BLASTX nr result

ID: Mentha24_contig00031260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00031260
         (544 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78971.1| hypothetical protein (mitochondrion) [Vicia faba]...    87   3e-15
ref|XP_002535295.1| conserved hypothetical protein [Ricinus comm...    75   1e-11
emb|CAA27743.1| URF-1 [Citrullus lanatus]                              65   2e-11
sp|P08834.1|NU1M_CITLA RecName: Full=NADH-ubiquinone oxidoreduct...    65   2e-11
gb|EXC33548.1| putative mitochondrial protein [Morus notabilis]        65   1e-08
gb|EXB67640.1| hypothetical protein L484_010205 [Morus notabilis]      64   2e-08
gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays] g...    62   1e-07
ref|YP_002608374.1| orf102 [Vitis vinifera] gi|209954171|emb|CAQ...    59   8e-07
ref|YP_717140.1| hypothetical protein BrnapMp043 [Brassica napus...    59   1e-06

>gb|AGC78971.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803263|gb|AGC78998.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 115

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 52/81 (64%), Positives = 57/81 (70%)
 Frame = -3

Query: 431 SISQKQIPPPPMLPRSAYRGIERKDPGPEQVGLG*RAVSAVGGDRERARTVHRRI*XXXX 252
           SISQK+I PP MLPRSAYRGIER+D GPEQVGLG RAVSAVGG  +R  +   +      
Sbjct: 3   SISQKRISPPLMLPRSAYRGIEREDRGPEQVGLGYRAVSAVGG-LQRTCSYGSKKGMINS 61

Query: 251 XXXXXXXLYSKYAFLGALRSA 189
                  LYSKYAFLGALRSA
Sbjct: 62  LLGTFTPLYSKYAFLGALRSA 82


>ref|XP_002535295.1| conserved hypothetical protein [Ricinus communis]
           gi|223523525|gb|EEF27089.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 139

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -3

Query: 404 PPMLPRSAYRGIERKDPGPEQVGLG*RAVSAVGGDRERARTV 279
           PPMLP+SAYRGIER+DPGPEQVGLG RAVSA+GGDR RAR +
Sbjct: 62  PPMLPQSAYRGIEREDPGPEQVGLGYRAVSAMGGDRGRARAL 103


>emb|CAA27743.1| URF-1 [Citrullus lanatus]
          Length = 316

 Score = 65.5 bits (158), Expect(2) = 2e-11
 Identities = 33/52 (63%), Positives = 37/52 (71%)
 Frame = -2

Query: 459 KVSEREIDTFYQSKADTAPPHAPTVRLPRNRKEGPGARASWVGVESRKRGGG 304
           +V E +   F   K+   PPHAP VRLPRNRK   GARASWVGV+SRKRGGG
Sbjct: 45  QVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRTGARASWVGVKSRKRGGG 96



 Score = 29.3 bits (64), Expect(2) = 2e-11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 227 YSKYAFLGALRSA 189
           YSKYAFLGALRSA
Sbjct: 105 YSKYAFLGALRSA 117


>sp|P08834.1|NU1M_CITLA RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName:
           Full=NADH dehydrogenase subunit 1
          Length = 316

 Score = 65.5 bits (158), Expect(2) = 2e-11
 Identities = 33/52 (63%), Positives = 37/52 (71%)
 Frame = -2

Query: 459 KVSEREIDTFYQSKADTAPPHAPTVRLPRNRKEGPGARASWVGVESRKRGGG 304
           +V E +   F   K+   PPHAP VRLPRNRK   GARASWVGV+SRKRGGG
Sbjct: 45  QVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRTGARASWVGVKSRKRGGG 96



 Score = 29.3 bits (64), Expect(2) = 2e-11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 227 YSKYAFLGALRSA 189
           YSKYAFLGALRSA
Sbjct: 105 YSKYAFLGALRSA 117


>gb|EXC33548.1| putative mitochondrial protein [Morus notabilis]
          Length = 478

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/49 (73%), Positives = 39/49 (79%)
 Frame = -3

Query: 431 SISQKQIPPPPMLPRSAYRGIERKDPGPEQVGLG*RAVSAVGGDRERAR 285
           SISQK IPP P   RSA RGIE+++ GPEQVGLG RAVS VGGDR RAR
Sbjct: 187 SISQKWIPPQP---RSAPRGIEKENLGPEQVGLGYRAVSVVGGDRGRAR 232


>gb|EXB67640.1| hypothetical protein L484_010205 [Morus notabilis]
          Length = 79

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = -3

Query: 398 MLPRSAYRGIERKDPGPEQVGLG*RAVSAVGGDRERARTVHRR 270
           MLP SA RGIER++ GPEQVGLG R +SAVGGDR RARTV RR
Sbjct: 1   MLPWSAPRGIERENLGPEQVGLGYRVISAVGGDRGRARTVQRR 43


>gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays]
           gi|413923490|gb|AFW63422.1| hypothetical protein
           ZEAMMB73_397358 [Zea mays] gi|413923799|gb|AFW63731.1|
           hypothetical protein ZEAMMB73_879039 [Zea mays]
           gi|413923800|gb|AFW63732.1| hypothetical protein
           ZEAMMB73_879039 [Zea mays]
          Length = 172

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/56 (55%), Positives = 36/56 (64%)
 Frame = -1

Query: 409 RPPPCSHGPLTEE*KGRTRGQSKLGWGREP*ARWGVTENVLVRFIEGYDKLLDCWE 242
           R PP  HGPLTEE      G  ++G G    +  GVTE+VLVRFI GYD L+DCWE
Sbjct: 68  RIPPSFHGPLTEEEMREDPGPEQVGLGYRAVSAVGVTEDVLVRFIVGYDILVDCWE 123


>ref|YP_002608374.1| orf102 [Vitis vinifera] gi|209954171|emb|CAQ77618.1| orf102 [Vitis
           vinifera] gi|239764768|gb|ACS15237.1| ORF102 [Vitis
           vinifera]
          Length = 101

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -2

Query: 471 RSSLKVSEREIDTFYQSKADTAPPHAPTVRLPRNRKEGPGARASWVGV 328
           R  L +S+++I           PPHAPTVRLPRNRK GPGARASWVGV
Sbjct: 64  REMLSISQKQIP----------PPHAPTVRLPRNRKGGPGARASWVGV 101


>ref|YP_717140.1| hypothetical protein BrnapMp043 [Brassica napus]
           gi|353526443|ref|YP_004927515.1| orf100b (mitochondrion)
           [Brassica oleracea] gi|353526482|ref|YP_004927553.1|
           orf100b (mitochondrion) [Brassica carinata]
           gi|353526689|ref|YP_004927858.1| orf100b (mitochondrion)
           [Brassica rapa subsp. oleifera]
           gi|353531371|ref|YP_004927761.1| orf100b (mitochondrion)
           [Brassica juncea] gi|37591087|dbj|BAC98889.1|
           hypothetical protein [Brassica napus]
           gi|335354877|gb|AEH43433.1| orf100b [Brassica rapa
           subsp. oleifera] gi|335354988|gb|AEH43543.1| orf100b
           [Brassica oleracea] gi|335355013|gb|AEH43567.1| orf100b
           [Brassica carinata] gi|335355104|gb|AEH43657.1| orf100b
           [Brassica juncea] gi|339511304|emb|CBX48359.1| unnamed
           protein product [Brassica napus]
           gi|371925847|gb|AEX57648.1| hypothetical protein
           RasatMp017 (mitochondrion) [Raphanus sativus]
           gi|443298163|gb|AGC81707.1| hypothetical protein
           DCGMS_00470 (mitochondrion) [Raphanus sativus]
          Length = 100

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/38 (76%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
 Frame = -2

Query: 438 DTFYQSKADTAPPHAPTVRLPRNRKEGP-GARASWVGV 328
           D FYQSK D+AP HAPT RLPRNRK GP G+RAS VGV
Sbjct: 63  DAFYQSKGDSAPRHAPTARLPRNRKGGPGGSRASRVGV 100


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