BLASTX nr result
ID: Mentha24_contig00037336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00037336
(781 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 209 7e-52
ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595... 206 8e-51
ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595... 206 8e-51
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s... 206 8e-51
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 206 8e-51
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 206 1e-50
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata] 204 3e-50
gb|EPS66723.1| hypothetical protein M569_08053 [Genlisea aurea] 186 8e-45
gb|ABU45174.1| unknown [Solanum melongena] 183 5e-44
gb|ABU45208.1| unknown [Solanum bulbocastanum] 182 9e-44
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252... 176 1e-41
ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III s... 174 2e-41
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 174 3e-41
gb|AAG01125.1|AF273333_10 BAC19.10 [Solanum lycopersicum] 174 4e-41
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 171 3e-40
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 171 3e-40
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 159 1e-36
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 158 2e-36
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 154 5e-35
ref|XP_003589437.1| hypothetical protein MTR_1g024320 [Medicago ... 154 5e-35
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 209 bits (533), Expect = 7e-52
Identities = 119/248 (47%), Positives = 164/248 (66%), Gaps = 2/248 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
+P++SL++G D GI ALAR+YVLLLFS+ II + QLP+ L +AMRDVL +A R
Sbjct: 386 IPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVS 445
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPT-N 427
L DWK KE PD+ FI+LNP +V++Q++ WER+EK I + G +NRP K S T N
Sbjct: 446 LNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNN 505
Query: 426 LVESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMAL 247
SK K + + + M EE REA+ KALQKLF+S K C FQQI RLR MA+
Sbjct: 506 PATSKSLSKHASNSLNAGVPRRPMSEETREALPKALQKLFQSHKVC-FQQICQRLREMAV 564
Query: 246 SENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
SE++R +G A E +AA ++A P ELQAIIS+VA+N+HG+ V SS + ++D+ VV
Sbjct: 565 SESSRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGVYVLKSSPVHPEHDEF--VV 622
Query: 66 IDLFLAEG 43
+L +++G
Sbjct: 623 QELCVSQG 630
>ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595101 isoform X4 [Solanum
tuberosum] gi|565401172|ref|XP_006366086.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X5 [Solanum
tuberosum] gi|565401174|ref|XP_006366087.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X6 [Solanum
tuberosum]
Length = 387
Score = 206 bits (524), Expect = 8e-51
Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+GT+ G+ LARN+VL F+K ++IK + P +KA L LA R
Sbjct: 93 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 152
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
L DWKLKE PD F L VV+++Q WE + K I L GGRNRP K P N
Sbjct: 153 LNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKN-----PLNP 207
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
+ G P+S S + M EE+REA+ KALQ++F++ K CSFQQI LR + +S
Sbjct: 208 NADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVS 267
Query: 243 ENARSRG-PATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
++ +G P A++D DA E+QA+I++VAVN+HG+ V SS DN YD +RKVV
Sbjct: 268 KSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVV 327
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
IDLF+AEGP+A+L+KA + EA
Sbjct: 328 IDLFMAEGPSAKLKKASVTEA 348
>ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595101 isoform X1 [Solanum
tuberosum] gi|565401166|ref|XP_006366083.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X2 [Solanum
tuberosum] gi|565401168|ref|XP_006366084.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X3 [Solanum
tuberosum]
Length = 426
Score = 206 bits (524), Expect = 8e-51
Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+GT+ G+ LARN+VL F+K ++IK + P +KA L LA R
Sbjct: 132 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 191
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
L DWKLKE PD F L VV+++Q WE + K I L GGRNRP K P N
Sbjct: 192 LNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKN-----PLNP 246
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
+ G P+S S + M EE+REA+ KALQ++F++ K CSFQQI LR + +S
Sbjct: 247 NADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVS 306
Query: 243 ENARSRG-PATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
++ +G P A++D DA E+QA+I++VAVN+HG+ V SS DN YD +RKVV
Sbjct: 307 KSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVV 366
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
IDLF+AEGP+A+L+KA + EA
Sbjct: 367 IDLFMAEGPSAKLKKASVTEA 387
>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X2 [Solanum tuberosum]
Length = 657
Score = 206 bits (524), Expect = 8e-51
Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+GT+ G+ LARN+VL F+K ++IK + P +KA L LA R
Sbjct: 363 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 422
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
L DWKLKE PD F L VV+++Q WE + K I L GGRNRP K P N
Sbjct: 423 LNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKN-----PLNP 477
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
+ G P+S S + M EE+REA+ KALQ++F++ K CSFQQI LR + +S
Sbjct: 478 NADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVS 537
Query: 243 ENARSRG-PATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
++ +G P A++D DA E+QA+I++VAVN+HG+ V SS DN YD +RKVV
Sbjct: 538 KSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVV 597
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
IDLF+AEGP+A+L+KA + EA
Sbjct: 598 IDLFMAEGPSAKLKKASVTEA 618
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 206 bits (524), Expect = 8e-51
Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+GT+ G+ LARN+VL F+K ++IK + P +KA L LA R
Sbjct: 375 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 434
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
L DWKLKE PD F L VV+++Q WE + K I L GGRNRP K P N
Sbjct: 435 LNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKN-----PLNP 489
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
+ G P+S S + M EE+REA+ KALQ++F++ K CSFQQI LR + +S
Sbjct: 490 NADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVS 549
Query: 243 ENARSRG-PATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
++ +G P A++D DA E+QA+I++VAVN+HG+ V SS DN YD +RKVV
Sbjct: 550 KSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVV 609
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
IDLF+AEGP+A+L+KA + EA
Sbjct: 610 IDLFMAEGPSAKLKKASVTEA 630
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 206 bits (523), Expect = 1e-50
Identities = 119/261 (45%), Positives = 161/261 (61%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+GT+ G+ LARN+VL F+K ++IK + P +KA L LA R
Sbjct: 375 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 434
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
L DWKLKE PD F L VV++QQ WE + K I L GGR RP K P N
Sbjct: 435 LNDWKLKEHPDKKFENLYGDVVREQQATWECLGKQINDVLPGGRTRPTMKN-----PINR 489
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
+ G P+S S + M EE+REA+ KALQ++F++ K CSFQQI LR + +S
Sbjct: 490 NADITALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVS 549
Query: 243 ENARSRG-PATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
++ +G P A+VD DA E+QA+I++VAVN+HG+ V SS DN YD +RK+V
Sbjct: 550 KSYPPKGAPRKAITASVDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIV 609
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
IDLF+AEGP+A+L+KA + EA
Sbjct: 610 IDLFMAEGPSAKLKKASVTEA 630
>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
Length = 666
Score = 204 bits (519), Expect = 3e-50
Identities = 123/261 (47%), Positives = 158/261 (60%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHG-TDGIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+G DG LAR++VL FSK IK + P KA L LA R
Sbjct: 387 VPKSSLVYGRNDGHEVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPD 446
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
L DWKLKE PD F L +VK+QQ WER+ K I L+GGRNRP K P+N
Sbjct: 447 LNDWKLKEHPDKEFENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKN-----PSNP 501
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
+ G P+ S ++ M E REA++KALQK+F++ K CSFQQI RLR A+S
Sbjct: 502 SAGIPALPSGGKPTPRSVTRTSMSERTREALQKALQKVFRTHKVCSFQQIRLRLREAAVS 561
Query: 243 ENARSRGPATETVAAVDSI-DAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
EN R +G A VAA + DA P ELQA+I +VA N+HG V SS DN YD +RKVV
Sbjct: 562 ENDRPKGNAKGAVAAASFVDDAPPEELQAVIDQVAFNIHGDYVLKSSPDNPQYDALRKVV 621
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
++L + EGP+A+L+KA I++A
Sbjct: 622 VELLIGEGPSAKLKKATIMKA 642
>gb|EPS66723.1| hypothetical protein M569_08053 [Genlisea aurea]
Length = 599
Score = 186 bits (472), Expect = 8e-45
Identities = 112/260 (43%), Positives = 158/260 (60%), Gaps = 2/260 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+GTD G LAR+YVLLLF+K+V I + +L + P L AM++VL +A R
Sbjct: 306 VPKSSLVYGTDHGNEVLARDYVLLLFTKNVCINNAELRQQPKLSGAMKEVLKVVAEERPA 365
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSI-ESSLSGGRNRPGAKTSKSSAPTN 427
DWKLK PD FI+++P VVKKQ + W +E +I E N+PG KT+ +S ++
Sbjct: 366 FNDWKLKVPPDSEFIKMHPEVVKKQDDEWGNIENNINELPWFRRNNKPGTKTAATSK-SS 424
Query: 426 LVESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMAL 247
S+ K+ A S T R+AI + L KLFK K CSFQQ++ LR + +
Sbjct: 425 AAGSQAKPKVAADKLSSQT---------RDAINEVLHKLFKRDKVCSFQQVVQSLRAIVI 475
Query: 246 SENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
S+ + T AA + + A +ELQAII+E VN+HGI V SS D+ +Y+ R+VV
Sbjct: 476 SKIRKESSTGGSTSAAANVLTASSDELQAIINEAVVNIHGIGVLKSSLDHPEYNPFREVV 535
Query: 66 IDLFLAEGPNARLRKAHIIE 7
I LF E PNA+L++A II+
Sbjct: 536 IKLFSGEPPNAKLKRAAIID 555
>gb|ABU45174.1| unknown [Solanum melongena]
Length = 664
Score = 183 bits (465), Expect = 5e-44
Identities = 107/261 (40%), Positives = 151/261 (57%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+ T+ G+ LARNYVL F+K +IK + P +KA L LA R
Sbjct: 393 VPKSSLVYDTNNGVEVLARNYVLYEFTKSTLIKKSVFGRRPEFLKAATQALKSLAIERPD 452
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
+ DWKL+ELPD F L VV++QQ +WE + K I + GGRNRP K P N
Sbjct: 453 MNDWKLRELPDKKFENLYGDVVREQQAIWETMGKQINDIIHGGRNRPTVKN-----PLNP 507
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
+ + G P + + + EE+REA+ KALQ +F+ K CS QQI +
Sbjct: 508 KANIPAVASGDKPIHNTFLRTSISEEIREALLKALQNVFRIHKVCSLQQICETI------ 561
Query: 243 ENARSRGPATETVAAVDSI-DAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
+G + + V + DA E++A+++ +AVN+HG+ + SS DN YD +RKVV
Sbjct: 562 -----KGDSKKAVTGTTGVSDAPKEEIEAVVNRIAVNIHGVYILRSSPDNPQYDALRKVV 616
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
IDLF+AEGP+A+L+KA IIEA
Sbjct: 617 IDLFMAEGPSAKLKKASIIEA 637
>gb|ABU45208.1| unknown [Solanum bulbocastanum]
Length = 654
Score = 182 bits (463), Expect = 9e-44
Identities = 111/261 (42%), Positives = 151/261 (57%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SLV+ T+ G+ LARN+VL F+K+ +IK + P +KA VL LA R
Sbjct: 383 VPKSSLVYDTNNGVEVLARNFVLYEFTKNTLIKKSVFGRRPEFLKAATPVLKSLAVERPD 442
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAP-TN 427
L DWKLKELPD F L VV++QQ +W+ + K I L GGRNRP T K+ P N
Sbjct: 443 LDDWKLKELPDKKFENLYGDVVREQQAIWDSMGKQINDILHGGRNRP---TMKNPLPKAN 499
Query: 426 LVESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMAL 247
L S K P+ + + M EE+R A+ KALQ +F+ K CS QI
Sbjct: 500 LPALSSSDK----PTPTTFLRTSMSEEIRGALPKALQNIFRIHKVCSLLQI--------- 546
Query: 246 SENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
E P +A DA E++A+++++AVN+HG+ V SS DN YD +RKVV
Sbjct: 547 CEMMEKEDPKKAIIAPTGVSDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVV 606
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
IDLF+AEG +A+L+KA I+EA
Sbjct: 607 IDLFMAEGSSAKLKKASIVEA 627
>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
lycopersicum]
Length = 659
Score = 176 bits (445), Expect = 1e-41
Identities = 105/260 (40%), Positives = 148/260 (56%), Gaps = 1/260 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
V ++SLV+ T+ G+ LARN+VL F+K +IK + P +KA VL LA R
Sbjct: 374 VAKSSLVYDTNNGVEVLARNFVLYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPD 433
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
L DWKLKELPD F L VV++Q+ +WE + K I + GGRNRP K + + N+
Sbjct: 434 LDDWKLKELPDKKFENLYGDVVREQEAIWESMGKQINDIMHGGRNRPTLK-NPLNPKANI 492
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
S K P+ + + + EE+R A+ KALQ +F+ K CS QI
Sbjct: 493 PALSSSDK----PTPTTFLRTSLSEEIRGALPKALQNVFRIHKVCSLLQI---------C 539
Query: 243 ENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVVI 64
E P ++ DA E++A+++++AVN+HG+ V SS DN YD +RKVVI
Sbjct: 540 ELMEKEDPMKAIISPAGISDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVI 599
Query: 63 DLFLAEGPNARLRKAHIIEA 4
DLF+AEG NA+L+KA I+EA
Sbjct: 600 DLFMAEGSNAKLKKASIVEA 619
>ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X3 [Solanum tuberosum]
Length = 577
Score = 174 bits (442), Expect = 2e-41
Identities = 101/221 (45%), Positives = 134/221 (60%), Gaps = 1/221 (0%)
Frame = -2
Query: 663 PPLVKAMRDVLVGLATYRNKLKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSL 484
P +KA L LA R L DWKLKE PD F L VV+++Q WE + K I L
Sbjct: 323 PEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVL 382
Query: 483 SGGRNRPGAKTSKSSAPTNLVESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFK 304
GGRNRP K P N + G P+S S + M EE+REA+ KALQ++F+
Sbjct: 383 PGGRNRPTMKN-----PLNPNADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFR 437
Query: 303 STKTCSFQQIIPRLRVMALSENARSRG-PATETVAAVDSIDAYPNELQAIISEVAVNVHG 127
+ K CSFQQI LR + +S++ +G P A++D DA E+QA+I++VAVN+HG
Sbjct: 438 TYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHG 497
Query: 126 ICVPISSHDNKDYDKIRKVVIDLFLAEGPNARLRKAHIIEA 4
+ V SS DN YD +RKVVIDLF+AEGP+A+L+KA + EA
Sbjct: 498 VYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEA 538
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 174 bits (441), Expect = 3e-41
Identities = 106/265 (40%), Positives = 150/265 (56%), Gaps = 7/265 (2%)
Frame = -2
Query: 777 PRTSLVHGTDGIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNKLK 598
P++SL+ R+YVLLLFSK+++I Q+ P + + ++ L A R K
Sbjct: 384 PKSSLLFPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFK 443
Query: 597 DWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPT---- 430
DWK KE D FI+L P +VKKQ+E W+ EK + +R G + K++ P
Sbjct: 444 DWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKVF----DRSGKASMKNAIPKPPMV 499
Query: 429 -NLVESKGSGKLGAGPSSGST--SQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLR 259
N V+ S K +SG ++ + E REA+ KAL K+F+S K CSFQ I LR
Sbjct: 500 HNTVKHLDSEKSMPKIASGMRRLTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLR 559
Query: 258 VMALSENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKI 79
+A+S++ + VAA DA P ELQ IIS+VA N+HG V SS ++ YD++
Sbjct: 560 DLAVSQSTLPKADPRIAVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDEL 619
Query: 78 RKVVIDLFLAEGPNARLRKAHIIEA 4
RKV+IDL LA GPNA+L+KA + EA
Sbjct: 620 RKVIIDLLLARGPNAKLKKAEVFEA 644
>gb|AAG01125.1|AF273333_10 BAC19.10 [Solanum lycopersicum]
Length = 683
Score = 174 bits (440), Expect = 4e-41
Identities = 102/260 (39%), Positives = 150/260 (57%), Gaps = 1/260 (0%)
Frame = -2
Query: 780 VPRTSLVHGTD-GIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
V ++SLV+ T+ G+ LARN+VL F+K +IK + P +KA VL LA R
Sbjct: 357 VAKSSLVYDTNNGVEVLARNFVLYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPD 416
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
L DWKLKELPD F L VV++Q+ +WE + K I + GGRNRP K + + N+
Sbjct: 417 LDDWKLKELPDKKFENLYGDVVREQEAIWESMGKQINDIMHGGRNRPTLK-NPLNPKANI 475
Query: 423 VESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMALS 244
S K P+ + + + EE+R A+ KALQ +F+ K C ++ ++ +
Sbjct: 476 PALSSSDK----PTPTTFLRTSLSEEIRGALPKALQNVFRIHKVCRIYCLL-FASLLQIC 530
Query: 243 ENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVVI 64
E P ++ DA E++A+++++AVN+HG+ V SS DN YD +RKVVI
Sbjct: 531 ELMEKEDPMKAIISPAGISDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVI 590
Query: 63 DLFLAEGPNARLRKAHIIEA 4
DLF+AEG NA+L+KA I+EA
Sbjct: 591 DLFMAEGSNAKLKKASIVEA 610
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 171 bits (433), Expect = 3e-40
Identities = 106/263 (40%), Positives = 160/263 (60%), Gaps = 4/263 (1%)
Frame = -2
Query: 780 VPRTSLVH-GTDGIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SL+ G G+A LAR+Y+LLLFSK +I Q+ P L KA++ L LA R
Sbjct: 373 VPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPS 432
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
+DWK KE D++F++L+P +V++Q+ +WE +EK I + GG R G T S P+
Sbjct: 433 FRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGG-GRRGPVTKNSGKPSIA 491
Query: 423 VESKGSGKL-GAGPSSGST--SQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVM 253
++ S K GA ++ T + M E REA+ KAL+++F+ K CSFQ I LR +
Sbjct: 492 NKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDL 551
Query: 252 ALSENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRK 73
A+S++ + VAA DA EL AIIS+ A VHG+ V +S ++ +++ +RK
Sbjct: 552 AVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRK 610
Query: 72 VVIDLFLAEGPNARLRKAHIIEA 4
VV+DLF + PNA+L++A I+EA
Sbjct: 611 VVVDLFCGKEPNAKLKRADIMEA 633
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 171 bits (433), Expect = 3e-40
Identities = 106/263 (40%), Positives = 160/263 (60%), Gaps = 4/263 (1%)
Frame = -2
Query: 780 VPRTSLVH-GTDGIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNK 604
VP++SL+ G G+A LAR+Y+LLLFSK +I Q+ P L KA++ L LA R
Sbjct: 389 VPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPS 448
Query: 603 LKDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLSGGRNRPGAKTSKSSAPTNL 424
+DWK KE D++F++L+P +V++Q+ +WE +EK I + GG R G T S P+
Sbjct: 449 FRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGG-GRRGPVTKNSGKPSIA 507
Query: 423 VESKGSGKL-GAGPSSGST--SQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVM 253
++ S K GA ++ T + M E REA+ KAL+++F+ K CSFQ I LR +
Sbjct: 508 NKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDL 567
Query: 252 ALSENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRK 73
A+S++ + VAA DA EL AIIS+ A VHG+ V +S ++ +++ +RK
Sbjct: 568 AVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRK 626
Query: 72 VVIDLFLAEGPNARLRKAHIIEA 4
VV+DLF + PNA+L++A I+EA
Sbjct: 627 VVVDLFCGKEPNAKLKRADIMEA 649
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 159 bits (401), Expect = 1e-36
Identities = 96/261 (36%), Positives = 141/261 (54%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTDGIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNKL 601
VP++ + DG AR++VL LFSK+ ++ Q+ P L ++ L R
Sbjct: 403 VPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAF 462
Query: 600 KDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLS-GGRNRPGAKTSKSSAPTNL 424
KDWK KE D F+ + + +KQ+E+W VEK S + A T K L
Sbjct: 463 KDWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKL 522
Query: 423 VESKGSGKLGAGPSSGSTSQN-VMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMAL 247
+ S + S+ ++ M +E REA+ KALQKLF++ K CSFQ I LR +A+
Sbjct: 523 EKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAV 582
Query: 246 SENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
S++ + A VAA +DA P+EL+ IIS+VA +HG+ V SS ++ +YD +RKVV
Sbjct: 583 SQSTLPKADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVV 642
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
I L GP A L+KA ++EA
Sbjct: 643 IQLLRGRGPKAVLKKADVLEA 663
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 158 bits (399), Expect = 2e-36
Identities = 96/261 (36%), Positives = 140/261 (53%), Gaps = 2/261 (0%)
Frame = -2
Query: 780 VPRTSLVHGTDGIAALARNYVLLLFSKDVIIKDEQLPKPPPLVKAMRDVLVGLATYRNKL 601
VP++ + DG AR++VL LFSK+ ++ Q+ P L ++ L R
Sbjct: 403 VPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAF 462
Query: 600 KDWKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLS-GGRNRPGAKTSKSSAPTNL 424
KDWK KE D F+ + + +KQ+E+W VEK S + A T K L
Sbjct: 463 KDWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKL 522
Query: 423 VESKGSGKLGAGPSSGSTSQN-VMPEEVREAIKKALQKLFKSTKTCSFQQIIPRLRVMAL 247
+ S + S+ ++ M +E REA+ KALQKLF++ K CSFQ I LR +A+
Sbjct: 523 EKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAV 582
Query: 246 SENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYDKIRKVV 67
S++ + A VAA +DA P+EL IIS+VA +HG+ V SS ++ +YD +RKVV
Sbjct: 583 SQSTLPKADARMAVAAAYGVDAPPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVV 642
Query: 66 IDLFLAEGPNARLRKAHIIEA 4
I L GP A L+KA ++EA
Sbjct: 643 IQLLRGRGPKAVLKKADVLEA 663
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 154 bits (388), Expect = 5e-35
Identities = 98/267 (36%), Positives = 147/267 (55%), Gaps = 8/267 (2%)
Frame = -2
Query: 780 VPRTSLVHGTDGIAALARNYVLLLFSKDVIIKDEQLPK--PPPLVKAMRDVLVGLATYRN 607
VPR+SL+ T GI +LARNY+L+ F K + +K ++L + L M+ ++ A +
Sbjct: 382 VPRSSLLFPTGGIESLARNYILVRFHKSLTVKSDELRRLGGGELGNRMKHFVMQFALEKF 441
Query: 606 KLKD----WKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLS--GGRNRPGAKTSK 445
LK WK KELPD +FI+ P VVKKQ+E+++ +E + S + GG+ + + +
Sbjct: 442 DLKSKENYWKFKELPDESFIKEFPIVVKKQEEIFKILENEVNSIIGTLGGKRKLKSAITN 501
Query: 444 SSAPTNLVESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPR 265
S L S S M E R A+ AL+KLF++ K CSFQ I
Sbjct: 502 SGVNNALFTSTNSDPRATSLGEDPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLICQE 561
Query: 264 LRVMALSENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYD 85
LR +AL++ +G + +V A +S+D +EL+AI+ EVA ++HG C + S N D
Sbjct: 562 LRGLALAQTMLPKGGSKMSVDAANSLDVPQDELKAILGEVACDIHG-CYVLKSAQN---D 617
Query: 84 KIRKVVIDLFLAEGPNARLRKAHIIEA 4
R VVID+ GPN +L+KA I+EA
Sbjct: 618 PFRDVVIDMLRGSGPNGKLKKAEILEA 644
>ref|XP_003589437.1| hypothetical protein MTR_1g024320 [Medicago truncatula]
gi|355478485|gb|AES59688.1| hypothetical protein
MTR_1g024320 [Medicago truncatula]
Length = 406
Score = 154 bits (388), Expect = 5e-35
Identities = 98/267 (36%), Positives = 147/267 (55%), Gaps = 8/267 (2%)
Frame = -2
Query: 780 VPRTSLVHGTDGIAALARNYVLLLFSKDVIIKDEQLPK--PPPLVKAMRDVLVGLATYRN 607
VPR+SL+ T GI +LARNY+L+ F K + +K ++L + L M+ ++ A +
Sbjct: 105 VPRSSLLFPTGGIESLARNYILVRFHKSLTVKSDELRRLGGGELGNRMKHFVMQFALEKF 164
Query: 606 KLKD----WKLKELPDLNFIRLNPAVVKKQQEMWERVEKSIESSLS--GGRNRPGAKTSK 445
LK WK KELPD +FI+ P VVKKQ+E+++ +E + S + GG+ + + +
Sbjct: 165 DLKSKENYWKFKELPDESFIKEFPIVVKKQEEIFKILENEVNSIIGTLGGKRKLKSAITN 224
Query: 444 SSAPTNLVESKGSGKLGAGPSSGSTSQNVMPEEVREAIKKALQKLFKSTKTCSFQQIIPR 265
S L S S M E R A+ AL+KLF++ K CSFQ I
Sbjct: 225 SGVNNALFTSTNSDPRATSLGEDPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLICQE 284
Query: 264 LRVMALSENARSRGPATETVAAVDSIDAYPNELQAIISEVAVNVHGICVPISSHDNKDYD 85
LR +AL++ +G + +V A +S+D +EL+AI+ EVA ++HG C + S N D
Sbjct: 285 LRGLALAQTMLPKGGSKMSVDAANSLDVPQDELKAILGEVACDIHG-CYVLKSAQN---D 340
Query: 84 KIRKVVIDLFLAEGPNARLRKAHIIEA 4
R VVID+ GPN +L+KA I+EA
Sbjct: 341 PFRDVVIDMLRGSGPNGKLKKAEILEA 367