BLASTX nr result

ID: Mentha24_contig00037540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00037540
         (408 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]         64   2e-08
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...    63   5e-08
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...    63   5e-08
ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610...    61   2e-07
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...    59   5e-07
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    58   2e-06
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...    58   2e-06
gb|ABA97403.1| retrotransposon protein, putative, unclassified [...    56   5e-06
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]         56   6e-06
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]         56   6e-06
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]          55   8e-06
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]      55   8e-06

>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = -1

Query: 204  PKSVAD--LPPTDDEGLFLVSPVEILDTRVVERNGLPTIQICVQWLNSTPTAATWEDFKY 31
            PK V +  LP TDD G  L  P  +L+ R++ +N  P +Q  VQW N   +AATWED  +
Sbjct: 1242 PKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATWEDAAF 1301

Query: 30   IVRKFPSFDP 1
            I + FP+F+P
Sbjct: 1302 ISKVFPAFNP 1311



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = -1

Query: 312  CRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKS 196
            C++    +   PGLL PLPIP  AWTHIS+DF+EGLPKS
Sbjct: 939  CQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKS 977


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
           gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
           Japonica Group]
          Length = 866

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/62 (45%), Positives = 38/62 (61%)
 Frame = -1

Query: 186 LPPTDDEGLFLVSPVEILDTRVVERNGLPTIQICVQWLNSTPTAATWEDFKYIVRKFPSF 7
           LP  D EG  L +P+ +LD R++ RN  P +Q  + W N   +AATWED  +I + FPSF
Sbjct: 805 LPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFPSF 864

Query: 6   DP 1
            P
Sbjct: 865 TP 866


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/62 (45%), Positives = 38/62 (61%)
 Frame = -1

Query: 186 LPPTDDEGLFLVSPVEILDTRVVERNGLPTIQICVQWLNSTPTAATWEDFKYIVRKFPSF 7
           LP  D EG  L +P+ +LD R++ RN  P +Q  + W N   +AATWED  +I + FPSF
Sbjct: 584 LPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFPSF 643

Query: 6   DP 1
            P
Sbjct: 644 TP 645


>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
          Length = 1274

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 38/65 (58%)
 Frame = -1

Query: 195  VADLPPTDDEGLFLVSPVEILDTRVVERNGLPTIQICVQWLNSTPTAATWEDFKYIVRKF 16
            + +LP   ++G   + P  +LD RVV+R+  P +Q  VQW NS P  ATWED   I  KF
Sbjct: 1210 ITELPTIREDGHLQLVPDSVLDRRVVQRSNRPCVQWLVQWSNSFPEDATWEDAVKIQEKF 1269

Query: 15   PSFDP 1
            P F P
Sbjct: 1270 PLFKP 1274



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = -1

Query: 315  SCRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKS 196
            +C+R    N   PGLLQPLPIP   WT IS+DF+EGLPKS
Sbjct: 951  NCQRNKHENVLSPGLLQPLPIPEHNWTDISMDFIEGLPKS 990


>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
 Frame = -1

Query: 312 CRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKS--------VADLPPTDDEGLF 157
           C++    +   PGLLQP+PIP  AWTHIS+DF+EGLPKS        V D        + 
Sbjct: 349 CQKNNCEHVPYPGLLQPIPIPEMAWTHISMDFIEGLPKSEDKEVILVVVDRFTKYSHFIA 408

Query: 156 LVSP------VEILDTRVVERNGLPTIQICVQWLNSTPTAATWED 40
           L  P      V++    V + +GLP++ I  +  +   T+  W+D
Sbjct: 409 LSHPFTVQHVVKVFVDNVFKHHGLPSVIITNR--DMVFTSHLWQD 451


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = -1

Query: 189  DLPPTDDEGLFLVSPVEILDTRVVERNGLPTIQICVQWLNSTPTAATWEDFKYIVRKFPS 10
            +LP    +G     PV +L  R++ RN +   Q  + W N TP  ATWED  YI + FP+
Sbjct: 893  NLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPN 952

Query: 9    FDP 1
            F P
Sbjct: 953  FQP 955



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = -1

Query: 312 CRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKS 196
           C+ T   +  IPGLL PL +P  AWTHIS+DFVEGLPKS
Sbjct: 583 CQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKS 621


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = -1

Query: 312  CRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKS 196
            C+R+   +   PGLL+PLPIP  AWTHIS+DF+EGLP S
Sbjct: 964  CQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSS 1002


>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 562

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -1

Query: 312 CRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKS 196
           C++    +   PGLL PLP+P  AWTHIS+DF+EGLPKS
Sbjct: 352 CQKNKSEHNLQPGLLHPLPVPEMAWTHISMDFIEGLPKS 390


>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
          Length = 1373

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -1

Query: 315  SCRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKSVA-DLPPTDDEGLFLVSP 145
            +C+ T   +   PGLL PL IP  AWTHIS+DF+EGLPKS   D+ P   E L+ V P
Sbjct: 1125 TCQITKAEHVHSPGLLDPLQIPEMAWTHISMDFIEGLPKSQGKDVTPY--EALYGVHP 1180


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/65 (40%), Positives = 36/65 (55%)
 Frame = -1

Query: 195  VADLPPTDDEGLFLVSPVEILDTRVVERNGLPTIQICVQWLNSTPTAATWEDFKYIVRKF 16
            +A+LP    +G     PV +L  R++ R G+   Q  V W N +P+ ATWED   I   F
Sbjct: 1522 MANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMF 1581

Query: 15   PSFDP 1
            PSF+P
Sbjct: 1582 PSFNP 1586


>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
          Length = 394

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/39 (64%), Positives = 28/39 (71%)
 Frame = -1

Query: 312 CRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKS 196
           C+ T   N  IP LL PL IP  AWTHIS+DF+EGLPKS
Sbjct: 193 CQVTKSENIHIPSLLNPLEIPDMAWTHISMDFIEGLPKS 231


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = -1

Query: 315  SCRRTALLNTSIPGLLQPLPIPHTAWTHISLDFVEGLPKS 196
            +C+ T   +  IPGLL PL IP  AWTHI++DF+EGLPKS
Sbjct: 1102 TCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKS 1141


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