K+ + ++E LL+QCRLFHDG
Sbjct: 201 DENGSIVYDEDGKPILHTDGTGYISEDLAKKCPKDFTTAKYITNNNFEPLLMQCRLFHDG 260
Query: 555 YAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRNKANSLGLREYV 734
AVKGTLL+N+KL+PG IQVR SMIKV+KD L N ETFNSLEIV ++ L +Y+
Sbjct: 261 VAVKGTLLINKKLKPGTIQVRPSMIKVDKDPTLPNNETFNSLEIVAISHRPGRNNLSKYL 320
>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus guttatus]
Length = 878
Score = 294 bits (753), Expect = 2e-77
Identities = 144/244 (59%), Positives = 186/244 (76%), Gaps = 1/244 (0%)
Frame = +3
Query: 6 AYPAGKIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXX-TYSAVKCYFVHFDSISPH 182
A+ G I ++G++VGLRRYRFFVFKD++ TYS V+C+FV DS+SP
Sbjct: 189 AFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRCFFVRVDSVSPS 248
Query: 183 SHEENNVLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIED 362
++EN +L K++ EARR+FMHIHT++SIEK MAR SLILSK+ K++++ AA+I+EKI+D
Sbjct: 249 GYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEINLAAVIIEKIKD 308
Query: 363 IPFQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLIQCRL 542
IPFQD+ G +IHDEDGKPILHTDGTGYISEDLAI+C A K+ D +E LL+QCR+
Sbjct: 309 IPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDDRFEPLLVQCRI 368
Query: 543 FHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRNKANSLGL 722
FH+GYAVKGTLLVNRKLEPG IQ+R SMIKVE+D ++ +E FNSLEIVN +K L
Sbjct: 369 FHEGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDHNIKVEEAFNSLEIVNISHKPGRNCL 428
Query: 723 REYV 734
+Y+
Sbjct: 429 SKYL 432
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 219 bits (559), Expect = 6e-55
Identities = 121/248 (48%), Positives = 163/248 (65%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
KI +G+ VGLR+YRFFVFKD S+VKCYFV +S +
Sbjct: 237 KIAREGIFVGLRQYRFFVFKD------GGKEEKKKNPTSSVKCYFVFMES---------S 281
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
L K+V EAR +FMH H ++S+ KYMARFSLILSKT K+D+D + + +++I+D P +D+
Sbjct: 282 ALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDE 341
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLIQCRLFHDGYA 560
DG +++DED KP++ TDGTG+ISEDLA++C L K+ + + + LLIQCRLF++G A
Sbjct: 342 DGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSDPLLIQCRLFNNGCA 401
Query: 561 VKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRNKANSLGLREYVEM 740
VKGTLL+NRKL P IQ+R SMIKVE D KL + +T NS+EI T N+ R Y+
Sbjct: 402 VKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPR----RSYLSK 457
Query: 741 TLIEELIY 764
LI L Y
Sbjct: 458 YLIALLSY 465
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 218 bits (554), Expect = 2e-54
Identities = 128/272 (47%), Positives = 165/272 (60%), Gaps = 24/272 (8%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
+IV+ G++VGLRRYRFFV+KD+ +VKCYFV +S++P+ +E
Sbjct: 313 EIVQNGILVGLRRYRFFVYKDD---GKKRRLKDKEEKIDSVKCYFVRMESLNPYENE-TY 368
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
+L K V EAR FMH+H ++S+ KYMARFSLILS T K+ +D ++ +++IEDI DK
Sbjct: 369 ILHDKMVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVNIDRIEDIYCHDK 428
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHN-------------ADTSYEL 521
G II+DEDGKP++HTDGTGYISEDLA KC ++ KH + S EL
Sbjct: 429 SGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHKCANLVRYANGVKLGENSSEL 488
Query: 522 -----------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQET 668
LL+QCRLF++G AVKGTLLVNRKL IQ+R SMIKVE D +L
Sbjct: 489 GEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPQRTIQIRPSMIKVEADPRLSRAHM 548
Query: 669 FNSLEIVNTRNKANSLGLREYVEMTLIEELIY 764
FNSLEI N + Y+ TLI L Y
Sbjct: 549 FNSLEI----NTPSLKPRNTYLSRTLIALLTY 576
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 216 bits (551), Expect = 5e-54
Identities = 127/272 (46%), Positives = 165/272 (60%), Gaps = 24/272 (8%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
+IV+ G++VGLRRYRFFV+KD+ +VKCYFV +S++P+ +E
Sbjct: 369 EIVQNGILVGLRRYRFFVYKDD---GKKRSSKDKEEKIDSVKCYFVRMESLNPYE-KETY 424
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
+L K V EAR FMH+H ++S+ KYMARFSL LS T K+ +D ++ +++IEDI DK
Sbjct: 425 ILRDKMVHEARCNFMHVHMVSSMAKYMARFSLTLSTTVKLQVDLNSVNIDRIEDICCHDK 484
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHN-------------ADTSYEL 521
G II+DEDGKP++HTDGTGYISEDLA KC ++ KH + S EL
Sbjct: 485 SGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHRCANLERYTNGVKLGENSSEL 544
Query: 522 -----------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQET 668
LL+QCRLF++G AVKGTLLVNRKL IQ+R SMIKVE D +L +
Sbjct: 545 GEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRRTIQIRPSMIKVEADPRLSRAQM 604
Query: 669 FNSLEIVNTRNKANSLGLREYVEMTLIEELIY 764
FNSLEI N + Y+ TLI L Y
Sbjct: 605 FNSLEI----NTPSLKPRNTYLSRTLIALLTY 632
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 215 bits (548), Expect = 1e-53
Identities = 124/254 (48%), Positives = 164/254 (64%), Gaps = 6/254 (2%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
KI +G+ VGLR+YRFFVFKD S+VKCYFV +S +
Sbjct: 245 KIAREGIFVGLRQYRFFVFKD------GGKEEKKKNPTSSVKCYFVFMES---------S 289
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
L K+V EAR +FMH H ++S+ KYMARFSLILSKT K+D+D + + +++I+D P +D+
Sbjct: 290 ALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDE 349
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKH----NADT--SYELLLIQCRL 542
DG +++DED KP++ TDGTG+ISEDLA++C L K+ N+D S LLIQCRL
Sbjct: 350 DGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSDVCDSRYPLLIQCRL 409
Query: 543 FHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRNKANSLGL 722
F++G AVKGTLL+NRKL P IQ+R SMIKVE D KL + +T NS+EI T N+
Sbjct: 410 FNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPR---- 465
Query: 723 REYVEMTLIEELIY 764
R Y+ LI L Y
Sbjct: 466 RSYLSKYLIALLSY 479
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 206 bits (525), Expect = 6e-51
Identities = 117/272 (43%), Positives = 168/272 (61%), Gaps = 22/272 (8%)
Frame = +3
Query: 15 AGKIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEE 194
A IVE+G++VGLRRYRFFV+KD++ +++KCYFV F+SI +
Sbjct: 284 ANMIVEEGILVGLRRYRFFVYKDDKEKKKSPAMMKKKT--ASLKCYFVRFESIETCNDGG 341
Query: 195 NNVLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQ 374
+ V K +S+AR FMH+H ++++ KY AR SLILSKT K+ ++ A++ +E+IEDI +
Sbjct: 342 SYVFSTKRISQARCQFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERIEDILCR 401
Query: 375 DKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYE------------ 518
D++G II DEDG+P +HTDGTG+ISEDLA+ C K+ +++ D +YE
Sbjct: 402 DENGCIIKDEDGEPRIHTDGTGFISEDLAMHCPKDFVKAEYIKDENYENFVDIVDLDAER 461
Query: 519 ----------LLLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQET 668
LL+QCRLF +G AVKGT LVNRK+ +I +R SM+KVE D + + T
Sbjct: 462 RESVSWNREPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPAISSIPT 521
Query: 669 FNSLEIVNTRNKANSLGLREYVEMTLIEELIY 764
F+SLEIV ++ N + Y+ LI L Y
Sbjct: 522 FDSLEIVAISHRPN----KAYLSKNLISLLSY 549
>gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]
Length = 929
Score = 206 bits (523), Expect = 9e-51
Identities = 110/239 (46%), Positives = 148/239 (61%)
Frame = +3
Query: 24 IVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENNV 203
I + G+++GLRRY+FFVFKD + VKCYF+ DS + + + +
Sbjct: 240 IAKNGIMIGLRRYQFFVFKD-----GGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYI 294
Query: 204 LLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDKD 383
L KS+ EAR FMH+H ++ YMARFSLILSKT +++D I ++I+DI D+D
Sbjct: 295 LTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDQIDDIHCHDQD 354
Query: 384 GSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLIQCRLFHDGYAV 563
G + D++ KP +H+DGTGYISEDLA C + K S + LLIQ R+F+DGYAV
Sbjct: 355 GKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQPLLIQFRMFYDGYAV 414
Query: 564 KGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRNKANSLGLREYVEM 740
KGT L+N+KL P +QVR SMIKV KD L N TFN+LE+V TR++ Y EM
Sbjct: 415 KGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTRSQIFGAAALNYGEM 473
>ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus vulgaris]
gi|561026288|gb|ESW24973.1| hypothetical protein
PHAVU_004G1764001g, partial [Phaseolus vulgaris]
Length = 689
Score = 204 bits (519), Expect = 3e-50
Identities = 132/282 (46%), Positives = 164/282 (58%), Gaps = 28/282 (9%)
Frame = +3
Query: 3 EAYPA-GKIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISP 179
EAY GK ++G+ VGLR YRFFVFKD T S+VKCYFV S
Sbjct: 238 EAYRLYGKFGKEGINVGLRLYRFFVFKD-----GGKEEKKKDPTSSSVKCYFVRMQSCWS 292
Query: 180 HSHEENNVLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIE 359
N +L +K+VSEAR LFMH H L S++KYMARFSLILSKT K+++D A + V+ I+
Sbjct: 293 IDGSANYILSNKTVSEARGLFMHAHLLPSLDKYMARFSLILSKTFKLNIDLATVNVQTIQ 352
Query: 360 DIPFQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKC----------------------- 470
D+ QD++G+II+D + KP + TDGTG+IS DLA+ C
Sbjct: 353 DVYCQDENGNIIYDNE-KPRILTDGTGFISGDLALLCPNSVCKGNNLENNYIQEINNLLE 411
Query: 471 ----LKELHASKHNADTSYELLLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVE 638
KE+ ++ T LLIQCRLFH G A+KGTLLVN+KL P I VR SMIKVE
Sbjct: 412 LEDMCKEMGETELKLTTHQPPLLIQCRLFHMGSAIKGTLLVNKKLPPRTIHVRPSMIKVE 471
Query: 639 KDQKLQNQETFNSLEIVNTRNKANSLGLREYVEMTLIEELIY 764
D L N ++ NSLEIVNT K N R Y+ LI L Y
Sbjct: 472 TDLSL-NMQSINSLEIVNTSIKPN----RTYLSKNLIALLSY 508
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 200 bits (509), Expect = 4e-49
Identities = 117/273 (42%), Positives = 165/273 (60%), Gaps = 25/273 (9%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
+I +G++VGLR Y FFVFKD + S VKCYFV +S +
Sbjct: 284 EIAREGILVGLRCYHFFVFKD-----GGKEEKKKDPSTSPVKCYFVRMESSAFIDMGYQY 338
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
+L K+V EAR +FMH+ T++S+ YM+R SLILSKT K+++DF+ I +E+IED P +DK
Sbjct: 339 ILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIEDEPCRDK 398
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL------------- 521
DG++++ +DG+ ++HTDGTG+ISEDLA+KC ++ K D S E
Sbjct: 399 DGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSIDRKELEANFSD 457
Query: 522 ------------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQE 665
LL+Q RLF++G AVKGTLL+N+KL P IQ+R SMIKV+ D+ L + +
Sbjct: 458 VARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQ 517
Query: 666 TFNSLEIVNTRNKANSLGLREYVEMTLIEELIY 764
TFNSLE+V T N+ + Y+ LI L Y
Sbjct: 518 TFNSLEVVKTSNQPR----KTYLSRNLIALLSY 546
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 200 bits (509), Expect = 4e-49
Identities = 117/273 (42%), Positives = 165/273 (60%), Gaps = 25/273 (9%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
+I +G++VGLR Y FFVFKD + S VKCYFV +S +
Sbjct: 286 EIAREGILVGLRCYHFFVFKD-----GGKEEKKKDPSTSPVKCYFVRMESSAFIDMGYQY 340
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
+L K+V EAR +FMH+ T++S+ YM+R SLILSKT K+++DF+ I +E+IED P +DK
Sbjct: 341 ILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIEDEPCRDK 400
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL------------- 521
DG++++ +DG+ ++HTDGTG+ISEDLA+KC ++ K D S E
Sbjct: 401 DGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSIDRKELEANFSD 459
Query: 522 ------------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQE 665
LL+Q RLF++G AVKGTLL+N+KL P IQ+R SMIKV+ D+ L + +
Sbjct: 460 VARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQ 519
Query: 666 TFNSLEIVNTRNKANSLGLREYVEMTLIEELIY 764
TFNSLE+V T N+ + Y+ LI L Y
Sbjct: 520 TFNSLEVVKTSNQPR----KTYLSRNLIALLSY 548
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 197 bits (500), Expect = 4e-48
Identities = 125/281 (44%), Positives = 163/281 (58%), Gaps = 29/281 (10%)
Frame = +3
Query: 9 YPAGKIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSH 188
Y KI G+++GLRRY FFVFKD T SAVKCYFV +S +
Sbjct: 323 YAYSKIARDGILLGLRRYHFFVFKD-----GGKEEKKKNPTTSAVKCYFVRMESDAYIDK 377
Query: 189 EENNVLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIP 368
E L +++V EAR LFMH H ++SI YMARFSLILSKT + +D + + V++I DIP
Sbjct: 378 IEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIP 437
Query: 369 FQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHA--SKHNADTS---------- 512
+D G++I+ DGKP++HTDGTG+ISEDLA++C + +KH+AD
Sbjct: 438 CKDIYGNVIY-RDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKAIWQRIPAFE 496
Query: 513 -------------YEL----LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEK 641
EL LLIQ RLF++G AVKGT L+N++L P IQ+R SMIKVE
Sbjct: 497 GFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEI 556
Query: 642 DQKLQNQETFNSLEIVNTRNKANSLGLREYVEMTLIEELIY 764
D L+N ET NSLE+V T N R ++ LI L Y
Sbjct: 557 DPDLENFETENSLELVGTSNPPK----RTFLSRNLIALLNY 593
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 196 bits (498), Expect = 8e-48
Identities = 109/234 (46%), Positives = 150/234 (64%), Gaps = 7/234 (2%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
+I + G++VGLRRY+FFVFKD + + VKCYF+ DS + + +
Sbjct: 281 RIAKNGIMVGLRRYQFFVFKD-----VGKAEKKKDFSTNGVKCYFIRTDSTAANDMGKAY 335
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
+ K+++EAR FMH+HTL S+ KYMARFSLILSKT K+++D I ++I++I D+
Sbjct: 336 IFSGKTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQEIKEIHCHDQ 395
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKC----LKELHASKHNADTSY---ELLLIQCR 539
+ +++ D++ +P +H+DGTGYISEDLA C K SK N S LLIQ R
Sbjct: 396 NNNVVLDKNKEPRMHSDGTGYISEDLARMCPVNIFKGKCLSKKNIQESCGQDPPLLIQFR 455
Query: 540 LFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRN 701
+F+DG AVKGT L+N+KL +QVR SMIKV KD+ L N TFNSLE+V T N
Sbjct: 456 MFYDGNAVKGTFLLNKKLPDRTVQVRPSMIKVSKDRALSNFSTFNSLEVVTTSN 509
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 196 bits (497), Expect = 1e-47
Identities = 107/233 (45%), Positives = 143/233 (61%), Gaps = 7/233 (3%)
Frame = +3
Query: 24 IVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENNV 203
I + G+++GLRRY+FFVFKD + VKCYF+ DS + + + +
Sbjct: 270 IAKNGIMIGLRRYQFFVFKD-----GGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYI 324
Query: 204 LLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDKD 383
L KS+ EAR FMH+H ++ YMARFSLILSKT +++D I ++I+DI D+D
Sbjct: 325 LTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDQIDDIHCHDQD 384
Query: 384 GSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYE-------LLLIQCRL 542
G + D++ KP +H+DGTGYISEDLA C + K S + LLIQ R+
Sbjct: 385 GKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRM 444
Query: 543 FHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRN 701
F+DGYAVKGT L+N+KL P +QVR SMIKV KD L N TFN+LE+V T N
Sbjct: 445 FYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSN 497
>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
gi|482565607|gb|EOA29796.1| hypothetical protein
CARUB_v10012890mg [Capsella rubella]
Length = 998
Score = 195 bits (495), Expect = 2e-47
Identities = 111/233 (47%), Positives = 141/233 (60%), Gaps = 7/233 (3%)
Frame = +3
Query: 24 IVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENNV 203
I + G++VGLRRY+FFVFKD + VKCYF+ S + E +
Sbjct: 287 IAKNGIMVGLRRYQFFVFKD-----GGKEGKKKDFSRQGVKCYFIRTGSTALSDMENPYI 341
Query: 204 LLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDKD 383
L S+ EAR FMH++ L S YMARFSLILSKT K+++D I EKI+DI D+D
Sbjct: 342 LDGMSIHEARMHFMHVYNLPSPANYMARFSLILSKTKKLEMDMTGITFEKIDDIHCHDQD 401
Query: 384 GSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYE-------LLLIQCRL 542
+ D++GKP +H+DGTGYISEDLA C + K + + LLIQ R+
Sbjct: 402 NHDVLDKNGKPCIHSDGTGYISEDLARMCPINIFKGKSIRSNNIKGTCGEDPPLLIQFRM 461
Query: 543 FHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRN 701
F+ GYAVKGT L N+KL P +QVR SMIKV +DQ L N TFNSLE+VNT N
Sbjct: 462 FYKGYAVKGTFLSNKKLPPQTVQVRPSMIKVYEDQALLNFSTFNSLEVVNTSN 514
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 195 bits (495), Expect = 2e-47
Identities = 108/242 (44%), Positives = 144/242 (59%), Gaps = 16/242 (6%)
Frame = +3
Query: 24 IVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENNV 203
I + G++VGLRRYRFFVFKD + VKCYF+ DS + + +
Sbjct: 274 IAKNGIMVGLRRYRFFVFKD-----GGKEEKKKDVSTKGVKCYFIRTDSTASIDMQNPYI 328
Query: 204 LLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDKD 383
KS+ EAR FMH++TL+S+ YM+RFSLILSKT +++D I E+I+DI D+D
Sbjct: 329 FAGKSMHEARMHFMHVNTLSSLPNYMSRFSLILSKTKTLEVDMTGITFEQIDDIHCHDQD 388
Query: 384 GSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL-------------- 521
+ D++GKP +H+DGTGYISEDLA C + K + +
Sbjct: 389 DKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCGQE 448
Query: 522 --LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNT 695
LLIQ R+F++GYAVKGT L N+KL P +QVR SMIKV +D+ L N TFNSLE+V T
Sbjct: 449 PPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTT 508
Query: 696 RN 701
N
Sbjct: 509 SN 510
>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
gi|557110063|gb|ESQ50360.1| hypothetical protein
EUTSA_v10001896mg [Eutrema salsugineum]
Length = 988
Score = 194 bits (494), Expect = 2e-47
Identities = 110/245 (44%), Positives = 145/245 (59%), Gaps = 16/245 (6%)
Frame = +3
Query: 24 IVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENNV 203
I + G++VGLRRY+FFVFKD + VKCYF+ DS + +
Sbjct: 255 IAKNGIMVGLRRYQFFVFKD-----GGKEEKKKDFSTKGVKCYFIRTDSTASIDLQNPYF 309
Query: 204 LLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDKD 383
KS+ EAR FMH++TL S+ YMARFSLILSKT K+++D I ++I+DI D++
Sbjct: 310 FSGKSIHEARMHFMHVNTLPSLANYMARFSLILSKTKKLEVDMTGITFQQIDDIHCHDQE 369
Query: 384 GSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL-------------- 521
+ + D+ GKP +H+DGTGYISEDLA C ++ K + +
Sbjct: 370 NNNVLDKHGKPCIHSDGTGYISEDLARMCPTDIFKGKCIGIDNIQSKIPNVEAQGTCGKE 429
Query: 522 --LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNT 695
LLIQ R+F+DGYAVKGT L+N+KL +QVR SMIKV DQ L N TFNSLE+VNT
Sbjct: 430 PPLLIQFRMFYDGYAVKGTFLLNKKLPDRTVQVRPSMIKVYNDQTLSNFSTFNSLEVVNT 489
Query: 696 RNKAN 710
N N
Sbjct: 490 SNPPN 494
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 194 bits (494), Expect = 2e-47
Identities = 107/234 (45%), Positives = 140/234 (59%), Gaps = 7/234 (2%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
+I + G+++GLRRY+FFVFKD + VKCYF+ DS + E
Sbjct: 273 EIAKNGIMIGLRRYQFFVFKD-----GGKEEKKKDLSTKKVKCYFIRTDSTASCDMENPY 327
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
+ KS+ EAR FMH+H ++ YMARFSLILSKT +++D I + I+DI D+
Sbjct: 328 IFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDPIDDIHCHDQ 387
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASK-------HNADTSYELLLIQCR 539
DG + D++ KP +H+DGTGYISEDLA C + K A LLIQ R
Sbjct: 388 DGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSENIQEACNQDPPLLIQFR 447
Query: 540 LFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTRN 701
+F+DGYAVKGT L+N+KL P +QVR SMIKV KD L N TFN+LE+V T N
Sbjct: 448 MFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSN 501
>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
gi|462399806|gb|EMJ05474.1| hypothetical protein
PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 193 bits (491), Expect = 5e-47
Identities = 104/223 (46%), Positives = 144/223 (64%)
Frame = +3
Query: 21 KIVEKGLVVGLRRYRFFVFKDEQXXXXXXXXXXXXXTYSAVKCYFVHFDSISPHSHEENN 200
K+ +G++VGLRRY+FFVFKD T S VKCYF+ S + E+
Sbjct: 95 KVAREGILVGLRRYQFFVFKD-----GGNKEKKKNPTSSPVKCYFICVGSNAAIDRSEDY 149
Query: 201 VLLHKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEKIEDIPFQDK 380
++ + E R +FMH HT++S+ YMARFSLILSKT +++D++ + VE I+D D+
Sbjct: 150 KFSNRKIHETRCIFMHAHTVSSVSNYMARFSLILSKTESLEVDWSLVKVEDIDDEYCLDE 209
Query: 381 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLIQCRLFHDGYA 560
G+ I D DGKP++HTDGTG+ISEDLA+ C K+L + + E LL+Q RLF+ G A
Sbjct: 210 SGNRI-DRDGKPLIHTDGTGFISEDLALLCPKDLLKRDYISKEYIEPLLLQFRLFYKGRA 268
Query: 561 VKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIV 689
VKGT L+N+ L P IQ+R SM+KVE D + + +T NSLEIV
Sbjct: 269 VKGTFLINKTLPPKTIQIRPSMVKVETDPMISDDQTVNSLEIV 311