BLASTX nr result

ID: Mentha24_contig00032972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00032972
         (455 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT12672.1| hypothetical protein F775_05364 [Aegilops tauschii]     56   5e-06
emb|CAD41578.3| OSJNBa0088I22.10 [Oryza sativa Japonica Group]         56   5e-06
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    56   6e-06

>gb|EMT12672.1| hypothetical protein F775_05364 [Aegilops tauschii]
          Length = 615

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
 Frame = -3

Query: 300 GCYSIQGPVKTSSSTIPRAPTKLL-----TAAEMAARRENGLCYNCDEPF-VPAVLQPLL 139
           G +++   + T+++++   P K +       AE+   + + +  +  E F  P  +Q LL
Sbjct: 508 GKHTVSTAMFTNAASVKEVPPKKMHKLMDKGAEVFLCQVHNIIVDAGEGFKTPPQIQKLL 567

Query: 138 EEYADIFEEPKGLPPERGVEHHIVLKPGSNPKHQH 34
            EYAD+FEEPK LPP R + H I L  G+ P H++
Sbjct: 568 LEYADLFEEPKELPPHRALNHKIPLVAGATPPHEY 602


>emb|CAD41578.3| OSJNBa0088I22.10 [Oryza sativa Japonica Group]
          Length = 1157

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = -3

Query: 171 PFVPAVLQPLLEEYADIFEEPKGLPPERGVEHHIVLKPGSNPKHQHPW 28
           P +P ++QPLL E+ ++F+EPKGLPP+R  +H I L P S P    P+
Sbjct: 489 PSIPEIVQPLLTEFQEVFQEPKGLPPKRYCDHRIPLFPNSKPVFIRPY 536


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 955

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = -3

Query: 177 DEPFVPAVLQPLLEEYADIFEEPKGLPPERGVEHHIVLKPGSNPKHQHPW 28
           +E  VPA +Q +L ++  + +EPKGLPP R  +H I LKPGS P +Q P+
Sbjct: 8   EEAAVPADVQEVLSQFPGVMKEPKGLPPRRACDHVINLKPGSEPPNQRPY 57


Top