BLASTX nr result

ID: Mentha24_contig00034225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00034225
         (433 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative ...    59   7e-07
gb|EXC33082.1| Transcription elongation regulator 1 [Morus notab...    58   2e-06

>ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative [Ricinus communis]
            gi|223545064|gb|EEF46576.1| Pre-mRNA-processing protein
            PRP40, putative [Ricinus communis]
          Length = 886

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/63 (44%), Positives = 36/63 (57%)
 Frame = +3

Query: 3    PRYNKMARKEREALWRRHADEILRXXXXXXXXXXXXXXXXXKTKTSIDSGKHSSALRRPY 182
            PRYNKM RKERE LWRRHA+++LR                    ++ DSG+H S  +R +
Sbjct: 824  PRYNKMPRKEREVLWRRHAEDMLRKQKTTLDEKEDKHTDPRGRSSTTDSGRHLSGSKRTH 883

Query: 183  DRR 191
            DRR
Sbjct: 884  DRR 886


>gb|EXC33082.1| Transcription elongation regulator 1 [Morus notabilis]
          Length = 829

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = +3

Query: 3   PRYNKMARKEREALWRRHADEILRXXXXXXXXXXXXXXXXXKTKTSIDSGKHSSALRRPY 182
           PRYNKM RK+RE LWRR+A+++LR                 + +TS+DSG+  S LR  +
Sbjct: 767 PRYNKMPRKDRETLWRRYAEDMLRKQQKSEPNSKEDKKIDPRNRTSVDSGRLPSGLRGTH 826

Query: 183 DRR 191
           +RR
Sbjct: 827 ERR 829


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