BLASTX nr result

ID: Mentha24_contig00035932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00035932
         (1032 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004258222.1| hypothetical protein EIN_155680 [Entamoeba i...    46   3e-06
ref|XP_004643784.1| PREDICTED: centromere-associated protein E [...    44   3e-06
ref|YP_008053197.1| chromosome segregation protein SMC [Salinarc...    43   3e-06
ref|XP_005985784.1| PREDICTED: LOW QUALITY PROTEIN: centromere p...    44   9e-06

>ref|XP_004258222.1| hypothetical protein EIN_155680 [Entamoeba invadens IP1]
            gi|440298820|gb|ELP91451.1| hypothetical protein
            EIN_155680 [Entamoeba invadens IP1]
          Length = 3463

 Score = 45.8 bits (107), Expect(2) = 3e-06
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 21/121 (17%)
 Frame = +3

Query: 678  ISNKDIELQHVRNQLKEEQEKMAAAVGMEEVIKTQGNEIDALKTKAEKLEANIQTRKERQ 857
            + N   +++ + N+LKEE+EK+  A    E IK +  ++       EKLE  ++T KE++
Sbjct: 1733 VHNTTEKIKEIENELKEEKEKVEIANKETENIKNENIQL------IEKLEKEVKTNKEKE 1786

Query: 858  ---------------------QGLEIELEKVKKENTKLRSKLNTVKGKKKIVTSRISLSL 974
                                 Q ++ ELEK K+EN K+  +L     +K  +   I+  L
Sbjct: 1787 ERINDELAKTRSEKGQIEKENQTIKTELEKTKEENEKIVEQLKLTTNEKVELEKTINQQL 1846

Query: 975  E 977
            E
Sbjct: 1847 E 1847



 Score = 33.1 bits (74), Expect(2) = 3e-06
 Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
 Frame = +1

Query: 346  DATLEEK---EEKMKKIVDALVVSRKKIEELQSIGN------NLKEMKNGLTDVELMNKE 498
            + T +EK   E KMKK  D L ++ KKIEE++          N + +K+ LT   L N++
Sbjct: 1653 NTTKDEKDKIENKMKKKTDELDMATKKIEEIEKEAQEKIEQLNEQIVKSTLTTQTLENEK 1712

Query: 499  IDKKLTAKTTELEAKESNLQGKI 567
              +K+T +  +++ ++ N+  ++
Sbjct: 1713 --EKITEELNDIKKEKENVDQQV 1733


>ref|XP_004643784.1| PREDICTED: centromere-associated protein E [Octodon degus]
          Length = 2173

 Score = 43.9 bits (102), Expect(2) = 3e-06
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
 Frame = +3

Query: 693  IELQHVRNQLKEEQEKMAAAVG-MEEVIKTQGNEIDALKTKAEKLEANIQTRKERQQGLE 869
            +EL+     ++EE EKM   VG +    +T    ++A+KT+  +    +Q +    Q   
Sbjct: 827  VELEQKYKTVQEENEKMNQEVGSLSREAETLRLSLNAMKTELSQNTPELQQKTAEGQERL 886

Query: 870  IELEKVKKENTKLRSKLNTVKGKKKIVTSRISLSLE 977
             E+E++KKE  ++   L   + +K +VT R+  +LE
Sbjct: 887  REVEQLKKELERINDLLRATEEEKALVTERLQQTLE 922



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
 Frame = +1

Query: 361 EKEEKMKKIVDALVVSRKKIEELQSIGNNLKEMKNGLTDVELMNKEIDKK------LTAK 522
           E E ++  +   L    K+ E LQ   N+L E+K+ L +VE + KEI  K      +T++
Sbjct: 717 ELERRITDLQKELSKEIKENEALQKEMNSLSELKSLLPEVETLRKEIQDKSEELCMITSE 776

Query: 523 ----TTELEAKESNLQGKIAEI 576
                +++  K+S +QG + EI
Sbjct: 777 RDRLCSDVSKKDSRIQGLLEEI 798


>ref|YP_008053197.1| chromosome segregation protein SMC [Salinarchaeum sp. Harcht-Bsk1]
           gi|521281025|ref|WP_020445293.1| chromosome segregation
           protein SMC [Salinarchaeum sp. Harcht-Bsk1]
           gi|507914801|gb|AGN00399.1| chromosome segregation
           protein SMC [Salinarchaeum sp. Harcht-Bsk1]
          Length = 1190

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
 Frame = +1

Query: 223 QEAIAEGHDVQSLLLKIQELEEAGKVYEVLAITG*SMASLFDATLEEKEEKMKKIVDALV 402
           QE + +  D +   L+ ++L E  K YE           L  A LEEK E+ +++ D + 
Sbjct: 219 QERLDQLADERETALEYRDLREEKKEYE---------GYLKAAELEEKREEREELADEIE 269

Query: 403 VSRKKIEELQSIGNNLKEMKNGLT----DVELMNKEIDKKLTAKTTELEAKESNLQGKIA 570
                +EEL+S   +L E +  +T    D+E +N EI++K   +  EL+ +   +Q  IA
Sbjct: 270 AGEADLEELKS---DLDERQGRVTRLQEDLEDLNAEIERKGEDEQMELKREVDAIQNSIA 326

Query: 571 EI 576
            +
Sbjct: 327 RL 328



 Score = 35.4 bits (80), Expect(2) = 3e-06
 Identities = 18/83 (21%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
 Frame = +3

Query: 672 ISISNKDIELQHVRNQLKEEQEKMAAAVG----MEEVIKTQGNEIDALKTKAEKLEANIQ 839
           + +  K+ E+  +  Q++E + + ++        +E ++    +IDA+ T+ E L+  +Q
Sbjct: 351 VKLDRKNEEIDELERQIRETKVEQSSVKSELEERQEALEDVEAKIDAVDTEFEALKDELQ 410

Query: 840 TRKERQQGLEIELEKVKKENTKL 908
           T K+ ++ L  E  ++++E  +L
Sbjct: 411 THKQDREELRSEKNELQREQDRL 433


>ref|XP_005985784.1| PREDICTED: LOW QUALITY PROTEIN: centromere protein E, 312kDa
            [Pantholops hodgsonii]
          Length = 2701

 Score = 43.9 bits (102), Expect(2) = 9e-06
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
 Frame = +3

Query: 672  ISISNKDIELQHVRNQ----------LKEEQEKMAAAVG-MEEVIKTQGNEIDALKTKAE 818
            +S  + D E QHV+N           + EE  K+   +G + +  +  G  ++ALKT+  
Sbjct: 809  LSCESTDQEFQHVKNHHIEFEQKYKMVLEENAKLNQEIGNLSKEAEELGLNLEALKTELS 868

Query: 819  KLEANIQTRKERQQGLEIELEKVKKENTKLRSKLNTVKGKKKIVTSRISLSL 974
                 +Q +    Q    E+E++KK+     SKL  V+ +K ++T ++  +L
Sbjct: 869  HKTQELQQKTTETQERSNEVEELKKQLESRESKLQMVEKEKTLITEKLQQTL 920



 Score = 33.1 bits (74), Expect(2) = 9e-06
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
 Frame = +1

Query: 361 EKEEKMKKIVDALVVSRKKIEELQSIGNNLKEMKNGLTDVELMNKEIDKK------LTAK 522
           E E K+  +   L  + K+ E L++  N L E+K+  ++VE++ KEI  K      +T++
Sbjct: 716 ELERKITHLQKELNKAVKENETLRNEVNLLSELKSLPSEVEMLRKEIRDKSEELYIVTSE 775

Query: 523 ----TTELEAKESNLQGKIAEI 576
               ++E+  KES +QG + EI
Sbjct: 776 KDKLSSEVVDKESRIQGLLEEI 797


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