BLASTX nr result
ID: Mentha24_contig00030932
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00030932
(317 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 65 7e-09
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 65 7e-09
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 65 1e-08
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,... 65 1e-08
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,... 65 1e-08
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei... 63 5e-08
ref|XP_006428571.1| hypothetical protein CICLE_v100108902mg, par... 63 5e-08
ref|XP_007149260.1| hypothetical protein PHAVU_005G055300g [Phas... 62 6e-08
ref|XP_006416344.1| hypothetical protein EUTSA_v10006525mg [Eutr... 62 6e-08
emb|CBI36671.3| unnamed protein product [Vitis vinifera] 62 6e-08
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 62 6e-08
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 62 6e-08
ref|XP_004304804.1| PREDICTED: U5 small nuclear ribonucleoprotei... 62 8e-08
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 61 1e-07
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 61 2e-07
ref|XP_006295588.1| hypothetical protein CARUB_v10024696mg [Caps... 61 2e-07
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 61 2e-07
ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [A... 60 2e-07
ref|XP_002879976.1| hypothetical protein ARALYDRAFT_483318 [Arab... 60 2e-07
gb|AAL24152.2| putative ATP-dependent RNA helicase [Arabidopsis ... 60 2e-07
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDD 214
K+YTLYFMCDSYLGCDQEYSFTVDVK+A ++D
Sbjct: 2141 KSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFDED 2174
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDD 214
K+YTLYFMCDSYLGCDQEYSFTVDVK+A ++D
Sbjct: 2141 KSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFDED 2174
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDD 214
K+YTLYFMCDSYLGCDQEYSF VDVKEAG ++D
Sbjct: 1776 KSYTLYFMCDSYLGCDQEYSFNVDVKEAGGPDED 1809
>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS 211
KAYTLYFMCDSYLGCDQEY+FTVD KEA ++DS
Sbjct: 2025 KAYTLYFMCDSYLGCDQEYNFTVDAKEAAGPDEDS 2059
>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS 211
KAYTLYFMCDSYLGCDQEY+FTVD KEA ++DS
Sbjct: 2139 KAYTLYFMCDSYLGCDQEYNFTVDAKEAAGPDEDS 2173
>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Citrus sinensis]
gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Citrus sinensis]
Length = 2179
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAG 229
K YTLYFMCDSY+GCDQEY+FTVDVKEAG
Sbjct: 2149 KTYTLYFMCDSYMGCDQEYAFTVDVKEAG 2177
>ref|XP_006428571.1| hypothetical protein CICLE_v100108902mg, partial [Citrus
clementina] gi|557530628|gb|ESR41811.1| hypothetical
protein CICLE_v100108902mg, partial [Citrus clementina]
Length = 249
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAG 229
K YTLYFMCDSY+GCDQEY+FTVDVKEAG
Sbjct: 219 KTYTLYFMCDSYMGCDQEYAFTVDVKEAG 247
>ref|XP_007149260.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
gi|593697576|ref|XP_007149261.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022524|gb|ESW21254.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022525|gb|ESW21255.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
Length = 2184
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS*R 205
K+Y LYFMCDSYLGCDQEY FTVDVKEA ++DS R
Sbjct: 2147 KSYALYFMCDSYLGCDQEYGFTVDVKEADGGDEDSGR 2183
>ref|XP_006416344.1| hypothetical protein EUTSA_v10006525mg [Eutrema salsugineum]
gi|557094115|gb|ESQ34697.1| hypothetical protein
EUTSA_v10006525mg [Eutrema salsugineum]
Length = 2160
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAG 229
K+YTLYFMCDSYLGCDQEYSF+VDVKE+G
Sbjct: 2125 KSYTLYFMCDSYLGCDQEYSFSVDVKESG 2153
>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
Length = 1405
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS 211
K+YTLYFMCDSYLGCDQEYSF+VDV +A E+DS
Sbjct: 1371 KSYTLYFMCDSYLGCDQEYSFSVDVMDASGPEEDS 1405
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS 211
K+YTLYFMCDSYLGCDQEYSF+VDV +A E+DS
Sbjct: 2143 KSYTLYFMCDSYLGCDQEYSFSVDVMDASGPEEDS 2177
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS 211
K+YTLYFMCDSYLGCDQEYSF+VDV +A E+DS
Sbjct: 2110 KSYTLYFMCDSYLGCDQEYSFSVDVMDASGPEEDS 2144
>ref|XP_004304804.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Fragaria vesca subsp. vesca]
Length = 2174
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDD 214
K YTLYFMCDSYLGCD+E++FTVDVKEA L +D
Sbjct: 2136 KTYTLYFMCDSYLGCDEEHNFTVDVKEAANLGED 2169
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS*R 205
K+YTLYFMCDSYLGCDQEY+F+VDV EA ++DS R
Sbjct: 2120 KSYTLYFMCDSYLGCDQEYNFSVDVGEAAGPDEDSGR 2156
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 309 YTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS 211
YTLYFMCDSYLGCDQEY+FT+DVKEA EDDS
Sbjct: 2143 YTLYFMCDSYLGCDQEYNFTLDVKEA-MAEDDS 2174
>ref|XP_006295588.1| hypothetical protein CARUB_v10024696mg [Capsella rubella]
gi|482564296|gb|EOA28486.1| hypothetical protein
CARUB_v10024696mg [Capsella rubella]
Length = 2176
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEAGTLED 217
K+YTLYFMCDSY GCDQEYSFTVDVK++ +D
Sbjct: 2140 KSYTLYFMCDSYFGCDQEYSFTVDVKDSDAKDD 2172
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum lycopersicum]
Length = 2174
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 309 YTLYFMCDSYLGCDQEYSFTVDVKEAGTLEDDS 211
YTLYFMCDSYLGCDQEY+FT+DVKEA EDDS
Sbjct: 2143 YTLYFMCDSYLGCDQEYNFTLDVKEA-MAEDDS 2174
>ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [Amborella trichopoda]
gi|548853523|gb|ERN11506.1| hypothetical protein
AMTR_s00022p00114710 [Amborella trichopoda]
Length = 2171
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEA 232
K YTLYFMCDSYLGCDQEY+FT+DVKEA
Sbjct: 2135 KEYTLYFMCDSYLGCDQEYNFTIDVKEA 2162
>ref|XP_002879976.1| hypothetical protein ARALYDRAFT_483318 [Arabidopsis lyrata subsp.
lyrata] gi|297325815|gb|EFH56235.1| hypothetical protein
ARALYDRAFT_483318 [Arabidopsis lyrata subsp. lyrata]
Length = 2168
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEA 232
K+YTLYFMCDSYLGCDQEYSFTVDVK++
Sbjct: 2133 KSYTLYFMCDSYLGCDQEYSFTVDVKDS 2160
>gb|AAL24152.2| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 617
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -3
Query: 315 KAYTLYFMCDSYLGCDQEYSFTVDVKEA 232
K+YTLYFMCDSYLGCDQEYSFTVDVK++
Sbjct: 582 KSYTLYFMCDSYLGCDQEYSFTVDVKDS 609