BLASTX nr result
ID: Mentha24_contig00036569
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00036569
(1142 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU39703.1| hypothetical protein MIMGU_mgv1a002729mg [Mimulus... 431 e-130
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 430 e-129
ref|XP_007045271.1| Cleavage and polyadenylation specificity fac... 423 e-129
ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prun... 411 e-125
emb|CBI26829.3| unnamed protein product [Vitis vinifera] 404 e-123
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 405 e-122
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul... 401 e-122
ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Popu... 401 e-122
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 399 e-120
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 394 e-119
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 388 e-118
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 387 e-117
ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr... 385 e-117
ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 377 e-115
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec... 378 e-114
ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 375 e-113
ref|NP_178282.2| cleavage and polyadenylation specificity factor... 372 e-112
ref|XP_007153236.1| hypothetical protein PHAVU_003G018200g [Phas... 368 e-112
ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutr... 370 e-112
ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Caps... 368 e-111
>gb|EYU39703.1| hypothetical protein MIMGU_mgv1a002729mg [Mimulus guttatus]
Length = 643
Score = 431 bits (1108), Expect(2) = e-130
Identities = 231/374 (61%), Positives = 272/374 (72%), Gaps = 26/374 (6%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
M+LDDYWE+TNLKVPIYFSAGLT+QAN+YYKILINWTSQKVKD + N FDFKNV SFD
Sbjct: 250 MILDDYWEKTNLKVPIYFSAGLTLQANMYYKILINWTSQKVKDTYTTRNPFDFKNVCSFD 309
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLI+APGPCVLFATP MISG FSL+VFK WAP E NLVTL GYC +GTIG KLM AK P
Sbjct: 310 RSLIHAPGPCVLFATPAMISG-FSLDVFKLWAPDERNLVTLTGYCGSGTIGRKLMVAKPP 368
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD++V++DVRCQI+QLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM LKE I
Sbjct: 369 TRITLDDNVQLDVRCQIYQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMVKLKEII 428
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRT----------DAS 359
+SEL I C +PAN+ET+ IPS+ IEA+ASDAFLQSCL PN KF +T D++
Sbjct: 429 ESELEIPCYHPANHETLHIPSTRRIEASASDAFLQSCLCPNFKFLKTDPRQDSELDDDSN 488
Query: 358 RPDTPPLLQVYDDRVAQGLL-TLQPDNKEHPRVVVT----LDEMRVENHQVKFVHCCSAT 194
P LQV ++RVAQGLL TLQ K R VVT +D + E H+ KF +CC
Sbjct: 489 NKRKMPQLQVCENRVAQGLLITLQ---KNQSRKVVTENELIDTIGTEIHEEKFAYCCPIY 545
Query: 193 HSDSLSEKDTLLHL-LYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREECR------- 38
+S S + HL L+GKL R+FPD + DC+ +++ SF S CS+ +C
Sbjct: 546 FPNSESRDISSFHLILFGKLSREFPDLNIQDCEDVIRI-QSFVGSFCSKAKCPYRTDVSF 604
Query: 37 ---IDAQHFCCTWS 5
+D HFCC WS
Sbjct: 605 QSVLDTVHFCCAWS 618
Score = 63.2 bits (152), Expect(2) = e-130
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLK VH CVA GGKVLIPTFALGRAQELC
Sbjct: 218 EREFLKVVHNCVAGGGKVLIPTFALGRAQELC 249
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 430 bits (1106), Expect(2) = e-129
Identities = 228/383 (59%), Positives = 277/383 (72%), Gaps = 35/383 (9%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
MLLDDYWER NLKVPIYFSAGLTIQAN+YYK+LINW SQKVK+ A NAFDFKNV SF+
Sbjct: 249 MLLDDYWERMNLKVPIYFSAGLTIQANMYYKVLINWASQKVKNLSATRNAFDFKNVHSFE 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RS+INAPGPCVLFATPGM+SGGFSLEVFKQWAP E+NL+ LPGYCLA T+GHKLM AK P
Sbjct: 309 RSMINAPGPCVLFATPGMLSGGFSLEVFKQWAPCEQNLIVLPGYCLAETVGHKLMRAKPP 368
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
+I +D+ +IDVRCQIHQLSFSPHTD+KGIMDL++FLSPK+VILVHGEKPKM +LKERI
Sbjct: 369 ARIDVDKSTQIDVRCQIHQLSFSPHTDSKGIMDLIRFLSPKNVILVHGEKPKMASLKERI 428
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPDTPPLL-- 335
+S+L I C YPANNE+ RI ++HYI+A AS +FLQS LSPN KF +T SR DT +L
Sbjct: 429 ESDLRIPCYYPANNESQRIETTHYIKAEASKSFLQSSLSPNFKFLKT-ISRADTGFVLNE 487
Query: 334 ------QVYDDRVAQGLLTLQPDNKEHPRVV---VTLDEMRVENHQVKFVHCCSATHSDS 182
QV DDRVA+G + +Q D +HP++V +D + ENH+V+ +CC D
Sbjct: 488 RAESCVQVCDDRVAEGAVIMQKD--QHPKIVHQNELMDILEAENHKVQVAYCCPVCVPDE 545
Query: 181 --------------LSEKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREE 44
+ +K +LLHLLY KL F D + + R+Q+ SF S C +E+
Sbjct: 546 PKNVALSPGEDMHPVLDKCSLLHLLYTKLSNGFQDVTILNDGDRLQI-QSFTVSPCLKEK 604
Query: 43 C--RI--------DAQHFCCTWS 5
C RI +A +FCCTWS
Sbjct: 605 CPHRIHVNPDSTSEAVNFCCTWS 627
Score = 60.8 bits (146), Expect(2) = e-129
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFL+A+HKCV +GGKVLIP FALGRAQELC
Sbjct: 217 EREFLEAIHKCVDSGGKVLIPAFALGRAQELC 248
>ref|XP_007045271.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao] gi|508709206|gb|EOY01103.1| Cleavage
and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao]
Length = 657
Score = 423 bits (1087), Expect(2) = e-129
Identities = 226/383 (59%), Positives = 273/383 (71%), Gaps = 35/383 (9%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LL+DYWER NLKVPIYFS+GLTIQAN+YYK+LINWTSQK+K+ +A HNAFDFKNV +FD
Sbjct: 248 ILLEDYWERMNLKVPIYFSSGLTIQANMYYKMLINWTSQKIKETYATHNAFDFKNVQNFD 307
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLINAPGPCVLFATPGMISGGFSLEVF QWAP E NL+TLPGYC+AGTIGHKLMS K P
Sbjct: 308 RSLINAPGPCVLFATPGMISGGFSLEVFMQWAPSEINLITLPGYCVAGTIGHKLMSGK-P 366
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+D ++DVRCQIHQLSFSPHTDAKGIMDLVKFLSPKH ILVHGEKPKM LKERI
Sbjct: 367 TKIDLDKDTQVDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHAILVHGEKPKMATLKERI 426
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTD--------ASRP 353
QSEL I+C PANN+TV IP++HY++A ASDAF++SCL+PN KFS++ ++
Sbjct: 427 QSELGIQCYCPANNDTVTIPTTHYVKADASDAFIKSCLNPNFKFSKSSSVDKSYSGSNDS 486
Query: 352 DTPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEMRVEN-HQVKFVHC-------CSA 197
P LQV D+RVA+G+L ++ K L M EN H+V+F +C
Sbjct: 487 KAIPGLQVSDERVAEGILVVEKGKKAKVIHQDELLHMLGENKHEVQFAYCFPMRTERLEK 546
Query: 196 THSDSLSEKD---------TLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREE 44
T S+ L D TL+ LL KL + D + D ++QV SF S+C ++
Sbjct: 547 TRSEDLPSADDLLCGLDKCTLISLLSTKLSNELSDGNIQDLGEQLQV-ESFCLSICLKDN 605
Query: 43 C--RI--------DAQHFCCTWS 5
C RI + FCC+WS
Sbjct: 606 CPHRISDSLQNDSEVVFFCCSWS 628
Score = 66.2 bits (160), Expect(2) = e-129
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVH CVAAGGKVLIPTFALGRAQELC
Sbjct: 216 EREFLKAVHNCVAAGGKVLIPTFALGRAQELC 247
>ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
gi|462422065|gb|EMJ26328.1| hypothetical protein
PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 411 bits (1057), Expect(2) = e-125
Identities = 218/384 (56%), Positives = 270/384 (70%), Gaps = 37/384 (9%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LL+DYWER NLKVPIYFSAGLT+QAN+YYK+LI+WTSQKVK+ ++ NAFDFKN FD
Sbjct: 252 ILLEDYWERMNLKVPIYFSAGLTLQANMYYKMLISWTSQKVKETYSTRNAFDFKNAHKFD 311
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RS+INAPGPCVLFATPGMISGGFSLEVFK WAP E NLVTLPGYC+AGTIGHKLMS K P
Sbjct: 312 RSMINAPGPCVLFATPGMISGGFSLEVFKHWAPSEMNLVTLPGYCVAGTIGHKLMSGK-P 370
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+D +IDVRCQIH LSFSPHTDAKGIMDL+KFLSPK+VILVHGEKPKM LK +I
Sbjct: 371 TKIDLDKDTQIDVRCQIHHLSFSPHTDAKGIMDLIKFLSPKNVILVHGEKPKMATLKGKI 430
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSR--------TDASRP 353
QSEL I+C PANNETV I S+HY++A ASDAF++SC +PN KFS+ +++
Sbjct: 431 QSELGIQCHDPANNETVSISSTHYVKALASDAFIRSCSNPNFKFSKSSQEDEHGSNSRNN 490
Query: 352 DTPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEMRV----ENHQVKFVHCC------ 203
+ P L+V D+RVA+G+L ++ + K VV DE+ + + HQV+F +CC
Sbjct: 491 NFTPRLRVSDERVAEGVLVMERNKKAK---VVHQDELLLMLGEKKHQVQFAYCCPADIGH 547
Query: 202 ------SATHSDSLSEKDT---LLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSR 50
S T+ L + +T LL L KL +F + D + +QV SF S+C +
Sbjct: 548 LGETKSSTTNDGQLCKSETCSRLLRQLSAKLSNEFSQGNIQDFEDHLQV-ESFHVSICLK 606
Query: 49 EECRI----------DAQHFCCTW 8
C +A FCC+W
Sbjct: 607 NNCPYRLMDVQNKSQEAAFFCCSW 630
Score = 65.5 bits (158), Expect(2) = e-125
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFL+AVHKCVA GGKVLIPTFALGRAQELC
Sbjct: 220 EREFLRAVHKCVAGGGKVLIPTFALGRAQELC 251
>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 404 bits (1037), Expect(2) = e-123
Identities = 215/369 (58%), Positives = 268/369 (72%), Gaps = 21/369 (5%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLD+YWER NLKVPIYFSAGLTIQAN+YYK+LI+WT+Q+VK+ +A HNAFDFKNV SFD
Sbjct: 304 ILLDNYWERMNLKVPIYFSAGLTIQANMYYKMLISWTNQRVKETYATHNAFDFKNVRSFD 363
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLINAPGPCVLFATPGMISGGFSLEVFK WAP E NLVTLPGYCLAGTIGHKL + K P
Sbjct: 364 RSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGK-P 422
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+D++I VRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM +LK +I
Sbjct: 423 TKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKGKI 482
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRT--------DASRP 353
+S+L I+C YPANN+TV IPS+ +++A S F++S L+PN KF +T +
Sbjct: 483 ESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKFVKTISEDKSNLVSKET 542
Query: 352 DTPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEMRV----ENHQVKFVHCCSATHSD 185
+ +LQV+D+RVA+G+L ++ K VV +E+ + + H V+F +CC +
Sbjct: 543 EATSVLQVHDERVAEGILIVEKSKKAK---VVHQNELLLMIGKDKHDVQFAYCC--PNVV 597
Query: 184 SLSEKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREEC---------RID 32
S S++ + LHLL+ KL I D +QV S S+C ++ C +
Sbjct: 598 STSDECSWLHLLFAKLATKLGGNI-QDFGQHLQV-DSIHISVCLKDICPYRTTDGPQKEP 655
Query: 31 AQHFCCTWS 5
A FCCTWS
Sbjct: 656 AVFFCCTWS 664
Score = 65.9 bits (159), Expect(2) = e-123
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVHKCVA GGKVLIPTFALGRAQELC
Sbjct: 272 EREFLKAVHKCVADGGKVLIPTFALGRAQELC 303
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 405 bits (1042), Expect(2) = e-122
Identities = 213/376 (56%), Positives = 261/376 (69%), Gaps = 29/376 (7%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LL+DYWER NLKVPIYFS LT QAN+YY +LI+WTSQK+K+ H+ HNAFDFKNV F+
Sbjct: 244 ILLEDYWERMNLKVPIYFSTALTRQANMYYMMLISWTSQKIKETHSTHNAFDFKNVHKFE 303
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RS+I+APGPCVLFA PGMISGGFSLEVFK WAP E+NLV +PGYC+AGTIGHKLMS K P
Sbjct: 304 RSMIDAPGPCVLFAGPGMISGGFSLEVFKHWAPSEKNLVIMPGYCVAGTIGHKLMSGK-P 362
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+D +IDVRCQIHQL+FSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM LK RI
Sbjct: 363 TKIDLDKDTRIDVRCQIHQLAFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMATLKGRI 422
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTD------ASRPDT 347
++EL I+C YPA NETV IPS+HY A SDAF+QSC SPN KFS + +S +
Sbjct: 423 ETELGIQCYYPAINETVSIPSTHYATAVTSDAFVQSCSSPNFKFSTSSSEHSQGSSNSKS 482
Query: 346 PPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEMRV----ENHQVKFVHCCSATHSDS- 182
P L+V DDRVA+G+L ++ + K VV DE+ + + HQVKF +CC A +S
Sbjct: 483 IPRLRVSDDRVAEGILVMEKNKKAK---VVHQDELPLMLGEKKHQVKFAYCCPAHIGNSQ 539
Query: 181 -------LSEKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREEC------ 41
S + LL L KL + + + +Q+ S S+CS +C
Sbjct: 540 ENTSLPLSSTNNDLLQLFSAKLANELSEGNIQHFGDHLQL-ESIHVSICSNNDCPYRLSD 598
Query: 40 -----RIDAQHFCCTW 8
+ + FCC+W
Sbjct: 599 NGAEEQREPVFFCCSW 614
Score = 62.8 bits (151), Expect(2) = e-122
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVH CVA GGKVLIP+FALGRAQELC
Sbjct: 212 EREFLKAVHTCVAGGGKVLIPSFALGRAQELC 243
>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
gi|550329586|gb|EEF00952.2| metallo-beta-lactamase family
protein [Populus trichocarpa]
Length = 625
Score = 401 bits (1031), Expect(2) = e-122
Identities = 220/381 (57%), Positives = 270/381 (70%), Gaps = 35/381 (9%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLDDYWER NLKVPIYFSAGLTIQANLYYKILI+WTSQKVK+ +A NAFDFK+V +FD
Sbjct: 249 ILLDDYWERMNLKVPIYFSAGLTIQANLYYKILISWTSQKVKETYATRNAFDFKHVHNFD 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLINAPGPCVLFATPGMISGGFSLEVFKQWAP E NL+TLPGYC+AGT+GHKLMS K P
Sbjct: 309 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLITLPGYCVAGTVGHKLMSGK-P 367
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+D +IDVRCQIHQLSFSPHTD+KGIMDL KFLSP++VILVHGEKPKM +LKERI
Sbjct: 368 TKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDLTKFLSPRNVILVHGEKPKMVSLKERI 427
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKF---SRTDAS------- 359
Q+EL I C PAN + V IPS+ Y++A AS+ F++SCL+PN +F S+ D S
Sbjct: 428 QTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNFRFLKRSKEDNSDQVLRNT 487
Query: 358 RPDTPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDE----MRVENHQVKFVHCCSATH 191
P P LQV D+RVA+G+L ++ K VV D+ +R + H V+F +CC+A
Sbjct: 488 NPTAP--LQVNDERVAEGILIMEKGKKAR---VVHQDDLLLMLRQKKHDVQFAYCCAAQL 542
Query: 190 SD-----------SLSEKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREE 44
+ LS+K + L LL+ +L F + D +QV SF S+C ++
Sbjct: 543 DNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLGEHLQV-ESFHVSVCLKDN 601
Query: 43 CR---ID-------AQHFCCT 11
C ID +FCC+
Sbjct: 602 CPYRIIDNSQKEAVTVYFCCS 622
Score = 65.1 bits (157), Expect(2) = e-122
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVH+CVA GGKVLIPTFALGRAQELC
Sbjct: 217 EREFLKAVHECVAGGGKVLIPTFALGRAQELC 248
>ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
gi|550329587|gb|ERP56231.1| hypothetical protein
POPTR_0010s11650g [Populus trichocarpa]
Length = 464
Score = 401 bits (1031), Expect(2) = e-122
Identities = 220/381 (57%), Positives = 270/381 (70%), Gaps = 35/381 (9%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLDDYWER NLKVPIYFSAGLTIQANLYYKILI+WTSQKVK+ +A NAFDFK+V +FD
Sbjct: 88 ILLDDYWERMNLKVPIYFSAGLTIQANLYYKILISWTSQKVKETYATRNAFDFKHVHNFD 147
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLINAPGPCVLFATPGMISGGFSLEVFKQWAP E NL+TLPGYC+AGT+GHKLMS K P
Sbjct: 148 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLITLPGYCVAGTVGHKLMSGK-P 206
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+D +IDVRCQIHQLSFSPHTD+KGIMDL KFLSP++VILVHGEKPKM +LKERI
Sbjct: 207 TKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDLTKFLSPRNVILVHGEKPKMVSLKERI 266
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKF---SRTDAS------- 359
Q+EL I C PAN + V IPS+ Y++A AS+ F++SCL+PN +F S+ D S
Sbjct: 267 QTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNFRFLKRSKEDNSDQVLRNT 326
Query: 358 RPDTPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDE----MRVENHQVKFVHCCSATH 191
P P LQV D+RVA+G+L ++ K VV D+ +R + H V+F +CC+A
Sbjct: 327 NPTAP--LQVNDERVAEGILIMEKGKKAR---VVHQDDLLLMLRQKKHDVQFAYCCAAQL 381
Query: 190 SD-----------SLSEKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREE 44
+ LS+K + L LL+ +L F + D +QV SF S+C ++
Sbjct: 382 DNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLGEHLQV-ESFHVSVCLKDN 440
Query: 43 CR---ID-------AQHFCCT 11
C ID +FCC+
Sbjct: 441 CPYRIIDNSQKEAVTVYFCCS 461
Score = 65.1 bits (157), Expect(2) = e-122
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVH+CVA GGKVLIPTFALGRAQELC
Sbjct: 56 EREFLKAVHECVAGGGKVLIPTFALGRAQELC 87
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 399 bits (1026), Expect(2) = e-120
Identities = 199/293 (67%), Positives = 236/293 (80%), Gaps = 11/293 (3%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
MLLDDYWER NLKVPIYFSAGLTIQAN+YYK+LINW SQKVK+ A NAFDFKNV SF+
Sbjct: 249 MLLDDYWERMNLKVPIYFSAGLTIQANMYYKVLINWASQKVKNLSATRNAFDFKNVHSFE 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RS+INAPGPCVLFATPGM+SGGFSLEVFKQWAPYE+NL+ LPGYCLA T+GHKLM AK P
Sbjct: 309 RSMINAPGPCVLFATPGMLSGGFSLEVFKQWAPYEQNLIALPGYCLAETVGHKLMRAKPP 368
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
+I +D+ +IDVRCQIHQLSFSPHTD+KGIMDL++FLSPK+VILVHGEKPKM +LKERI
Sbjct: 369 ARIDVDKSTQIDVRCQIHQLSFSPHTDSKGIMDLIRFLSPKNVILVHGEKPKMASLKERI 428
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPDTPPLL-- 335
+S+L I C YPANNE+ I S+ YI+A AS +FLQS LSPN KF +T SR DT +L
Sbjct: 429 ESDLRIPCYYPANNESQCIESTQYIKAEASKSFLQSSLSPNFKFLKT-ISRADTGFILNE 487
Query: 334 ------QVYDDRVAQGLLTLQPDNKEHPRVV---VTLDEMRVENHQVKFVHCC 203
QV DDRVA+G + +Q D +HP++V +D + ENH+V+ +CC
Sbjct: 488 RAESCIQVCDDRVAEGAVIMQKD--QHPKIVHQNELMDILEAENHKVQVAYCC 538
Score = 60.8 bits (146), Expect(2) = e-120
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFL+A+HKCV +GGKVLIP FALGRAQELC
Sbjct: 217 EREFLEAIHKCVDSGGKVLIPAFALGRAQELC 248
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 394 bits (1011), Expect(2) = e-119
Identities = 205/320 (64%), Positives = 245/320 (76%), Gaps = 21/320 (6%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLDDYWER NLKVPIYFSAGLTIQAN+YYK+LI WTSQK+K+ + NAFDFKNV +FD
Sbjct: 249 LLLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIGWTSQKIKETYTSRNAFDFKNVYTFD 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSL++APGPCVLFATPGMISGGFSLEVFK+WAP E NLVTLPGYC+AGTIGHKLMS K P
Sbjct: 309 RSLLDAPGPCVLFATPGMISGGFSLEVFKRWAPCEMNLVTLPGYCVAGTIGHKLMSGK-P 367
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
++I LD+D +IDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM +LKERI
Sbjct: 368 SKINLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKERI 427
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPDTPPL--- 338
QSEL I+C PAN ET+ IPS+ +++A AS+AF++SCLSPN +F + S DT L
Sbjct: 428 QSELEIQCYVPANCETLCIPSTLFVKADASEAFIRSCLSPNFRF--LNKSLKDTSDLVLH 485
Query: 337 -------LQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEMRV----ENHQVKFVHCC---- 203
L+V D+RVA+G+L ++ + K VV DE+ + + H+V+F +CC
Sbjct: 486 STNATSRLEVSDERVAEGILVVEKNKKAR---VVHQDELLLMLGAKQHEVQFAYCCPVQV 542
Query: 202 ---SATHSDSLSEKDTLLHL 152
T D S D LL L
Sbjct: 543 DNMDQTRRDPSSTHDELLTL 562
Score = 65.1 bits (157), Expect(2) = e-119
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLK VHKCVA GGKVLIPTFALGRAQELC
Sbjct: 217 EREFLKVVHKCVAGGGKVLIPTFALGRAQELC 248
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 388 bits (996), Expect(2) = e-118
Identities = 206/358 (57%), Positives = 257/358 (71%), Gaps = 28/358 (7%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLD+YWER NLKVPIYFSAGLTIQAN+YYK+LI+WT+Q+VK+ +A HNAFDFKNV SFD
Sbjct: 1498 ILLDNYWERMNLKVPIYFSAGLTIQANMYYKMLISWTNQRVKETYATHNAFDFKNVRSFD 1557
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLINAPGPCVLFATPGMISGGFSLEVFK WAP E NLVTLPGYCLAGTIGHKL + K P
Sbjct: 1558 RSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGK-P 1616
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+D++I VRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM +LK +I
Sbjct: 1617 TKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKGKI 1676
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRT--------DASRP 353
+S+L I+C YPANN+TV IPS+ +++A S F++S L+PN KF +T +
Sbjct: 1677 ESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKFVKTISEDKSNLVSKET 1736
Query: 352 DTPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEMRV----ENHQVKFVHCCSATHSD 185
+ +LQV+D+RVA+G+L ++ K VV +E+ + + H V+F +CC +
Sbjct: 1737 EATSVLQVHDERVAEGILIVEKSKKAK---VVHQNELLLMIGKDKHDVQFAYCCPVQIGN 1793
Query: 184 ----------------SLSEKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASL 59
S S++ + LHLL+ KL I D +QV S +S+
Sbjct: 1794 LERTKGMDFALSKNVVSTSDECSWLHLLFAKLATKLGGNI-QDFGQHLQVDSIHISSI 1850
Score = 65.9 bits (159), Expect(2) = e-118
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVHKCVA GGKVLIPTFALGRAQELC
Sbjct: 1466 EREFLKAVHKCVADGGKVLIPTFALGRAQELC 1497
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 387 bits (994), Expect(2) = e-117
Identities = 211/388 (54%), Positives = 265/388 (68%), Gaps = 39/388 (10%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLDDYWER NL+VPIYFSAGLTIQAN+YYK+LI+WTSQKVK+ + NAFDFKNV +FD
Sbjct: 249 ILLDDYWERMNLRVPIYFSAGLTIQANMYYKMLISWTSQKVKETY---NAFDFKNVHNFD 305
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLI+APGPCVLFATPGM++GGFSLEVFK WAP E NL+TLPGYCLAGTIG+KLMS
Sbjct: 306 RSLIDAPGPCVLFATPGMLTGGFSLEVFKHWAPSEMNLITLPGYCLAGTIGNKLMSGNPT 365
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
++ E KIDVRCQIHQL+FSPHTD KGIMDLVKFLSP+HVILVHGEKPKM LKERI
Sbjct: 366 IEL---EGTKIDVRCQIHQLAFSPHTDGKGIMDLVKFLSPQHVILVHGEKPKMATLKERI 422
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPD------- 350
QSEL I+C PANNE++ IPS+HY++A ASDAF++SC++PN ++ ++ +
Sbjct: 423 QSELGIKCYDPANNESMCIPSTHYVKAGASDAFIRSCMNPNFQYLKSGSEEKSVSGSKCT 482
Query: 349 --TPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEMRV----ENHQVKFVHCCSATHS 188
T P L + D+RVA+G+L L+ K VV DE+ + + H+V+F +CC
Sbjct: 483 EGTLP-LWIKDERVAEGILVLEKSEKAK---VVHQDELLLMLGEKRHEVQFAYCCPVNVD 538
Query: 187 D-------SLS---------EKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLC 56
+ SL+ K +L+ LL KL R + + D +QV SF S+C
Sbjct: 539 ELEKFTTTSLTPTARMLRDPNKSSLIRLLVAKLSRKLSEGNIQDFGEHLQV-ESFHLSVC 597
Query: 55 SREEC----------RIDAQHFCCTWSA 2
++ C + FCCTWSA
Sbjct: 598 LKDTCPYRITNGLEDKPRTAFFCCTWSA 625
Score = 64.7 bits (156), Expect(2) = e-117
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVHKCVA GGKVLIP FALGRAQELC
Sbjct: 217 EREFLKAVHKCVAGGGKVLIPAFALGRAQELC 248
>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
gi|557550770|gb|ESR61399.1| hypothetical protein
CICLE_v10014563mg [Citrus clementina]
Length = 646
Score = 385 bits (990), Expect(2) = e-117
Identities = 211/388 (54%), Positives = 264/388 (68%), Gaps = 39/388 (10%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLDDYWER NL+VPIYFSAGLTIQAN+YYK+LI+WTSQKVK+ + NAFDFKNV +FD
Sbjct: 249 ILLDDYWERMNLRVPIYFSAGLTIQANMYYKMLISWTSQKVKETY---NAFDFKNVHNFD 305
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLI+APGPCVLFATPGM++GGFSLEVFK WAP E NL+TLPGYCLAGTIG+KLMS
Sbjct: 306 RSLIDAPGPCVLFATPGMLTGGFSLEVFKHWAPSEMNLITLPGYCLAGTIGNKLMSGNPT 365
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
++ E KIDVRCQIHQL+FSPHTD KGIMDLVKFLSP+HVILVHGEKPKM LKERI
Sbjct: 366 IEL---EGTKIDVRCQIHQLAFSPHTDGKGIMDLVKFLSPQHVILVHGEKPKMATLKERI 422
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPD------- 350
QSEL I+C PANNE++ IPS+HY++A ASDAF++SC++PN +F ++ +
Sbjct: 423 QSELGIKCYDPANNESMCIPSTHYVKAGASDAFIRSCMNPNFQFLKSGSEEKSVSGSKCT 482
Query: 349 --TPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEMRV----ENHQVKFVHCCSATHS 188
T P L + D+RVA+G+L L+ K VV DE+ + + H+V+F +CC
Sbjct: 483 EGTLP-LWIKDERVAEGILVLEKSEKAK---VVHQDELLLMLGEKRHEVQFAYCCPVNVD 538
Query: 187 D-------SLS---------EKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLC 56
+ SL+ K +L+ LL KL R + + D +QV SF S+C
Sbjct: 539 ELEKFTTTSLTPTARMLRDPNKSSLIRLLVAKLSRKLSEGNIQDFGEHLQV-ESFHLSVC 597
Query: 55 SREEC----------RIDAQHFCCTWSA 2
++ C + CCTWSA
Sbjct: 598 LKDTCPYRITNGLEDKPRTAFVCCTWSA 625
Score = 64.7 bits (156), Expect(2) = e-117
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVHKCVA GGKVLIP FALGRAQELC
Sbjct: 217 EREFLKAVHKCVAGGGKVLIPAFALGRAQELC 248
>ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Cicer arietinum]
Length = 532
Score = 377 bits (967), Expect(2) = e-115
Identities = 188/277 (67%), Positives = 219/277 (79%), Gaps = 8/277 (2%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLDDYWER NLKVPIYFSAGLTIQAN+YYK+LI WTSQK+KD ++ HNAFDFKNV F+
Sbjct: 249 ILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIGWTSQKIKDTYSTHNAFDFKNVHKFE 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RS+I+A GPCVLFATPGMISGGFSLEVFK WAP E NLVTLPGYC+AGT+GHKL S K P
Sbjct: 309 RSMIDATGPCVLFATPGMISGGFSLEVFKHWAPSENNLVTLPGYCVAGTVGHKLTSGK-P 367
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I D D +IDVRCQIHQL+FSPHTD+KGIMDLVKFLSPKHVILVHGEKPKM +LKERI
Sbjct: 368 TKINTDPDTQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMASLKERI 427
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKF---SRTDASR-----P 353
SEL I+C PANNETV IPS+ Y+ A AS F+++CL+PN +F S D S
Sbjct: 428 HSELGIQCYNPANNETVCIPSTQYVNAEASGTFIRNCLNPNFQFQKCSSEDTSNSTMIDK 487
Query: 352 DTPPLLQVYDDRVAQGLLTLQPDNKEHPRVVVTLDEM 242
+ P LQV D+RVA G+L ++ K +V DE+
Sbjct: 488 NLTPKLQVEDERVADGVLVMEKSKKAK---IVNRDEL 521
Score = 65.5 bits (158), Expect(2) = e-115
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVHKCV+ GGKVLIPTFALGRAQELC
Sbjct: 217 EREFLKAVHKCVSGGGKVLIPTFALGRAQELC 248
>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Cucumis sativus]
Length = 649
Score = 378 bits (970), Expect(2) = e-114
Identities = 210/379 (55%), Positives = 254/379 (67%), Gaps = 34/379 (8%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLDDYWER NLK PIY SAGLT+QAN+YYK+LI+WTSQKVK+ + NAFDFKNV FD
Sbjct: 249 VLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFD 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RS+I+APGPCVLFATPGMIS GFSLEVFK+WAP + NL+TLPGYC+AGT+GHKLMS K P
Sbjct: 309 RSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGK-P 367
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+ +IDV+CQ+HQL+FSPHTD+KGIMDLVKFLSPKHVILVHGEKPKM LKERI
Sbjct: 368 TKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERI 427
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPDTPPL--- 338
SEL I C PANNETV I S+ ++A AS F+QSC +PN KF + + PD L
Sbjct: 428 HSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYK 487
Query: 337 ----------LQVYDDRVAQGLLTLQPDNKE---HPRVVVTLDEMRVENHQVKFVHC--- 206
LQV DDRV +G+L ++ K H ++ L + + H+V+F HC
Sbjct: 488 AERTSNMLIPLQVSDDRVNEGILVMENGKKTKALHQDELLLL--LGQQEHEVRFAHCRPI 545
Query: 205 ----CSATH-SDSLSEKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREEC 41
H DSLS K L L KL + D + + +QV S S+CS+E C
Sbjct: 546 YFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQV-ESITLSICSKENC 604
Query: 40 ---RID-------AQHFCC 14
ID A FCC
Sbjct: 605 PYRTIDRIKNESTAMVFCC 623
Score = 63.9 bits (154), Expect(2) = e-114
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVH C+A+GGKVLIPTFALGRAQELC
Sbjct: 217 EREFLKAVHNCLASGGKVLIPTFALGRAQELC 248
>ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like, partial [Cucumis
sativus]
Length = 472
Score = 375 bits (962), Expect(2) = e-113
Identities = 207/366 (56%), Positives = 249/366 (68%), Gaps = 21/366 (5%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LLDDYWER NLK PIY SAGLT+QAN+YYK+LI+WTSQKVK+ + NAFDFKNV FD
Sbjct: 93 VLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFD 152
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RS+I+APGPCVLFATPGMIS GFSLEVFK+WAP + NL+TLPGYC+AGT+GHKLMS K P
Sbjct: 153 RSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGK-P 211
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T+I LD+ +IDV+CQ+HQL+FSPHTD+KGIMDLVKFLSPKHVILVHGEKPKM LKERI
Sbjct: 212 TKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERI 271
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPDTPPLLQV 329
SEL I C PANNETV I S+ ++A AS F+QSC +PN S P LQV
Sbjct: 272 HSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFNLS--------CGPALQV 323
Query: 328 YDDRVAQGLLTLQPDNKE---HPRVVVTLDEMRVENHQVKFVHC-------CSATH-SDS 182
DDRV +G+L ++ K H ++ L + + H+V+F HC H DS
Sbjct: 324 SDDRVNEGILVMENGKKXKALHQDELLLL--LGQQEHEVRFAHCRPIYFGSLDEIHVMDS 381
Query: 181 LSEKDTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREEC---RID------- 32
LS K L L KL + D + + +QV S S+CS+E C ID
Sbjct: 382 LSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQV-ESITLSICSKENCPYRTIDRIKNEST 440
Query: 31 AQHFCC 14
A FCC
Sbjct: 441 AMVFCC 446
Score = 63.9 bits (154), Expect(2) = e-113
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVH C+A+GGKVLIPTFALGRAQELC
Sbjct: 61 EREFLKAVHNCLASGGKVLIPTFALGRAQELC 92
>ref|NP_178282.2| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
gi|332278175|sp|Q8GUU3.2|CPS3B_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 3-II; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit II; Short=AtCPSF73-II;
Short=CPSF 73 kDa subunit II; AltName: Full=Protein
EMBRYO SAC DEVELOPMENT ARREST 26
gi|62320470|dbj|BAD94982.1| putative cleavage and
polyadenylation specifity factor [Arabidopsis thaliana]
gi|330250395|gb|AEC05489.1| cleavage and polyadenylation
specificity factor subunit 3-II [Arabidopsis thaliana]
Length = 613
Score = 372 bits (954), Expect(2) = e-112
Identities = 195/360 (54%), Positives = 240/360 (66%), Gaps = 12/360 (3%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
MLLDDYWER N+KVPIYFS+GLTIQAN+YYK+LI+WTSQ VK+ H HN FDFKNV FD
Sbjct: 249 MLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFDFKNVKDFD 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLI+APGPCVLFATPGM+ GFSLEVFK WAP NLV LPGY +AGT+GHKLM+ K P
Sbjct: 309 RSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGK-P 367
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T + L K+DVRC++HQ++FSPHTDAKGIMDL KFLSPK+V+LVHGEKP M LKE+I
Sbjct: 368 TTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSMMILKEKI 427
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPDTPPLLQV 329
SEL I C PAN ETV S+ YI+A ASD FL+SC +PN KFS + L+V
Sbjct: 428 TSELDIPCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKFSNSTQ--------LRV 479
Query: 328 YDDRVAQGLLTLQPDNKEHPRVVVTLDE----MRVENHQVKFVHCCSATHSDSLSEKDT- 164
D R A G+L ++ K +V DE + +NH V HCC + D
Sbjct: 480 TDHRTADGVLVIEKSKKAK---IVHQDEISEVLHEKNHVVSLAHCCPVKVKGESEDDDVD 536
Query: 163 LLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREEC-------RIDAQHFCCTWS 5
L+ L K+L+ +H+ + +QV +SF SLC +++C +A CC WS
Sbjct: 537 LIKQLSAKILKTVSGAQIHESENCLQV-ASFKGSLCLKDKCMHRSSSSSSEAVFLCCNWS 595
Score = 62.0 bits (149), Expect(2) = e-112
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFL+AVHKCVA GGK LIP+FALGRAQELC
Sbjct: 217 EREFLQAVHKCVAGGGKALIPSFALGRAQELC 248
>ref|XP_007153236.1| hypothetical protein PHAVU_003G018200g [Phaseolus vulgaris]
gi|561026590|gb|ESW25230.1| hypothetical protein
PHAVU_003G018200g [Phaseolus vulgaris]
Length = 537
Score = 368 bits (944), Expect(2) = e-112
Identities = 178/265 (67%), Positives = 215/265 (81%), Gaps = 8/265 (3%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
+LL+DYWER NLKVPIYFSAGLTIQAN YYK+LI+WTSQK+KD +++HNAFDFKNV F+
Sbjct: 249 ILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLISWTSQKIKDTYSKHNAFDFKNVQKFE 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
+S+I+APGPCVLFATPGMISGGFSLEVFK WA E NLVTLPGYC+AGTIGHKLMS K
Sbjct: 309 KSMIDAPGPCVLFATPGMISGGFSLEVFKHWAVSENNLVTLPGYCVAGTIGHKLMSDK-R 367
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
++ LD + +IDVRCQ+HQL+FSPHTD+KGIMDLV FL+PKHVILVHGEK KM +LKE+I
Sbjct: 368 GKVDLDANTRIDVRCQVHQLAFSPHTDSKGIMDLVNFLAPKHVILVHGEKHKMASLKEKI 427
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSR---TDASRPDTP-- 344
SE I+C PANNET+ IPS+HY+ A ASD F++SCLSPN F + D TP
Sbjct: 428 HSEFGIQCYDPANNETICIPSTHYVNAEASDTFIRSCLSPNFTFQKCNSADIYNSTTPDK 487
Query: 343 ---PLLQVYDDRVAQGLLTLQPDNK 278
P+LQV D+RV++G+L ++ K
Sbjct: 488 NLMPMLQVEDERVSEGVLVVEKGKK 512
Score = 65.5 bits (158), Expect(2) = e-112
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFLKAVHKCV+ GGKVLIPTFALGRAQELC
Sbjct: 217 EREFLKAVHKCVSCGGKVLIPTFALGRAQELC 248
>ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutrema salsugineum]
gi|557092497|gb|ESQ33144.1| hypothetical protein
EUTSA_v10005303mg [Eutrema salsugineum]
Length = 617
Score = 370 bits (951), Expect(2) = e-112
Identities = 197/364 (54%), Positives = 243/364 (66%), Gaps = 16/364 (4%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
MLLDDYWER N+KVPIYFS+GLTIQAN+YYK+LI+WTSQ VK+ HA HN FDFKNV FD
Sbjct: 249 MLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHATHNPFDFKNVKDFD 308
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLI+APGPCVLFATPGM+ GFSLEVFK WAP NLV LPGY +AGT+GHKLMS K P
Sbjct: 309 RSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMSGK-P 367
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T + L K+DVRC+IHQ++FSPHTDAKGIMDL KFLSPK+V+LVHGEKP M +LK++I
Sbjct: 368 TTVDLYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSMMSLKDKI 427
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPDTPPLLQV 329
SEL + C PAN ETV + S+ +I+A ASD FL+SC SPN +FS + L+V
Sbjct: 428 TSELDVPCFVPANGETVSVSSTTFIKANASDMFLKSCSSPNFRFSNSSTE-------LRV 480
Query: 328 YDDRVAQGLLTLQPDNKEHPRVVVTLDE----MRVENHQVKFVHCCSA---THSDSLSEK 170
D R A G+L ++ K +V LDE + +NH V CC SD + +
Sbjct: 481 TDQRTADGVLVIEKSKKAK---IVHLDEVSEVLHEKNHVVSLACCCPVKVKKESDDV-DV 536
Query: 169 DTLLHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREEC---------RIDAQHFC 17
D ++ L K+ +H+ +QVG SF SLC +E+C +A C
Sbjct: 537 DLIIKQLSEKISEKVSGAEIHETGNCLQVG-SFKGSLCLKEKCAHRREISSSSSEAVFLC 595
Query: 16 CTWS 5
C WS
Sbjct: 596 CNWS 599
Score = 62.0 bits (149), Expect(2) = e-112
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFL+AVHKCVA GGK LIP+FALGRAQELC
Sbjct: 217 EREFLQAVHKCVAGGGKALIPSFALGRAQELC 248
>ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Capsella rubella]
gi|482559548|gb|EOA23739.1| hypothetical protein
CARUB_v10016952mg [Capsella rubella]
Length = 555
Score = 368 bits (945), Expect(2) = e-111
Identities = 192/360 (53%), Positives = 237/360 (65%), Gaps = 12/360 (3%)
Frame = -2
Query: 1048 MLLDDYWERTNLKVPIYFSAGLTIQANLYYKILINWTSQKVKDAHARHNAFDFKNVISFD 869
MLLDDYWER N+KVPIYFS+GLTIQAN+YYK+LI+WTSQ VK+ H HN FDFKNV FD
Sbjct: 191 MLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFDFKNVKDFD 250
Query: 868 RSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEENLVTLPGYCLAGTIGHKLMSAKLP 689
RSLI+APGPCVLFATPGM+ GFSLEVFK WAP NLV LPGY +AGT+GHKLM+ K P
Sbjct: 251 RSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGK-P 309
Query: 688 TQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMGALKERI 509
T + L K+DVRC+IHQ++FSPHTDAKGIMDL KFLSPK+V+LVHGEKP M LKE+I
Sbjct: 310 TTVDLYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSMMTLKEKI 369
Query: 508 QSELSIECLYPANNETVRIPSSHYIEAAASDAFLQSCLSPNIKFSRTDASRPDTPPLLQV 329
SEL I C PAN ETV + S+ +++A ASD FL+SC SPN KFS + L+V
Sbjct: 370 TSELDIPCFVPANGETVSVASTTFVKAKASDMFLKSCSSPNFKFSNSSQ--------LRV 421
Query: 328 YDDRVAQGLLTLQPDNKEHPRVVVTLDE----MRVENHQVKFVHCCSATHSDSLSEKDTL 161
D R A G+L ++ K +V DE + +NH V +CC L
Sbjct: 422 TDQRTADGVLVIEKSKKAK---IVHQDEVSEVLHEKNHVVCLAYCCPVKAKGESDNDVDL 478
Query: 160 LHLLYGKLLRDFPDCIMHDCQTRVQVGSSFFASLCSREECR--------IDAQHFCCTWS 5
+ L K+ +H+ + +QVG SF ++C +E+C +A CC WS
Sbjct: 479 IKQLSTKISEIMSGAQIHEAENSLQVG-SFKGAVCLKEKCMHRTEIISCSEAVFLCCNWS 537
Score = 62.0 bits (149), Expect(2) = e-111
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -3
Query: 1140 EREFLKAVHKCVAAGGKVLIPTFALGRAQELC 1045
EREFL+AVHKCVA GGK LIP+FALGRAQELC
Sbjct: 159 EREFLQAVHKCVAGGGKALIPSFALGRAQELC 190