BLASTX nr result

ID: Mentha24_contig00036980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00036980
         (345 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU46682.1| hypothetical protein MIMGU_mgv1a024383mg [Mimulus...   121   1e-25
ref|XP_006359387.1| PREDICTED: DNA mismatch repair protein PMS1-...    63   4e-08
ref|XP_004247536.1| PREDICTED: mismatch repair endonuclease pms1...    59   7e-07
ref|XP_006444299.1| hypothetical protein CICLE_v100188991mg, par...    57   2e-06
ref|XP_006480112.1| PREDICTED: DNA mismatch repair protein PMS1-...    57   3e-06

>gb|EYU46682.1| hypothetical protein MIMGU_mgv1a024383mg [Mimulus guttatus]
          Length = 876

 Score =  121 bits (303), Expect = 1e-25
 Identities = 66/114 (57%), Positives = 79/114 (69%)
 Frame = -3

Query: 343 EQKAQVRVVDDNSVPTASVSANPQHIPHDLLDAPIPLQSSGVSTDAAVVCSGSKVGFTLQ 164
           + KAQ RV+DD+S   AS S N +  P+D  D PIPLQSSG +TD+ ++ SG KVGFTLQ
Sbjct: 540 DHKAQERVLDDDSALNASASTNSKLSPNDPSDVPIPLQSSGAATDSPMISSGPKVGFTLQ 599

Query: 163 FRFEDLVXXXXXXXXXXKYMSHTSQSLKLQGGFAAASLELSQGVNEEGKAKALA 2
           F  +DL+          + M+H S   KLQGGFAAASLELSQ VNEEGKAKALA
Sbjct: 600 FSVKDLMSRSKQRLSRLRCMNHASGRFKLQGGFAAASLELSQVVNEEGKAKALA 653


>ref|XP_006359387.1| PREDICTED: DNA mismatch repair protein PMS1-like [Solanum
           tuberosum]
          Length = 939

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/100 (36%), Positives = 55/100 (55%)
 Frame = -3

Query: 304 VPTASVSANPQHIPHDLLDAPIPLQSSGVSTDAAVVCSGSKVGFTLQFRFEDLVXXXXXX 125
           VP  S   N  ++  +++DA    Q + ++ D     S SK+  TLQF  ++LV      
Sbjct: 614 VPLDSTCNNIHNVSENMVDASSSEQPASLTLDPPKASSNSKIASTLQFSVKELVSRRNQR 673

Query: 124 XXXXKYMSHTSQSLKLQGGFAAASLELSQGVNEEGKAKAL 5
               + ++HTSQ +K +  +AAA+LELS   NEE KA+AL
Sbjct: 674 LSRLQLLNHTSQRMKTKRDYAAATLELSGSENEEAKARAL 713


>ref|XP_004247536.1| PREDICTED: mismatch repair endonuclease pms1-like [Solanum
           lycopersicum]
          Length = 940

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -3

Query: 304 VPTASVSANPQHIPHDLLDAPIPLQSSGVSTD-AAVVCSGSKVGFTLQFRFEDLVXXXXX 128
           VP  S   N   +  + +DA    Q + ++ D A    S SK+  TLQF  ++LV     
Sbjct: 614 VPLDSTCNNIHDVSENRVDASSSEQPASLTLDDAPKASSNSKIASTLQFSVKELVSRRNQ 673

Query: 127 XXXXXKYMSHTSQSLKLQGGFAAASLELSQGVNEEGKAKAL 5
                + ++HTSQ++K +  +AAA+LELS   NEE KA+AL
Sbjct: 674 RLSRLQLLNHTSQTMKTKRDYAAATLELSGSENEEAKARAL 714


>ref|XP_006444299.1| hypothetical protein CICLE_v100188991mg, partial [Citrus
           clementina] gi|557546561|gb|ESR57539.1| hypothetical
           protein CICLE_v100188991mg, partial [Citrus clementina]
          Length = 400

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 SVPTASVSANP-QHIPHDLLDAPIPLQSSGVSTDAAVVCSGSKVGFTLQFRFEDLVXXXX 131
           +VP+   S+N  +    DL  A   LQ SG   DA V  S   +  TLQF  +DL     
Sbjct: 73  NVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQ 132

Query: 130 XXXXXXKYMSHTSQSLKLQGGFAAASLELSQGVNEEGKAKALA 2
                 +   HTS S+K++  FAAA+LELSQ  NEE KA+ALA
Sbjct: 133 QRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALA 175


>ref|XP_006480112.1| PREDICTED: DNA mismatch repair protein PMS1-like [Citrus sinensis]
          Length = 1058

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/103 (40%), Positives = 53/103 (51%)
 Frame = -3

Query: 310 NSVPTASVSANPQHIPHDLLDAPIPLQSSGVSTDAAVVCSGSKVGFTLQFRFEDLVXXXX 131
           N+    S S + +    DL  A   LQ SG   DA V  S   +  TLQF  +DL     
Sbjct: 597 NAPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQ 656

Query: 130 XXXXXXKYMSHTSQSLKLQGGFAAASLELSQGVNEEGKAKALA 2
                 +   HTS S+K++  FAAA+LELSQ  NEE KA+ALA
Sbjct: 657 QRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALA 699



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/103 (40%), Positives = 53/103 (51%)
 Frame = -3

Query: 310  NSVPTASVSANPQHIPHDLLDAPIPLQSSGVSTDAAVVCSGSKVGFTLQFRFEDLVXXXX 131
            N+    S S + +    DL  A   LQ SG   DA V  S   +  TLQF  +DL     
Sbjct: 731  NAPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQ 790

Query: 130  XXXXXXKYMSHTSQSLKLQGGFAAASLELSQGVNEEGKAKALA 2
                  +   HTS S+K++  FAAA+LELSQ  NEE KA+ALA
Sbjct: 791  QRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALA 833


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