BLASTX nr result

ID: Mentha24_contig00037904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00037904
         (589 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]    47   1e-08
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    47   1e-08
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...    44   6e-08
dbj|BAB08717.1| unnamed protein product [Arabidopsis thaliana]         44   1e-07
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...    47   1e-07
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    42   4e-07
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    40   4e-07
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259...    43   5e-07
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243...    43   1e-06
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248...    41   1e-06
ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244...    44   7e-06
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260...    40   7e-06
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]                40   9e-06

>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score = 47.4 bits (111), Expect(2) = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 14/66 (21%)
 Frame = +1

Query: 106 LRESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNR 243
           L+ESG+L  F  P     NG               LL  +GLPLKFW ++  T T+L+NR
Sbjct: 622 LQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINR 681

Query: 244 IPSRVL 261
           +PS+VL
Sbjct: 682 MPSKVL 687



 Score = 38.1 bits (87), Expect(2) = 1e-08
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 272 SPYEVMFKKEPDYKMVKPFGCLVY 343
           SPY  +FK+ PDYK ++ FGCL Y
Sbjct: 691 SPYFALFKRNPDYKFLRVFGCLCY 714


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 47.4 bits (111), Expect(2) = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 14/66 (21%)
 Frame = +1

Query: 106 LRESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNR 243
           L+ESG+L  F  P     NG               LL  +GLPLKFW ++  T T+L+NR
Sbjct: 572 LQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINR 631

Query: 244 IPSRVL 261
           +PS+VL
Sbjct: 632 MPSKVL 637



 Score = 38.1 bits (87), Expect(2) = 1e-08
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 272 SPYEVMFKKEPDYKMVKPFGCLVY 343
           SPY  +FK+ PDYK ++ FGCL Y
Sbjct: 641 SPYFALFKRNPDYKFLRVFGCLCY 664


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
           gi|7268152|emb|CAB78488.1| retrovirus-related like
           polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score = 43.5 bits (101), Expect(2) = 6e-08
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +2

Query: 272 SPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQRT 370
           SPYE++  K+PDY ++K FGCL +     H+RT
Sbjct: 782 SPYELILNKQPDYSLLKNFGCLCFVSTNAHERT 814



 Score = 39.3 bits (90), Expect(2) = 6e-08
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
 Frame = +1

Query: 106 LRESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNR 243
           ++E G+L  F     PQ N                LL+QS +P+++W   + T  +L+NR
Sbjct: 713 VKEHGMLHHFSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINR 772

Query: 244 IPSRVLN 264
           +PS +LN
Sbjct: 773 LPSPLLN 779


>dbj|BAB08717.1| unnamed protein product [Arabidopsis thaliana]
          Length = 813

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = +2

Query: 269 LSPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQR 367
           +SPYE++ K++PDY ++K FGCL Y     H+R
Sbjct: 323 ISPYELLLKRKPDYSLLKNFGCLCYVSTNLHER 355



 Score = 37.4 bits (85), Expect(2) = 1e-07
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = +1

Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVLN 264
           LL+QS +P+++W   ++T T+L+NR+ S +LN
Sbjct: 290 LLFQSKVPMQYWSDCVITATFLINRLSSPLLN 321


>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score = 46.6 bits (109), Expect(2) = 1e-07
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = +1

Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVLN 264
           LLYQS LP KFW   +LT T+L+NR PS+VLN
Sbjct: 189 LLYQSHLPKKFWGDCLLTATYLINRFPSKVLN 220



 Score = 35.0 bits (79), Expect(2) = 1e-07
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQR 367
           G  PY+V+F   PDY  +K FG L +   LT  R
Sbjct: 221 GKCPYQVLFGSLPDYSHLKSFGSLCFVSTLTRHR 254


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 42.0 bits (97), Expect(2) = 4e-07
 Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 14/62 (22%)
 Frame = +1

Query: 118 GLLIPFPFPDYPQPNGPL--------------LYQSGLPLKFWPFSILTVTWLLNRIPSR 255
           G+L      D PQ NG +              L+Q  LP+KFW  SILT T L+NR PS 
Sbjct: 642 GILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSA 701

Query: 256 VL 261
           VL
Sbjct: 702 VL 703



 Score = 38.1 bits (87), Expect(2) = 4e-07
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +2

Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYA 346
           G +PYE++F + P Y M++ FGCL YA
Sbjct: 705 GKTPYELLFGERPSYDMLRSFGCLCYA 731


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 40.4 bits (93), Expect(2) = 4e-07
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = +1

Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVLN 264
           L++QS LPL +W   +LT T L+NR PS +LN
Sbjct: 678 LMFQSKLPLSYWTDCVLTXTHLINRTPSSILN 709



 Score = 39.7 bits (91), Expect(2) = 4e-07
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +2

Query: 272 SPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQR 367
           +PY+++F+K P+Y   K FGCL +A  +T+ R
Sbjct: 712 TPYQLLFQKPPNYNYFKXFGCLCFASTITNNR 743


>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
           lycopersicum]
          Length = 986

 Score = 42.7 bits (99), Expect(2) = 5e-07
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 14/65 (21%)
 Frame = +1

Query: 109 RESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNRI 246
           +E G++     P  PQ NG               LL+QS LP+++W   +LT T+L+NR+
Sbjct: 740 QEKGIIHQKSCPYTPQQNGVVERKHKYLLETARALLFQSKLPMRYWGECVLTATYLINRL 799

Query: 247 PSRVL 261
           P+++L
Sbjct: 800 PTKLL 804



 Score = 37.0 bits (84), Expect(2) = 5e-07
 Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +2

Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYAMNL-THQ 364
           G SPYE++++K+P Y  +K FGCL +   L TH+
Sbjct: 806 GKSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHK 839


>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
           lycopersicum]
          Length = 957

 Score = 42.7 bits (99), Expect(2) = 1e-06
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 14/68 (20%)
 Frame = +1

Query: 100 HSLRESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLL 237
           H  +  G++     P  PQ NG               LL+QS LPL++W   +LT T+++
Sbjct: 736 HFFQTKGIIHQKTCPYTPQQNGVVERKHKYLLETARSLLFQSKLPLRYWGECVLTATYII 795

Query: 238 NRIPSRVL 261
           NR+P+++L
Sbjct: 796 NRLPTKLL 803



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +2

Query: 272 SPYEVMFKKEPDYKMVKPFGCLVYAMNL-THQ 364
           SPYE+++ K+P Y  +K FGCL +   L TH+
Sbjct: 807 SPYEILYLKQPTYSHLKSFGCLCFPTVLKTHK 838


>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
           lycopersicum]
          Length = 729

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 14/65 (21%)
 Frame = +1

Query: 109 RESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNRI 246
           +E G++     P  PQ NG               LL+QS +P+++W   +LT T+L+NR+
Sbjct: 397 QEKGIIHQKSCPYTPQQNGVVEMKHKYLLETARALLFQSKIPVRYWGEYVLTATYLINRL 456

Query: 247 PSRVL 261
           P+++L
Sbjct: 457 PTKLL 461



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +2

Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYAMNL-THQ 364
           G SPYE++++K+P Y  +K FGCL +   L TH+
Sbjct: 463 GKSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHK 496


>ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244259 [Solanum
           lycopersicum]
          Length = 1812

 Score = 44.3 bits (103), Expect(2) = 7e-06
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = +1

Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVL 261
           L +QSG+PLKFW   ILT  +++NR+PS+VL
Sbjct: 678 LRFQSGVPLKFWGHCILTAVYIINRLPSKVL 708



 Score = 31.6 bits (70), Expect(2) = 7e-06
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYA 346
           G SPYEV F  +P     + FGCL YA
Sbjct: 710 GKSPYEVFFNIKPSLIHSRTFGCLCYA 736


>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
           lycopersicum]
          Length = 924

 Score = 40.0 bits (92), Expect(2) = 7e-06
 Identities = 14/31 (45%), Positives = 26/31 (83%)
 Frame = +1

Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVL 261
           LL+QS +P+++W   +LT T+L+NR+P+++L
Sbjct: 609 LLFQSKMPMRYWVECVLTATYLINRLPTKLL 639



 Score = 35.8 bits (81), Expect(2) = 7e-06
 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +2

Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYAMNL-THQ 364
           G SPYE++++K+P Y  ++ FGCL +   L TH+
Sbjct: 641 GKSPYELLYQKKPFYSHLRNFGCLCFPTTLKTHK 674


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score = 39.7 bits (91), Expect(2) = 9e-06
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 14/65 (21%)
 Frame = +1

Query: 112 ESGLLIPFPFPDYPQPN--------------GPLLYQSGLPLKFWPFSILTVTWLLNRIP 249
           + G+    P P+ P+ N                L++QSG+PL++W   +LT  +L+NR+ 
Sbjct: 697 KEGIKADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLL 756

Query: 250 SRVLN 264
           S V+N
Sbjct: 757 SPVIN 761



 Score = 35.8 bits (81), Expect(2) = 9e-06
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 272 SPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQRT 370
           +PYE + K +PDY  +K FGCL Y       RT
Sbjct: 764 TPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRT 796


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