BLASTX nr result

ID: Mentha24_contig00036111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00036111
         (502 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610...    60   3e-07
ref|XP_002515332.1| conserved hypothetical protein [Ricinus comm...    59   7e-07
gb|ABD78322.1| polyprotein [Primula vulgaris]                          58   2e-06
gb|ABA97402.1| retrotransposon protein, putative, unclassified [...    57   3e-06
gb|EEE62873.1| hypothetical protein OsJ_17676 [Oryza sativa Japo...    57   3e-06
gb|ABA94476.1| retrotransposon protein, putative, unclassified [...    57   3e-06

>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
          Length = 1274

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/62 (41%), Positives = 36/62 (58%)
 Frame = -2

Query: 195 FPTFDGTNLRSWILKCKSYFKLMPNIPDVQKVNLATIHFDGKALMWYQNLNIGEIGITWE 16
           FPTF+G N   W+ KC+ +FK    + +   V LATIH +GKAL W+Q   +     +W 
Sbjct: 89  FPTFEGENPSGWVYKCERFFKYN-GVEESDMVGLATIHLEGKALEWFQGYEVAVAEPSWR 147

Query: 15  QF 10
           QF
Sbjct: 148 QF 149


>ref|XP_002515332.1| conserved hypothetical protein [Ricinus communis]
           gi|223545812|gb|EEF47316.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/63 (44%), Positives = 37/63 (58%)
 Frame = -2

Query: 195 FPTFDGTNLRSWILKCKSYFKLMPNIPDVQKVNLATIHFDGKALMWYQNLNIGEIGITWE 16
           FP FDG+NLR WI KC  YF +   IPD QKV+LA+++   KA  W  +  I    + W 
Sbjct: 37  FPKFDGSNLRQWIKKCCKYF-VFCKIPDKQKVDLASLNMVDKAENWVSSYLINRTAVDWN 95

Query: 15  QFL 7
            F+
Sbjct: 96  DFV 98


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 22/64 (34%), Positives = 38/64 (59%)
 Frame = -2

Query: 195 FPTFDGTNLRSWILKCKSYFKLMPNIPDVQKVNLATIHFDGKALMWYQNLNIGEIGITWE 16
           FP F G N+  W+ K   +F L    P+ Q++ +A +HF+G+ L+WYQNL   ++  +W+
Sbjct: 24  FPKFYGENVVEWVYKANQFFSLYQT-PETQRIKIANLHFEGQPLVWYQNLEKSDLISSWD 82

Query: 15  QFLE 4
              +
Sbjct: 83  NLCD 86


>gb|ABA97402.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 692

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/62 (41%), Positives = 36/62 (58%)
 Frame = -2

Query: 195 FPTFDGTNLRSWILKCKSYFKLMPNIPDVQKVNLATIHFDGKALMWYQNLNIGEIGITWE 16
           FPTF+G  L SWI K + YF L    P+  KV LA +H  G+A  W ++L I    ++W 
Sbjct: 192 FPTFEGDYLESWIRKAEKYFSLYQT-PEEDKVLLAEVHISGRADQWIESLAIATASLSWP 250

Query: 15  QF 10
           +F
Sbjct: 251 EF 252


>gb|EEE62873.1| hypothetical protein OsJ_17676 [Oryza sativa Japonica Group]
          Length = 463

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/62 (41%), Positives = 36/62 (58%)
 Frame = -2

Query: 195 FPTFDGTNLRSWILKCKSYFKLMPNIPDVQKVNLATIHFDGKALMWYQNLNIGEIGITWE 16
           FPTF+G  L SWI K + YF L    P+  KV LA +H  G+A  W ++L I    ++W 
Sbjct: 192 FPTFEGDYLESWIRKAEKYFSLYQT-PEEDKVLLAEVHISGRADQWIESLAIATASLSWP 250

Query: 15  QF 10
           +F
Sbjct: 251 EF 252


>gb|ABA94476.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 940

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/63 (39%), Positives = 40/63 (63%)
 Frame = -2

Query: 192 PTFDGTNLRSWILKCKSYFKLMPNIPDVQKVNLATIHFDGKALMWYQNLNIGEIGITWEQ 13
           P FDG N ++W +KCK+YF++    P+V  V +A + F G AL+W Q  N     ++WE+
Sbjct: 138 PQFDGGNPKAWKMKCKTYFRVSGTSPEVW-VGVAALQFSGGALVWLQTTNAHIEMMSWEE 196

Query: 12  FLE 4
           F++
Sbjct: 197 FVD 199


Top