BLASTX nr result

ID: Mentha24_contig00035766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00035766
         (305 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus...    59   9e-07
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...    55   8e-06

>gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus]
          Length = 515

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = -1

Query: 161 MEFVSVSSSAARTHLELGVKYLTRDSLSRRPVVLSFQKDKNKNLALIAPRES 6
           M  V+VS+SA+RT L L  +YLTR S+ RRPVV +F+ DK K + LI+PRES
Sbjct: 1   MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRES 52


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/53 (54%), Positives = 39/53 (73%)
 Frame = -1

Query: 161 MEFVSVSSSAARTHLELGVKYLTRDSLSRRPVVLSFQKDKNKNLALIAPRESI 3
           M  V+VSSSA+R+ L L  ++ TR    +RPV++SF+KDK KN  LIAP+ESI
Sbjct: 1   MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESI 53


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