BLASTX nr result
ID: Mentha24_contig00032162
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00032162
(776 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l... 65 2e-08
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T... 60 9e-07
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T... 60 9e-07
ref|XP_002320019.2| FF domain-containing family protein [Populus... 59 3e-06
ref|XP_002522113.1| protein binding protein, putative [Ricinus c... 58 3e-06
ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 58 4e-06
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l... 58 4e-06
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 58 4e-06
emb|CBI19367.3| unnamed protein product [Vitis vinifera] 58 4e-06
ref|XP_002510055.1| protein binding protein, putative [Ricinus c... 57 6e-06
>ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
subsp. vesca]
Length = 990
Score = 65.5 bits (158), Expect = 2e-08
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +2
Query: 269 EKERSRSHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGEY 448
EKE S+ HR+ SD KKS+ K+ + E+D EN+ ++ K++H DGS RN E + GE
Sbjct: 927 EKEDSKKHRHSSDRKKSR---KRAYTPESDSENRHRRHKKEHRDGSRRNGGYEELEDGEV 983
Query: 449 GEDGEVQ 469
GEDGE+Q
Sbjct: 984 GEDGEIQ 990
>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
40A isoform 3 [Theobroma cacao]
Length = 1041
Score = 60.1 bits (144), Expect = 9e-07
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = +2
Query: 272 KERSRSHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGEYG 451
+E +S R+ SD KKS+ K + E+D E++ KK KRDH DGS RN+ E + GE G
Sbjct: 979 EESKKSRRHGSDRKKSR---KHAHSPESDNESRHKKHKRDHRDGSRRNSGYEELEDGEVG 1035
Query: 452 EDGEVQ 469
EDGE+Q
Sbjct: 1036 EDGEIQ 1041
>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
protein 40A isoform 1 [Theobroma cacao]
gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
40A isoform 1 [Theobroma cacao]
gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
40A isoform 1 [Theobroma cacao]
Length = 1032
Score = 60.1 bits (144), Expect = 9e-07
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = +2
Query: 272 KERSRSHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGEYG 451
+E +S R+ SD KKS+ K + E+D E++ KK KRDH DGS RN+ E + GE G
Sbjct: 970 EESKKSRRHGSDRKKSR---KHAHSPESDNESRHKKHKRDHRDGSRRNSGYEELEDGEVG 1026
Query: 452 EDGEVQ 469
EDGE+Q
Sbjct: 1027 EDGEIQ 1032
>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
gi|550323102|gb|EEE98334.2| FF domain-containing family
protein [Populus trichocarpa]
Length = 1019
Score = 58.5 bits (140), Expect = 3e-06
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 269 EKERSR-SHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGE 445
EKE S+ S ++ SD KKS+ K + E+D E+Q K+ KRDH DGS RN NE + GE
Sbjct: 945 EKEESKKSRKHSSDRKKSR---KHTYTPESDGESQHKRHKRDHRDGSRRNGSNEELEDGE 1001
Query: 446 YGEDGEVQ 469
G+D E++
Sbjct: 1002 LGDDVEIR 1009
>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
gi|223538712|gb|EEF40313.1| protein binding protein,
putative [Ricinus communis]
Length = 956
Score = 58.2 bits (139), Expect = 3e-06
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Frame = +2
Query: 269 EKERSRS-HRYISDSKKSKQVEKQLWN---DEADMENQSKKQKRDHGDGSSRNNDNEVRK 436
EK+RS+S HR+ SD KKSK W+ ++D E++ K+ KRDH +GS R D+E +
Sbjct: 892 EKDRSKSSHRHSSDHKKSK------WHASTPDSDGESRHKRHKRDHRNGSRRYGDHEELE 945
Query: 437 IGEYGEDGEVQ 469
GE+GEDGE +
Sbjct: 946 DGEFGEDGETR 956
>ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein
40A-like, partial [Cucumis sativus]
Length = 803
Score = 57.8 bits (138), Expect = 4e-06
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +2
Query: 272 KERSRSHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGEYG 451
+E +S ++ SD KKS+ K ++ E+D EN+ ++ KRDH DGS RN+D + GE G
Sbjct: 743 EESKKSRKHGSDRKKSR---KHAYSPESDSENRHRRHKRDHRDGSRRNHDE--LEDGELG 797
Query: 452 EDGEVQ 469
EDGE+Q
Sbjct: 798 EDGEIQ 803
>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
Length = 985
Score = 57.8 bits (138), Expect = 4e-06
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +2
Query: 272 KERSRSHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGEYG 451
+E +S ++ SD KKS+ K ++ E+D EN+ ++ KRDH DGS RN+D + GE G
Sbjct: 925 EESKKSRKHGSDRKKSR---KHAYSPESDSENRHRRHKRDHRDGSRRNHDE--LEDGELG 979
Query: 452 EDGEVQ 469
EDGE+Q
Sbjct: 980 EDGEIQ 985
>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
vinifera]
Length = 1020
Score = 57.8 bits (138), Expect = 4e-06
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 269 EKERSR-SHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGE 445
EKE S+ S R+ SD KKS+ K + E+D E++ K+ KR+H DGS RN E + GE
Sbjct: 956 EKEESKKSRRHGSDRKKSR---KHAYTPESDTESRHKRHKREHWDGSRRNGGYEELEDGE 1012
Query: 446 YGEDGEVQ 469
GEDGE++
Sbjct: 1013 LGEDGEIR 1020
>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
Length = 1030
Score = 57.8 bits (138), Expect = 4e-06
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 269 EKERSR-SHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGE 445
EKE S+ S R+ SD KKS+ K + E+D E++ K+ KR+H DGS RN E + GE
Sbjct: 966 EKEESKKSRRHGSDRKKSR---KHAYTPESDTESRHKRHKREHWDGSRRNGGYEELEDGE 1022
Query: 446 YGEDGEVQ 469
GEDGE++
Sbjct: 1023 LGEDGEIR 1030
>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
gi|223550756|gb|EEF52242.1| protein binding protein,
putative [Ricinus communis]
Length = 970
Score = 57.4 bits (137), Expect = 6e-06
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +2
Query: 269 EKERSR-SHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVRKIGE 445
EKE SR S ++ SD KKS+ K + E+D EN+ KK KRD + S +N D + + GE
Sbjct: 906 EKEESRKSRKHSSDRKKSR---KHSYTPESDSENRHKKHKRDQRESSRKNGDYDDLEDGE 962
Query: 446 YGEDGEVQ 469
GEDGE+Q
Sbjct: 963 LGEDGEIQ 970