BLASTX nr result

ID: Mentha24_contig00031272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00031272
         (400 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21545.3| unnamed protein product [Vitis vinifera]               59   9e-07
ref|XP_006381970.1| hypothetical protein POPTR_0006s22590g, part...    56   5e-06

>emb|CBI21545.3| unnamed protein product [Vitis vinifera]
          Length = 80

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = +3

Query: 162 SDIQGRRKNSISSQAWRRRKLLGGHCECFEKQALRFSIIAIE 287
           SDIQGR  +S +SQAW+RRKLLGG+CECFEKQA    II IE
Sbjct: 10  SDIQGRI-SSTNSQAWQRRKLLGGYCECFEKQAFGVVIIDIE 50


>ref|XP_006381970.1| hypothetical protein POPTR_0006s22590g, partial [Populus
           trichocarpa] gi|550336872|gb|ERP59767.1| hypothetical
           protein POPTR_0006s22590g, partial [Populus trichocarpa]
          Length = 73

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +3

Query: 183 KNSISSQAWRRRKLLGGHCECFEKQALRFSIIAIE 287
           K+S+ +QAWRRRK LGGHCECFEKQA  F II ++
Sbjct: 2   KSSMRTQAWRRRKHLGGHCECFEKQAFEFIIIDLQ 36


Top