BLASTX nr result

ID: Mentha24_contig00035477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00035477
         (390 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45401.1| hypothetical protein MIMGU_mgv1a004129mg [Mimulus...    65   8e-09
ref|XP_004297565.1| PREDICTED: SWI/SNF complex component SNF12 h...    61   2e-07
ref|XP_007209877.1| hypothetical protein PRUPE_ppa003897mg [Prun...    59   7e-07
dbj|BAK08216.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   7e-07
gb|EXB98011.1| SWI/SNF complex component SNF12-like protein [Mor...    58   2e-06
ref|XP_007037963.1| SWIB/MDM2 domain superfamily protein isoform...    58   2e-06
gb|EMT24372.1| hypothetical protein F775_26503 [Aegilops tauschii]     58   2e-06
gb|EMS51008.1| SWI/SNF complex component SNF12-like protein [Tri...    58   2e-06
ref|XP_003579601.1| PREDICTED: SWI/SNF complex component SNF12 h...    58   2e-06
ref|XP_006477023.1| PREDICTED: SWI/SNF complex component SNF12 h...    57   2e-06
ref|XP_002461115.1| hypothetical protein SORBIDRAFT_02g041010 [S...    57   3e-06
ref|XP_007151528.1| hypothetical protein PHAVU_004G054400g [Phas...    55   8e-06
ref|XP_007037962.1| SWIB/MDM2 domain superfamily protein isoform...    55   8e-06
ref|XP_003553847.1| PREDICTED: SWI/SNF complex component SNF12 h...    55   8e-06
ref|XP_006373227.1| SWIB complex BAF60b domain-containing family...    55   8e-06
ref|XP_001753234.1| SWI/SNF transcription activation complex sub...    55   8e-06

>gb|EYU45401.1| hypothetical protein MIMGU_mgv1a004129mg [Mimulus guttatus]
          Length = 543

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRKLPGDA 296
           AEKERHSDF+NQPWVEDAVIRYLNRK+P DA
Sbjct: 509 AEKERHSDFFNQPWVEDAVIRYLNRKMPSDA 539


>ref|XP_004297565.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Fragaria vesca
           subsp. vesca]
          Length = 535

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRKLPGDASG 290
           AEKER SDFYNQPWVEDAVIRYLNRK   DA G
Sbjct: 501 AEKERRSDFYNQPWVEDAVIRYLNRKSGSDAPG 533


>ref|XP_007209877.1| hypothetical protein PRUPE_ppa003897mg [Prunus persica]
           gi|462405612|gb|EMJ11076.1| hypothetical protein
           PRUPE_ppa003897mg [Prunus persica]
          Length = 541

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRKLPG-DASG 290
           AEKER SDFYNQPWVEDAVIRYLNRK  G DA G
Sbjct: 506 AEKERRSDFYNQPWVEDAVIRYLNRKSAGSDAPG 539


>dbj|BAK08216.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 465

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -3

Query: 385 EKERHSDFYNQPWVEDAVIRYLNRKLPGDASG 290
           E+ER +DFYNQPWVEDAVIRYLNRK PG + G
Sbjct: 428 ERERRADFYNQPWVEDAVIRYLNRKPPGGSDG 459


>gb|EXB98011.1| SWI/SNF complex component SNF12-like protein [Morus notabilis]
          Length = 544

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/33 (84%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
 Frame = -3

Query: 385 EKERHSDFYNQPWVEDAVIRYLNRKLPG-DASG 290
           EKER SDFYNQPWVEDAVIRYLNRK  G DA G
Sbjct: 510 EKERRSDFYNQPWVEDAVIRYLNRKTAGSDAPG 542


>ref|XP_007037963.1| SWIB/MDM2 domain superfamily protein isoform 3 [Theobroma cacao]
           gi|508775208|gb|EOY22464.1| SWIB/MDM2 domain superfamily
           protein isoform 3 [Theobroma cacao]
          Length = 552

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRK-LPGDASG 290
           AEKER S+FYNQPW+EDAVIRYLNRK + GDA G
Sbjct: 517 AEKERQSEFYNQPWIEDAVIRYLNRKSMGGDALG 550


>gb|EMT24372.1| hypothetical protein F775_26503 [Aegilops tauschii]
          Length = 463

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = -3

Query: 385 EKERHSDFYNQPWVEDAVIRYLNRKLPGDASG 290
           E+ER +DFYNQPWVEDAVIRYLNRK PG   G
Sbjct: 426 ERERRADFYNQPWVEDAVIRYLNRKPPGGNDG 457


>gb|EMS51008.1| SWI/SNF complex component SNF12-like protein [Triticum urartu]
          Length = 417

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = -3

Query: 385 EKERHSDFYNQPWVEDAVIRYLNRKLPGDASG 290
           E+ER +DFYNQPWVEDAVIRYLNRK PG   G
Sbjct: 380 ERERRADFYNQPWVEDAVIRYLNRKPPGGNDG 411


>ref|XP_003579601.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Brachypodium
           distachyon]
          Length = 526

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = -3

Query: 385 EKERHSDFYNQPWVEDAVIRYLNRKLPGDASG 290
           E+ER +DFYNQPWVEDAVIRYLNRK PG   G
Sbjct: 489 ERERRADFYNQPWVEDAVIRYLNRKPPGGNEG 520


>ref|XP_006477023.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1
           [Citrus sinensis] gi|568846360|ref|XP_006477024.1|
           PREDICTED: SWI/SNF complex component SNF12 homolog
           isoform X2 [Citrus sinensis]
          Length = 559

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRKLPG-DASG 290
           AEKER SDF+NQPWVEDAVIRY+NRK  G DA+G
Sbjct: 524 AEKERRSDFFNQPWVEDAVIRYMNRKSAGSDAAG 557


>ref|XP_002461115.1| hypothetical protein SORBIDRAFT_02g041010 [Sorghum bicolor]
           gi|241924492|gb|EER97636.1| hypothetical protein
           SORBIDRAFT_02g041010 [Sorghum bicolor]
          Length = 503

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = -3

Query: 385 EKERHSDFYNQPWVEDAVIRYLNRKLPGDASG 290
           EKER +DFYNQPWVEDAVIRYLNRK   + SG
Sbjct: 466 EKERRADFYNQPWVEDAVIRYLNRKPANEGSG 497


>ref|XP_007151528.1| hypothetical protein PHAVU_004G054400g [Phaseolus vulgaris]
           gi|593702239|ref|XP_007151529.1| hypothetical protein
           PHAVU_004G054400g [Phaseolus vulgaris]
           gi|561024837|gb|ESW23522.1| hypothetical protein
           PHAVU_004G054400g [Phaseolus vulgaris]
           gi|561024838|gb|ESW23523.1| hypothetical protein
           PHAVU_004G054400g [Phaseolus vulgaris]
          Length = 547

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/35 (77%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRK--LPGDASG 290
           AEKER SDF+NQPWVEDAVIRYLNRK  +  DA G
Sbjct: 511 AEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDAPG 545


>ref|XP_007037962.1| SWIB/MDM2 domain superfamily protein isoform 2 [Theobroma cacao]
           gi|508775207|gb|EOY22463.1| SWIB/MDM2 domain superfamily
           protein isoform 2 [Theobroma cacao]
          Length = 562

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRKLPG 302
           AEKER S+FYNQPW+EDAVIRYLNRK  G
Sbjct: 517 AEKERQSEFYNQPWIEDAVIRYLNRKSMG 545


>ref|XP_003553847.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1
           [Glycine max] gi|571555115|ref|XP_006604071.1|
           PREDICTED: SWI/SNF complex component SNF12 homolog
           isoform X2 [Glycine max]
          Length = 543

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/35 (77%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRK--LPGDASG 290
           AEKER SDF+NQPWVEDAVIRYLNRK  +  DA G
Sbjct: 507 AEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDAPG 541


>ref|XP_006373227.1| SWIB complex BAF60b domain-containing family protein [Populus
           trichocarpa] gi|550319933|gb|ERP51024.1| SWIB complex
           BAF60b domain-containing family protein [Populus
           trichocarpa]
          Length = 408

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/35 (77%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRK--LPGDASG 290
           AEKER SDF+NQPWVEDAVIRYLNRK  +  DA G
Sbjct: 372 AEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDAPG 406


>ref|XP_001753234.1| SWI/SNF transcription activation complex subunit [Physcomitrella
           patens] gi|162695520|gb|EDQ81863.1| SWI/SNF
           transcription activation complex subunit [Physcomitrella
           patens]
          Length = 421

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 388 AEKERHSDFYNQPWVEDAVIRYLNRK 311
           AEKER SDFYNQPWVEDAVIRYLNR+
Sbjct: 384 AEKERRSDFYNQPWVEDAVIRYLNRR 409


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