BLASTX nr result

ID: Mentha24_contig00032651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00032651
         (322 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517852.1| homeobox protein, putative [Ricinus communis...    68   2e-09
emb|CBI21902.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002275272.1| PREDICTED: uncharacterized protein LOC100250...    57   2e-06
emb|CAN76810.1| hypothetical protein VITISV_044061 [Vitis vinifera]    57   2e-06
ref|XP_006372757.1| hypothetical protein POPTR_0017s04760g [Popu...    57   4e-06

>ref|XP_002517852.1| homeobox protein, putative [Ricinus communis]
            gi|223542834|gb|EEF44370.1| homeobox protein, putative
            [Ricinus communis]
          Length = 1784

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 15/110 (13%)
 Frame = -1

Query: 322  RTRARGGHTKKGRRSIQSRQKPKSGGKGI---------IINDETALPVQEEEWNLEAIPV 170
            ++RARGG  K+GRRS++SRQKP      +         II ++    ++ E+WN++    
Sbjct: 1608 QSRARGGR-KRGRRSVRSRQKPVKRAVDVAAQTNVAKEIIYEKVPTKLEREDWNIDETRF 1666

Query: 169  ETEGAENVSSSDRSEFDNDN------EIDNVGYDDFSGNVEFGKGDERAE 38
            ++  AEN+SSS+RSE+D++N      E D++  DD++G    GK D+  E
Sbjct: 1667 QSRIAENLSSSERSEYDDENGQATGDEYDDLPVDDYTGGFN-GKSDDLLE 1715


>emb|CBI21902.3| unnamed protein product [Vitis vinifera]
          Length = 1870

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 23/118 (19%)
 Frame = -1

Query: 322  RTRARGGHTKKGRRSIQSRQKPKSGGKGIIINDETALPVQ---EEEWNLEAIPVE-TEGA 155
            RTR RGG  ++GRR+++SRQKP       I  +    P     + EWN+E    E  E A
Sbjct: 1702 RTRGRGGR-RRGRRTVRSRQKPVKQVVEDIPEEIIFKPPPRNLDREWNVETPTREPVEEA 1760

Query: 154  ENVSSSDRS-EFDNDN------EIDNVGYDDFSG------------NVEFGKGDERAE 38
            ENVSSS+ S E+D+DN      E D++G D++SG            + E G GDE  E
Sbjct: 1761 ENVSSSESSEEYDDDNGQGTGDECDDLGVDEYSGPFNGKSEDVIEESDEIGDGDEDEE 1818


>ref|XP_002275272.1| PREDICTED: uncharacterized protein LOC100250601 [Vitis vinifera]
          Length = 1772

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 23/118 (19%)
 Frame = -1

Query: 322  RTRARGGHTKKGRRSIQSRQKPKSGGKGIIINDETALPVQ---EEEWNLEAIPVE-TEGA 155
            RTR RGG  ++GRR+++SRQKP       I  +    P     + EWN+E    E  E A
Sbjct: 1604 RTRGRGGR-RRGRRTVRSRQKPVKQVVEDIPEEIIFKPPPRNLDREWNVETPTREPVEEA 1662

Query: 154  ENVSSSDRS-EFDNDN------EIDNVGYDDFSG------------NVEFGKGDERAE 38
            ENVSSS+ S E+D+DN      E D++G D++SG            + E G GDE  E
Sbjct: 1663 ENVSSSESSEEYDDDNGQGTGDECDDLGVDEYSGPFNGKSEDVIEESDEIGDGDEDEE 1720


>emb|CAN76810.1| hypothetical protein VITISV_044061 [Vitis vinifera]
          Length = 1496

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 23/118 (19%)
 Frame = -1

Query: 322  RTRARGGHTKKGRRSIQSRQKPKSGGKGIIINDETALPVQ---EEEWNLEAIPVE-TEGA 155
            RTR RGG  ++GRR+++SRQKP       I  +    P     + EWN+E    E  E A
Sbjct: 1328 RTRGRGGR-RRGRRTVRSRQKPVKQVVEDIPEEIIFKPPPRNLDREWNVETPTREPVEEA 1386

Query: 154  ENVSSSDRS-EFDNDN------EIDNVGYDDFSG------------NVEFGKGDERAE 38
            ENVSSS+ S E+D+DN      E D++G D++SG            + E G GDE  E
Sbjct: 1387 ENVSSSESSEEYDDDNGQGTGDECDDLGVDEYSGPFNGKSEDVIEESDEIGDGDEDEE 1444


>ref|XP_006372757.1| hypothetical protein POPTR_0017s04760g [Populus trichocarpa]
            gi|550319405|gb|ERP50554.1| hypothetical protein
            POPTR_0017s04760g [Populus trichocarpa]
          Length = 1746

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 17/112 (15%)
 Frame = -1

Query: 322  RTRARGGHTKKGRRSIQSRQKPKSGGKGII---------INDETALPVQEEEWNLEAIPV 170
            R R RGG  K+GRRS++SRQK        I         I +++   +  ++WN +    
Sbjct: 1591 RPRGRGG-CKRGRRSVRSRQKAVKQASDFIPERKIPQETIREQSTNCLGRDDWNGDETRF 1649

Query: 169  ETEGAENVSSSDRSEFDNDN--------EIDNVGYDDFSGNVEFGKGDERAE 38
              E AEN SSS+RSE+D++N        E DN+  DD++G    GK D+  E
Sbjct: 1650 -VEDAENASSSERSEYDDENENILASGDEYDNMRVDDYAGGFN-GKSDDLLE 1699


Top