BLASTX nr result

ID: Mentha24_contig00037109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00037109
         (342 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...   181   9e-44
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   158   6e-37
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   154   9e-36
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   154   1e-35
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   151   8e-35
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              149   4e-34
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   149   4e-34
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   149   5e-34
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   148   7e-34
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   148   7e-34
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   148   7e-34
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   148   7e-34
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   146   3e-33
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...   143   2e-32
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana...   141   1e-31
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   140   1e-31
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   139   3e-31
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   139   3e-31
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   139   3e-31
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...   139   5e-31

>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score =  181 bits (459), Expect = 9e-44
 Identities = 90/113 (79%), Positives = 105/113 (92%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM+A+  I+TP+LTCPF
Sbjct: 1195 EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSASEVIKTPLLTCPF 1254

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQLSINQRKVARTYKLKMKLKETE 2
            S++RSKR+VV+LV+ VKKVSVADL+E+M+VQLS+N +  AR YKLKM LK+TE
Sbjct: 1255 SQWRSKREVVSLVSHVKKVSVADLIENMEVQLSVNHKTAARVYKLKMTLKDTE 1307


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  158 bits (400), Expect = 6e-37
 Identities = 78/113 (69%), Positives = 99/113 (87%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGVIAAQS+GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+  IRTP+LTCPF
Sbjct: 1105 EPVGVIAAQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEVIRTPMLTCPF 1164

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQLSINQRKVARTYKLKMKLKETE 2
             + +SK + +++++ +KK+++ADL+ESM V +S +  KV R YKL+M+LK+TE
Sbjct: 1165 LQRQSKPNALSVISNLKKITIADLIESMDVSISFHP-KVGRIYKLRMRLKDTE 1216


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  154 bits (390), Expect = 9e-36
 Identities = 79/114 (69%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+  I+TPILTCPF
Sbjct: 1157 EPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPILTCPF 1216

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQ---LSINQRKVARTYKLKMKLKE 8
              ++SK D  +L+ KVKK++VAD++ESM+V+   LSI   +V++ YKL +KLK+
Sbjct: 1217 LGWQSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKK 1270


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  154 bits (389), Expect = 1e-35
 Identities = 78/114 (68%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+  I+TPI+TCPF
Sbjct: 1157 EPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPIMTCPF 1216

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQ---LSINQRKVARTYKLKMKLKE 8
              ++SK D  +L+ KVKK++VAD++ESM+V+   LSI   +V++ YKL +KLK+
Sbjct: 1217 LGWKSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKK 1270


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
           gi|550335519|gb|ERP58815.1| hypothetical protein
           POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  151 bits (382), Expect = 8e-35
 Identities = 77/112 (68%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340 EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
           EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ +I+TPI+TCP 
Sbjct: 582 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIKTPIMTCPL 641

Query: 160 SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKL 14
            E R+K D   L  K+KKV+VAD++ESM+V +   ++    + R YKLKMKL
Sbjct: 642 HEGRTKEDAERLSDKLKKVTVADIVESMEVSVMPFAVQNDDICRIYKLKMKL 693


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  149 bits (376), Expect = 4e-34
 Identities = 77/114 (67%), Positives = 90/114 (78%), Gaps = 3/114 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTAA +I+TPI+TCP 
Sbjct: 1148 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPL 1207

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKLKE 8
               RSK D   L  K+KKV+VAD+ ESM+V +   ++   +    YKLKMKL E
Sbjct: 1208 QMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYE 1261


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  149 bits (376), Expect = 4e-34
 Identities = 77/114 (67%), Positives = 90/114 (78%), Gaps = 3/114 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTAA +I+TPI+TCP 
Sbjct: 1219 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPL 1278

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKLKE 8
               RSK D   L  K+KKV+VAD+ ESM+V +   ++   +    YKLKMKL E
Sbjct: 1279 QMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYE 1332


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  149 bits (375), Expect = 5e-34
 Identities = 77/112 (68%), Positives = 91/112 (81%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ +I+TPI+TCP 
Sbjct: 1149 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIMTCPL 1208

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKL 14
             E R+  D   L  K++KV+VAD++ESM+V +   +I    V R YKLKMKL
Sbjct: 1209 QEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKL 1260


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  148 bits (374), Expect = 7e-34
 Identities = 73/112 (65%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ +IRTP++TCP 
Sbjct: 868  EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPL 927

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKL 14
             + ++K D + L  K+KK++VAD+LESM+V +   +++   +   YKLKM L
Sbjct: 928  HKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMML 979


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  148 bits (374), Expect = 7e-34
 Identities = 73/112 (65%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ +IRTP++TCP 
Sbjct: 871  EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPL 930

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKL 14
             + ++K D + L  K+KK++VAD+LESM+V +   +++   +   YKLKM L
Sbjct: 931  HKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMML 982


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  148 bits (374), Expect = 7e-34
 Identities = 73/112 (65%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ +IRTP++TCP 
Sbjct: 1160 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPL 1219

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKL 14
             + ++K D + L  K+KK++VAD+LESM+V +   +++   +   YKLKM L
Sbjct: 1220 HKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMML 1271


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  148 bits (374), Expect = 7e-34
 Identities = 73/112 (65%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ +IRTP++TCP 
Sbjct: 1163 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPL 1222

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKL 14
             + ++K D + L  K+KK++VAD+LESM+V +   +++   +   YKLKM L
Sbjct: 1223 HKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMML 1274


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  146 bits (368), Expect = 3e-33
 Identities = 75/116 (64%), Positives = 89/116 (76%), Gaps = 3/116 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAA +I+TP++TCP 
Sbjct: 1070 EPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANDIKTPVMTCPL 1129

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMK---VQLSINQRKVARTYKLKMKLKETE 2
             + RSK +   L  K+KK++VAD++ESMK   V   I   +  R YKL+M L   E
Sbjct: 1130 QKGRSKEEAQELADKLKKITVADIIESMKVTFVPFFIQDGQTCRIYKLEMTLHVPE 1185


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score =  143 bits (361), Expect = 2e-32
 Identities = 71/116 (61%), Positives = 95/116 (81%), Gaps = 3/116 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAA NI+TPI+TCP 
Sbjct: 1177 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPL 1236

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINQRKVARTYKLKMKLKETE 2
             + ++  D   +  K++K++VAD+++SM+V +   ++++ +V   +KLK+KL + E
Sbjct: 1237 LKGKTTDDAKKITDKLRKIAVADIIKSMEVSVIPYAVHEGEVCSIHKLKIKLYKPE 1292


>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
            gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
            190K chain-like protein [Arabidopsis thaliana]
            gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
            [Arabidopsis thaliana]
          Length = 1670

 Score =  141 bits (355), Expect = 1e-31
 Identities = 70/116 (60%), Positives = 93/116 (80%), Gaps = 3/116 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAA NI+TPI+TCP 
Sbjct: 1156 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPL 1215

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMK---VQLSINQRKVARTYKLKMKLKETE 2
             + ++K D   +  +++K++VAD+++SM+   V  ++ + +V   +KLK+ L + E
Sbjct: 1216 LKGKTKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPE 1271


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  140 bits (354), Expect = 1e-31
 Identities = 70/116 (60%), Positives = 92/116 (79%), Gaps = 3/116 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEILM AA +I+TP +TCP 
Sbjct: 1126 EPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMTCPL 1185

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQ---LSINQRKVARTYKLKMKLKETE 2
               +S +D + L  K+KK++VAD+++SMKV    +++   +V   YKL MKL +++
Sbjct: 1186 RHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSK 1241


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  139 bits (351), Expect = 3e-31
 Identities = 68/112 (60%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEIL  A+ +I+TP +TCP 
Sbjct: 1127 EPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAHIKTPFMTCPL 1186

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQ---LSINQRKVARTYKLKMKL 14
               +S  D + L  K+KK++VAD++ESMKV    +++   ++   YKL MKL
Sbjct: 1187 RPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMMKL 1238


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  139 bits (351), Expect = 3e-31
 Identities = 68/112 (60%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEIL  A+ +I+TP +TCP 
Sbjct: 1123 EPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAHIKTPFMTCPL 1182

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQ---LSINQRKVARTYKLKMKL 14
               +S  D + L  K+KK++VAD++ESMKV    +++   ++   YKL MKL
Sbjct: 1183 RPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMMKL 1234


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score =  139 bits (351), Expect = 3e-31
 Identities = 67/112 (59%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRL EI++ A+ NI+TP +TCP 
Sbjct: 1114 EPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLHEIVVAASKNIKTPFMTCPL 1173

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMKVQ---LSINQRKVARTYKLKMKL 14
               +S  D + L  K+KK++VAD++ESMKV    +++ + ++   YKL MKL
Sbjct: 1174 RPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVAVKEGRICSIYKLTMKL 1225


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score =  139 bits (349), Expect = 5e-31
 Identities = 69/116 (59%), Positives = 92/116 (79%), Gaps = 3/116 (2%)
 Frame = -3

Query: 340  EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAATNIRTPILTCPF 161
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAA +I+TPI+TCP 
Sbjct: 1144 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMTCPL 1203

Query: 160  SEFRSKRDVVALVTKVKKVSVADLLESMK---VQLSINQRKVARTYKLKMKLKETE 2
             + ++K D   +  K++K++VAD+++ M+   V  +I++  +   +KLK+ L + E
Sbjct: 1204 LKGKTKEDANDITDKLRKITVADIIKDMELSVVPYTIHKNDICSIHKLKINLYKPE 1259


Top