BLASTX nr result
ID: Mentha24_contig00036638
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha24_contig00036638 (459 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU39080.1| hypothetical protein MIMGU_mgv1a000980mg [Mimulus... 60 3e-07 ref|XP_006352103.1| PREDICTED: pre-mRNA-processing protein 40A-l... 58 2e-06 ref|XP_004250825.1| PREDICTED: pre-mRNA-processing protein 40A-l... 56 5e-06 >gb|EYU39080.1| hypothetical protein MIMGU_mgv1a000980mg [Mimulus guttatus] Length = 923 Score = 60.1 bits (144), Expect = 3e-07 Identities = 46/145 (31%), Positives = 59/145 (40%), Gaps = 7/145 (4%) Frame = +1 Query: 40 MQYRPMVPPPQ--SFVQVAPQQFQPGVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 213 +Q+RP+ PPP SF+ + PQQFQP Sbjct: 26 LQFRPLAPPPPPPSFIPMGPQQFQP-----------------IGHSIQYPQAPPPLQPPP 68 Query: 214 LSGHGLPQGHPQQLQFSNNYMPSYGGPRPSHIPYNLSSSSGGQQQMNVAPN-----LNDA 378 L H LPQG P N++MP++ GP HI S SSGGQ Q NV ++ Sbjct: 69 LQRHVLPQGTP------NSFMPAFAGPGIPHI----SFSSGGQTQNNVVSTAQHLPMSQT 118 Query: 379 ANFPAGGQSWFPTGNQDMQPALPMQ 453 P WF +G + Q LPMQ Sbjct: 119 DAPPNFSAPWFSSGTHNTQSGLPMQ 143 >ref|XP_006352103.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum tuberosum] Length = 1003 Score = 57.8 bits (138), Expect = 2e-06 Identities = 46/153 (30%), Positives = 62/153 (40%), Gaps = 11/153 (7%) Frame = +1 Query: 34 MSMQYRPMVPPPQS--FVQVAPQQFQPGVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207 MS+Q++PM+PP Q+ +V + Q FQP Sbjct: 28 MSLQFQPMLPPQQAQPYVSGSSQHFQP------LGHANVVMPPQPSQIQFPQPMQQVAGR 81 Query: 208 XGLSGHGLPQGHPQQLQF------SNNYMPSYGGPR-PSHIPYNL--SSSSGGQQQMNVA 360 + GH + QG P F SNN+MP GGP P YN + SS Q Q + Sbjct: 82 PVVGGHSMSQGPPNPHDFQRNPPMSNNHMPGSGGPSFPLSSSYNQVNADSSSSQYQTQIH 141 Query: 361 PNLNDAANFPAGGQSWFPTGNQDMQPALPMQQT 459 + FP+G Q W PT N ++ A MQ T Sbjct: 142 DH-----RFPSGVQPWMPTSNHNVNSATTMQNT 169 >ref|XP_004250825.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum lycopersicum] Length = 1044 Score = 56.2 bits (134), Expect = 5e-06 Identities = 46/153 (30%), Positives = 62/153 (40%), Gaps = 11/153 (7%) Frame = +1 Query: 34 MSMQYRPMVPPPQS--FVQVAPQQFQPGVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207 MS+Q++PM+PP Q+ +V + Q FQP Sbjct: 28 MSLQFQPMLPPQQAQPYVSGSSQHFQP------LGHANVVMPPQPPQIQFPQPMQQVAGR 81 Query: 208 XGLSGHGLPQGHPQQLQF------SNNYMPSYGGPR-PSHIPYNL--SSSSGGQQQMNVA 360 + GH + QG P F SNN+M GGP P YN + SS Q Q + Sbjct: 82 PVVGGHNMSQGPPNPHDFQRNPPMSNNHMTGSGGPGFPLSSSYNQVNADSSSSQYQTQIH 141 Query: 361 PNLNDAANFPAGGQSWFPTGNQDMQPALPMQQT 459 + FP+G Q W PT NQ++ A MQ T Sbjct: 142 DH-----RFPSGVQPWMPTSNQNVNSATTMQNT 169