BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00036396
         (709 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus...   276   5e-72
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   256   7e-66
gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlise...   244   3e-62
ref|XP_002312652.1| RNA recognition motif-containing family prot...   237   3e-60
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   231   2e-58
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   229   7e-58
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   228   2e-57
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   228   2e-57
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   228   2e-57
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   228   2e-57
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   228   2e-57
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   228   2e-57
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   228   2e-57
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   227   3e-57
ref|XP_002315647.1| RNA recognition motif-containing family prot...   227   3e-57
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun...   226   4e-57
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   226   4e-57
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   225   1e-56
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   224   2e-56
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   224   2e-56

>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
          Length = 639

 Score =  276 bits (706), Expect = 5e-72
 Identities = 143/220 (65%), Positives = 151/220 (68%), Gaps = 6/220 (2%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEFYDP+AA+ACK+GM G+ FNGRACVV +A P T KQMG
Sbjct: 257 VKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNGRACVVTYANPQTSKQMG 316

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQ--PPYKPG 356
           ASY NKN          RNP+ND AGRGNG NYPSGDA                P   PG
Sbjct: 317 ASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSGDAGRNFGRGGGWGRGNQAPNRGPG 375

Query: 357 SGPVRGRGGMMNKNMTXXXXXXXXXXXXXXXX----FHAPPVMMPHQGMMGPGFDLAFMG 524
           +GP+RGRGGM NKNM                     F  PP MM  QGMMGPGFDLAFMG
Sbjct: 376 AGPIRGRGGMGNKNMIGNAPGAGGGGAYGQGLNGPGFGGPPGMMHPQGMMGPGFDLAFMG 435

Query: 525 RGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           RG GYG FSGP FQGMLPPF GVNSMGLPGVAPHVNPAFF
Sbjct: 436 RGGGYGGFSGPPFQGMLPPFQGVNSMGLPGVAPHVNPAFF 475


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Solanum tuberosum]
           gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit CG7185-like
           isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  256 bits (653), Expect = 7e-66
 Identities = 134/222 (60%), Positives = 145/222 (65%), Gaps = 8/222 (3%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEF+DP++A+ACKEGMNGYNFNGRACVVAFATP TIKQMG
Sbjct: 257 VKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGRACVVAFATPQTIKQMG 316

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDA--XXXXXXXXXXXXXQPPYKPG 356
           +SY NK           R P+N+  GRG G NY  GDA                P   PG
Sbjct: 317 SSYANKTQNQVQSQPQGRRPMNEGVGRG-GPNYTPGDAGRNFGRGSWGRGGPGMPNRGPG 375

Query: 357 SGPVRGRGGMMNKNM-----TXXXXXXXXXXXXXXXXFHAPPVMMPH-QGMMGPGFDLAF 518
            GPVRGRG M +KNM                      F  PP  + H QGMMGPGFD +F
Sbjct: 376 GGPVRGRGAMGSKNMMVNPGAGNGAGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPSF 435

Query: 519 MGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           MGRGAGYG FSGP F GM+PPF  VN MGLPGVAPHVNPAFF
Sbjct: 436 MGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFF 477


>gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlisea aurea]
          Length = 508

 Score =  244 bits (622), Expect = 3e-62
 Identities = 137/222 (61%), Positives = 145/222 (65%), Gaps = 8/222 (3%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEF+DP+AA ACKEGMNGY FNGRACVVAFATP TIKQMG
Sbjct: 241 VKEIKFFDERASGKSKGYCQVEFFDPAAAHACKEGMNGYVFNGRACVVAFATPQTIKQMG 300

Query: 183 ASYTNKNXXXXXXXXXXRN-PIND-AAGRGNGANYPSGDA----XXXXXXXXXXXXXQPP 344
           ASY N+N          RN  +ND  AGRG G N+  GDA                    
Sbjct: 301 ASYMNRNQGQPQAQFPGRNAAMNDGGAGRGVGTNFSGGDAGRNFGRGAWGGRGGNQSLNS 360

Query: 345 YKPGSGPVRGRGGMMNKNMTXXXXXXXXXXXXXXXXFHAPPVMMPH-QGMMGPGFDLAFM 521
             PGSG VRGRG M NK                   F  PP  M H QGMMGPGFDLAFM
Sbjct: 361 RVPGSGNVRGRGNMGNK---PPNSGGAGGGGNYGPGFGGPPGGMMHPQGMMGPGFDLAFM 417

Query: 522 GRGAGY-GNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           GRGAGY G F+GP F GMLPPFP VN++GLPGVAPHVNPAFF
Sbjct: 418 GRGAGYGGGFTGPAFPGMLPPFPAVNTLGLPGVAPHVNPAFF 459


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  237 bits (604), Expect = 3e-60
 Identities = 127/224 (56%), Positives = 139/224 (62%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMNG+ FNGR CVVAFA+P T+KQMG
Sbjct: 243 VKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQMG 302

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK--PG 356
           ASY NK           R  +ND AGRG  AN+ SGD              Q      PG
Sbjct: 303 ASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGDGGRNYGRGAWGRGGQGILNRGPG 362

Query: 357 SGPVRGRGGMMNKNMT-------XXXXXXXXXXXXXXXXFHAPP-VMMPHQGMMGPGFDL 512
            GP+RGRG M  KNM                        F  P   MMP QGMMG GFD 
Sbjct: 363 GGPMRGRGAMGPKNMAGNVAGVGSGANGGGYGQGLAGPAFGGPAGGMMPPQGMMGAGFDP 422

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +MGRG GYG F+GPGF GMLP FP VNSMGL GVAPHVNPAFF
Sbjct: 423 LYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFF 466


>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|590695488|ref|XP_007044903.1| RNA-binding family
           protein isoform 1 [Theobroma cacao]
           gi|508708837|gb|EOY00734.1| RNA-binding family protein
           isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
           RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  231 bits (589), Expect = 2e-58
 Identities = 125/225 (55%), Positives = 136/225 (60%), Gaps = 11/225 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEFYDP++A+ACKEGM+GY FNGRACVVAFA+P T+KQMG
Sbjct: 257 VKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYMFNGRACVVAFASPQTLKQMG 316

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYKPG-- 356
           ASY NKN          R P ND  GRG   NY SGDA             Q        
Sbjct: 317 ASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSGDAGRNYGRGGWGRGGQGVVNRSGV 375

Query: 357 SGPVRGRGGMMNKNMTXXXXXXXXXXXXXXXXFHAPP---------VMMPHQGMMGPGFD 509
            GP+RGRGG+  KNM                    P           MM  QGMMG GFD
Sbjct: 376 GGPMRGRGGVGVKNMVGSSAGVGNGANGGAAYGQGPAGPPFGGPAGGMMHPQGMMGAGFD 435

Query: 510 LAFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
             +MGRG  YG F GPGF GMLP FP VN++GL GVAPHVNPAFF
Sbjct: 436 PTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFF 480


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
           gi|557540375|gb|ESR51419.1| hypothetical protein
           CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  229 bits (584), Expect = 7e-58
 Identities = 126/227 (55%), Positives = 137/227 (60%), Gaps = 13/227 (5%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNG+ FNGR CVVAFA+P T+KQMG
Sbjct: 259 VKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQTLKQMG 318

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQ--PPYKPG 356
           ASY NKN          R P+ND  GRG   NY SGD              Q  P   PG
Sbjct: 319 ASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGGRNFGRGGWGRGGQGVPNRGPG 378

Query: 357 SGPVRGRGGMMNKNM----------TXXXXXXXXXXXXXXXXFHAPPVMMPH-QGMMGPG 503
            G +RGRG M  KNM                           F  P   M H Q MMG G
Sbjct: 379 GGAMRGRGPMGAKNMMGSSSGAGSGAGPAAGGGYGQGLAGPGFGGPAGGMMHPQNMMG-G 437

Query: 504 FDLAFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           FD  +MGRG GYG FSGPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 438 FDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFF 484


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
           notabilis]
          Length = 636

 Score =  228 bits (581), Expect = 2e-57
 Identities = 125/224 (55%), Positives = 138/224 (61%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVE+YD +AA ACKEGM+G+ FNGRACVVAFA+P T+KQMG
Sbjct: 249 VKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFNGRACVVAFASPQTLKQMG 308

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQ--PPYKPG 356
           A+Y +KN          R PIND  GRG   N+ SGD              Q  P   PG
Sbjct: 309 AAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSGDGGRNFGRGGWGRGGQGAPNRGPG 368

Query: 357 S-GPVRGRGGMMN-KNMTXXXXXXXXXXXXXXXXFHAPPV------MMPHQGMMGPGFDL 512
           S GP+RGRGG M  KNM                    PP       MM  QGMMG GFD 
Sbjct: 369 SGGPMRGRGGAMGAKNMV--GNNAGVGGGGYGQGLAGPPFGGPAGGMMNPQGMMGTGFDP 426

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +MGRG GYG F+GP F GMLP FP VN+MG   VAPHVNPAFF
Sbjct: 427 TYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPHVNPAFF 470


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  228 bits (581), Expect = 2e-57
 Identities = 125/227 (55%), Positives = 137/227 (60%), Gaps = 13/227 (5%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNG+ FNGR CVVAFA+P T+KQMG
Sbjct: 259 VKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQTLKQMG 318

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQ--PPYKPG 356
           ASY NKN          R P+ND  GRG   NY SGD              Q  P   PG
Sbjct: 319 ASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGGRNFGRGGWGRGGQGVPNRGPG 378

Query: 357 SGPVRGRGGMMNKNM----------TXXXXXXXXXXXXXXXXFHAPPVMMPH-QGMMGPG 503
            G +RGRG M  +NM                           F  P   M H Q MMG G
Sbjct: 379 GGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGYGQGLAGPGFGGPAGGMMHPQNMMG-G 437

Query: 504 FDLAFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           FD  +MGRG GYG FSGPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 438 FDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFF 484


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
           gi|508708844|gb|EOY00741.1| RNA-binding family protein
           isoform 6 [Theobroma cacao]
          Length = 602

 Score =  228 bits (580), Expect = 2e-57
 Identities = 124/224 (55%), Positives = 135/224 (60%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           +KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNGY FNGRACVVAFA+P T+KQMG
Sbjct: 257 LKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMG 316

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK--PG 356
           ASY NKN          R P N+  GRG   NY SGDA             Q       G
Sbjct: 317 ASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYGRGGWGRGGQGGVNRAGG 375

Query: 357 SGPVRGRGGMMNKNMTXXXXXXXXXXXXXXXXFHAPPV--------MMPHQGMMGPGFDL 512
            G +RGRGG+  KNM                    P          MM  QGMMG GFD 
Sbjct: 376 GGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDP 435

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +M RG GYG F GPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 TYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFF 479


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
           gi|508708843|gb|EOY00740.1| RNA-binding family protein
           isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  228 bits (580), Expect = 2e-57
 Identities = 124/224 (55%), Positives = 135/224 (60%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           +KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNGY FNGRACVVAFA+P T+KQMG
Sbjct: 257 LKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMG 316

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK--PG 356
           ASY NKN          R P N+  GRG   NY SGDA             Q       G
Sbjct: 317 ASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYGRGGWGRGGQGGVNRAGG 375

Query: 357 SGPVRGRGGMMNKNMTXXXXXXXXXXXXXXXXFHAPPV--------MMPHQGMMGPGFDL 512
            G +RGRGG+  KNM                    P          MM  QGMMG GFD 
Sbjct: 376 GGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDP 435

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +M RG GYG F GPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 TYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFF 479


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
           gi|508708842|gb|EOY00739.1| RNA-binding family protein
           isoform 4 [Theobroma cacao]
          Length = 697

 Score =  228 bits (580), Expect = 2e-57
 Identities = 124/224 (55%), Positives = 135/224 (60%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           +KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNGY FNGRACVVAFA+P T+KQMG
Sbjct: 257 LKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMG 316

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK--PG 356
           ASY NKN          R P N+  GRG   NY SGDA             Q       G
Sbjct: 317 ASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYGRGGWGRGGQGGVNRAGG 375

Query: 357 SGPVRGRGGMMNKNMTXXXXXXXXXXXXXXXXFHAPPV--------MMPHQGMMGPGFDL 512
            G +RGRGG+  KNM                    P          MM  QGMMG GFD 
Sbjct: 376 GGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDP 435

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +M RG GYG F GPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 TYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFF 479


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|590695496|ref|XP_007044905.1| RNA-binding family
           protein isoform 1 [Theobroma cacao]
           gi|590695500|ref|XP_007044906.1| RNA-binding family
           protein isoform 1 [Theobroma cacao]
           gi|508708839|gb|EOY00736.1| RNA-binding family protein
           isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
           RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508708841|gb|EOY00738.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 652

 Score =  228 bits (580), Expect = 2e-57
 Identities = 124/224 (55%), Positives = 135/224 (60%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           +KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNGY FNGRACVVAFA+P T+KQMG
Sbjct: 257 LKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMG 316

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK--PG 356
           ASY NKN          R P N+  GRG   NY SGDA             Q       G
Sbjct: 317 ASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYGRGGWGRGGQGGVNRAGG 375

Query: 357 SGPVRGRGGMMNKNMTXXXXXXXXXXXXXXXXFHAPPV--------MMPHQGMMGPGFDL 512
            G +RGRGG+  KNM                    P          MM  QGMMG GFD 
Sbjct: 376 GGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDP 435

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +M RG GYG F GPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 TYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFF 479


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
           subsp. vesca]
          Length = 646

 Score =  228 bits (580), Expect = 2e-57
 Identities = 123/226 (54%), Positives = 135/226 (59%), Gaps = 12/226 (5%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           +KEIKFFDERASGKSKGYCQV+FYDP+AASACKEGM+GY FNGRACVVAFA+  T+KQMG
Sbjct: 246 IKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFASSQTLKQMG 305

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPY----K 350
            SY NK+          R P+ND AGRG   N+  GD                       
Sbjct: 306 DSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGDTGRNFGRGNNWGRGGQGVLNRGP 365

Query: 351 PGSGPVRGRGGMMNKNMT-------XXXXXXXXXXXXXXXXFHAP-PVMMPHQGMMGPGF 506
            G GP RGRG M  +NM                        F  P   MM   GMMGPGF
Sbjct: 366 GGGGPGRGRGAMGARNMVGNNAGVGTGANGGGYGQGLGGPGFGGPVGGMMNAPGMMGPGF 425

Query: 507 DLAFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           D  +MGRG GYG F GPGF GMLP FPGVN+MGL GVAPHVNPAFF
Sbjct: 426 DPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFF 471


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
           gi|550329195|gb|ERP56065.1| hypothetical protein
           POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  227 bits (579), Expect = 3e-57
 Identities = 124/224 (55%), Positives = 135/224 (60%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMN + FNGR CVVAFA+  T+KQMG
Sbjct: 198 VKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMG 257

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK--PG 356
           ASY +K           R  +ND  GRG  ANY SGD              Q      PG
Sbjct: 258 ASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGDGGRNYGRGGWGRGGQGVLNRGPG 317

Query: 357 SGPVRGRGGMMNKNMT-------XXXXXXXXXXXXXXXXFHAPP-VMMPHQGMMGPGFDL 512
            GP+RGRGGM  KNM                        F  P   MM HQGMMG GFD 
Sbjct: 318 GGPMRGRGGMGPKNMAGNVAGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMGAGFDP 377

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +MGRG GYG F G GF GMLP FP VNSMGL GVAPHVNPAFF
Sbjct: 378 LYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFF 421


>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222864687|gb|EEF01818.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 573

 Score =  227 bits (579), Expect = 3e-57
 Identities = 124/224 (55%), Positives = 135/224 (60%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMN + FNGR CVVAFA+  T+KQMG
Sbjct: 198 VKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMG 257

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK--PG 356
           ASY +K           R  +ND  GRG  ANY SGD              Q      PG
Sbjct: 258 ASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGDGGRNYGRGGWGRGGQGVLNRGPG 317

Query: 357 SGPVRGRGGMMNKNMT-------XXXXXXXXXXXXXXXXFHAPP-VMMPHQGMMGPGFDL 512
            GP+RGRGGM  KNM                        F  P   MM HQGMMG GFD 
Sbjct: 318 GGPMRGRGGMGPKNMAGNVAGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMGAGFDP 377

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +MGRG GYG F G GF GMLP FP VNSMGL GVAPHVNPAFF
Sbjct: 378 LYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFF 421


>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
           gi|462422613|gb|EMJ26876.1| hypothetical protein
           PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  226 bits (577), Expect = 4e-57
 Identities = 123/226 (54%), Positives = 137/226 (60%), Gaps = 12/226 (5%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEF+DP+AA+ACKEGM+GY FNGRACVVAFA+P T+KQMG
Sbjct: 230 VKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVAFASPQTLKQMG 289

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPY----K 350
           ASY +K+          R P+N+  GRG G NY +GD                       
Sbjct: 290 ASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGDTGGRNFGRGGWGRGGQGVANRGP 349

Query: 351 PGSGPVRGRGGMMN-KNMTXXXXXXXXXXXXXXXXFHAPP-------VMMPHQGMMGPGF 506
            G GP+RGRGG M  KNM                   A P        MM  QGMMG GF
Sbjct: 350 GGGGPMRGRGGAMGAKNMAGNPAGVGTGANGGYGQGLAGPGFGGPVGGMMNPQGMMGAGF 409

Query: 507 DLAFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           D  +MGRG GYG F GP F GML  FP VN+MGL GVAPHVNPAFF
Sbjct: 410 DPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFF 455


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score =  226 bits (577), Expect = 4e-57
 Identities = 125/226 (55%), Positives = 137/226 (60%), Gaps = 12/226 (5%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEFYD +AA+ACKEGMNG+ FNGRACVVAFA+  T+KQMG
Sbjct: 246 VKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVAFASQQTLKQMG 305

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK---P 353
           ASY NKN          R P+ND AGRG   NY  GDA             Q        
Sbjct: 306 ASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDAGRNFGRGGWGRGGQGILNRGPG 365

Query: 354 GSGPVRGRGGMMN-KNMT-------XXXXXXXXXXXXXXXXFHAPP-VMMPHQGMMGPGF 506
           G G + GRGG M  KN+                        F  P   M+P Q MM  GF
Sbjct: 366 GGGRMGGRGGSMGAKNIVGGAGGVGSGANGGGYGQGLAGPAFGGPAGAMLPPQSMMRAGF 425

Query: 507 DLAFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           D  +MGRGAGYG F+GPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 426 DPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFF 471


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score =  225 bits (573), Expect = 1e-56
 Identities = 124/224 (55%), Positives = 134/224 (59%), Gaps = 10/224 (4%)
 Frame = +3

Query: 3   VKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMG 182
           VKEIKFFDERASGKSKGYCQVEFYD SAA+ACKEGMNGY FNGRACVVAFA+P T+KQMG
Sbjct: 255 VKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRACVVAFASPQTLKQMG 314

Query: 183 ASYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPPYK---P 353
           ASY NK           R P+ND  GRG G N   GDA             Q        
Sbjct: 315 ASYMNKT--QAQSQSQGRRPMNDGVGRGGGMNMQGGDAGRNYGRGGWGRGGQGILNRGPG 372

Query: 354 GSGPVRGRGGMMN-KNMTXXXXXXXXXXXXXXXXFHAPPV------MMPHQGMMGPGFDL 512
           G GP+RGRGG +  KNM                    P        +M  QGMMG GFD 
Sbjct: 373 GGGPMRGRGGAVGAKNMVGNTAGVGASGGGYGQGLAGPTFGGPAGGLMHPQGMMGSGFDP 432

Query: 513 AFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
            +MGRG  YG FSG  F GM+P FP VN+MGL GVAPHVNPAFF
Sbjct: 433 TYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFF 476


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  224 bits (572), Expect = 2e-56
 Identities = 123/226 (54%), Positives = 135/226 (59%), Gaps = 13/226 (5%)
 Frame = +3

Query: 6   KEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMGA 185
           KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNG+ FNGR CVVAFA+P T+KQMGA
Sbjct: 257 KEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQTLKQMGA 316

Query: 186 SYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQ--PPYKPGS 359
           SY NKN            P+ND  GRG   NY SGD              Q  P   PG 
Sbjct: 317 SYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNFGRGGWGRGGQGVPNRGPGG 376

Query: 360 GPVRGRGGMMNKNM----------TXXXXXXXXXXXXXXXXFHAPPVMMPH-QGMMGPGF 506
           G +RGRG M  +NM                           F  P   M H Q MMG GF
Sbjct: 377 GAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGYGQGLAGPGFGGPAGGMMHPQNMMG-GF 435

Query: 507 DLAFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           D  +MGRG GYG FSGPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFF 481


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
           gi|567891321|ref|XP_006438181.1| hypothetical protein
           CICLE_v10030917mg [Citrus clementina]
           gi|557540376|gb|ESR51420.1| hypothetical protein
           CICLE_v10030917mg [Citrus clementina]
           gi|557540377|gb|ESR51421.1| hypothetical protein
           CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  224 bits (572), Expect = 2e-56
 Identities = 123/226 (54%), Positives = 135/226 (59%), Gaps = 13/226 (5%)
 Frame = +3

Query: 6   KEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGYNFNGRACVVAFATPHTIKQMGA 185
           KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNG+ FNGR CVVAFA+P T+KQMGA
Sbjct: 257 KEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQTLKQMGA 316

Query: 186 SYTNKNXXXXXXXXXXRNPINDAAGRGNGANYPSGDAXXXXXXXXXXXXXQ--PPYKPGS 359
           SY NKN            P+ND  GRG   NY SGD              Q  P   PG 
Sbjct: 317 SYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNFGRGGWGRGGQGVPNRGPGG 376

Query: 360 GPVRGRGGMMNKNM----------TXXXXXXXXXXXXXXXXFHAPPVMMPH-QGMMGPGF 506
           G +RGRG M  +NM                           F  P   M H Q MMG GF
Sbjct: 377 GAMRGRGPMGARNMIGSSSGAGSGAGHAAGGGYGQGLAGPGFGGPAGGMMHPQNMMG-GF 435

Query: 507 DLAFMGRGAGYGNFSGPGFQGMLPPFPGVNSMGLPGVAPHVNPAFF 644
           D  +MGRG GYG FSGPGF GMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFF 481