BLASTX nr result
ID: Mentha24_contig00037904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00037904
(589 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 47 1e-08
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 47 1e-08
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 44 6e-08
dbj|BAB08717.1| unnamed protein product [Arabidopsis thaliana] 44 1e-07
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ... 47 1e-07
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 42 4e-07
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 40 4e-07
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 43 5e-07
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243... 43 1e-06
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 41 1e-06
ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244... 44 7e-06
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260... 40 7e-06
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 40 9e-06
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 14/66 (21%)
Frame = +1
Query: 106 LRESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNR 243
L+ESG+L F P NG LL +GLPLKFW ++ T T+L+NR
Sbjct: 622 LQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINR 681
Query: 244 IPSRVL 261
+PS+VL
Sbjct: 682 MPSKVL 687
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 272 SPYEVMFKKEPDYKMVKPFGCLVY 343
SPY +FK+ PDYK ++ FGCL Y
Sbjct: 691 SPYFALFKRNPDYKFLRVFGCLCY 714
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 14/66 (21%)
Frame = +1
Query: 106 LRESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNR 243
L+ESG+L F P NG LL +GLPLKFW ++ T T+L+NR
Sbjct: 572 LQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINR 631
Query: 244 IPSRVL 261
+PS+VL
Sbjct: 632 MPSKVL 637
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 272 SPYEVMFKKEPDYKMVKPFGCLVY 343
SPY +FK+ PDYK ++ FGCL Y
Sbjct: 641 SPYFALFKRNPDYKFLRVFGCLCY 664
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 43.5 bits (101), Expect(2) = 6e-08
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 272 SPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQRT 370
SPYE++ K+PDY ++K FGCL + H+RT
Sbjct: 782 SPYELILNKQPDYSLLKNFGCLCFVSTNAHERT 814
Score = 39.3 bits (90), Expect(2) = 6e-08
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Frame = +1
Query: 106 LRESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNR 243
++E G+L F PQ N LL+QS +P+++W + T +L+NR
Sbjct: 713 VKEHGMLHHFSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINR 772
Query: 244 IPSRVLN 264
+PS +LN
Sbjct: 773 LPSPLLN 779
>dbj|BAB08717.1| unnamed protein product [Arabidopsis thaliana]
Length = 813
Score = 44.3 bits (103), Expect(2) = 1e-07
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 269 LSPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQR 367
+SPYE++ K++PDY ++K FGCL Y H+R
Sbjct: 323 ISPYELLLKRKPDYSLLKNFGCLCYVSTNLHER 355
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1
Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVLN 264
LL+QS +P+++W ++T T+L+NR+ S +LN
Sbjct: 290 LLFQSKVPMQYWSDCVITATFLINRLSSPLLN 321
>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
Length = 492
Score = 46.6 bits (109), Expect(2) = 1e-07
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1
Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVLN 264
LLYQS LP KFW +LT T+L+NR PS+VLN
Sbjct: 189 LLYQSHLPKKFWGDCLLTATYLINRFPSKVLN 220
Score = 35.0 bits (79), Expect(2) = 1e-07
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQR 367
G PY+V+F PDY +K FG L + LT R
Sbjct: 221 GKCPYQVLFGSLPDYSHLKSFGSLCFVSTLTRHR 254
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 42.0 bits (97), Expect(2) = 4e-07
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 14/62 (22%)
Frame = +1
Query: 118 GLLIPFPFPDYPQPNGPL--------------LYQSGLPLKFWPFSILTVTWLLNRIPSR 255
G+L D PQ NG + L+Q LP+KFW SILT T L+NR PS
Sbjct: 642 GILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSA 701
Query: 256 VL 261
VL
Sbjct: 702 VL 703
Score = 38.1 bits (87), Expect(2) = 4e-07
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYA 346
G +PYE++F + P Y M++ FGCL YA
Sbjct: 705 GKTPYELLFGERPSYDMLRSFGCLCYA 731
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 40.4 bits (93), Expect(2) = 4e-07
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVLN 264
L++QS LPL +W +LT T L+NR PS +LN
Sbjct: 678 LMFQSKLPLSYWTDCVLTXTHLINRTPSSILN 709
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 272 SPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQR 367
+PY+++F+K P+Y K FGCL +A +T+ R
Sbjct: 712 TPYQLLFQKPPNYNYFKXFGCLCFASTITNNR 743
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 42.7 bits (99), Expect(2) = 5e-07
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 14/65 (21%)
Frame = +1
Query: 109 RESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNRI 246
+E G++ P PQ NG LL+QS LP+++W +LT T+L+NR+
Sbjct: 740 QEKGIIHQKSCPYTPQQNGVVERKHKYLLETARALLFQSKLPMRYWGECVLTATYLINRL 799
Query: 247 PSRVL 261
P+++L
Sbjct: 800 PTKLL 804
Score = 37.0 bits (84), Expect(2) = 5e-07
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYAMNL-THQ 364
G SPYE++++K+P Y +K FGCL + L TH+
Sbjct: 806 GKSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHK 839
>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
lycopersicum]
Length = 957
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 14/68 (20%)
Frame = +1
Query: 100 HSLRESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLL 237
H + G++ P PQ NG LL+QS LPL++W +LT T+++
Sbjct: 736 HFFQTKGIIHQKTCPYTPQQNGVVERKHKYLLETARSLLFQSKLPLRYWGECVLTATYII 795
Query: 238 NRIPSRVL 261
NR+P+++L
Sbjct: 796 NRLPTKLL 803
Score = 35.4 bits (80), Expect(2) = 1e-06
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 272 SPYEVMFKKEPDYKMVKPFGCLVYAMNL-THQ 364
SPYE+++ K+P Y +K FGCL + L TH+
Sbjct: 807 SPYEILYLKQPTYSHLKSFGCLCFPTVLKTHK 838
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 41.2 bits (95), Expect(2) = 1e-06
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 14/65 (21%)
Frame = +1
Query: 109 RESGLLIPFPFPDYPQPNG--------------PLLYQSGLPLKFWPFSILTVTWLLNRI 246
+E G++ P PQ NG LL+QS +P+++W +LT T+L+NR+
Sbjct: 397 QEKGIIHQKSCPYTPQQNGVVEMKHKYLLETARALLFQSKIPVRYWGEYVLTATYLINRL 456
Query: 247 PSRVL 261
P+++L
Sbjct: 457 PTKLL 461
Score = 37.0 bits (84), Expect(2) = 1e-06
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYAMNL-THQ 364
G SPYE++++K+P Y +K FGCL + L TH+
Sbjct: 463 GKSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHK 496
>ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244259 [Solanum
lycopersicum]
Length = 1812
Score = 44.3 bits (103), Expect(2) = 7e-06
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVL 261
L +QSG+PLKFW ILT +++NR+PS+VL
Sbjct: 678 LRFQSGVPLKFWGHCILTAVYIINRLPSKVL 708
Score = 31.6 bits (70), Expect(2) = 7e-06
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYA 346
G SPYEV F +P + FGCL YA
Sbjct: 710 GKSPYEVFFNIKPSLIHSRTFGCLCYA 736
>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
lycopersicum]
Length = 924
Score = 40.0 bits (92), Expect(2) = 7e-06
Identities = 14/31 (45%), Positives = 26/31 (83%)
Frame = +1
Query: 169 LLYQSGLPLKFWPFSILTVTWLLNRIPSRVL 261
LL+QS +P+++W +LT T+L+NR+P+++L
Sbjct: 609 LLFQSKMPMRYWVECVLTATYLINRLPTKLL 639
Score = 35.8 bits (81), Expect(2) = 7e-06
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 266 GLSPYEVMFKKEPDYKMVKPFGCLVYAMNL-THQ 364
G SPYE++++K+P Y ++ FGCL + L TH+
Sbjct: 641 GKSPYELLYQKKPFYSHLRNFGCLCFPTTLKTHK 674
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 39.7 bits (91), Expect(2) = 9e-06
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 14/65 (21%)
Frame = +1
Query: 112 ESGLLIPFPFPDYPQPN--------------GPLLYQSGLPLKFWPFSILTVTWLLNRIP 249
+ G+ P P+ P+ N L++QSG+PL++W +LT +L+NR+
Sbjct: 697 KEGIKADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLL 756
Query: 250 SRVLN 264
S V+N
Sbjct: 757 SPVIN 761
Score = 35.8 bits (81), Expect(2) = 9e-06
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 272 SPYEVMFKKEPDYKMVKPFGCLVYAMNLTHQRT 370
+PYE + K +PDY +K FGCL Y RT
Sbjct: 764 TPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRT 796