BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00030735
         (1107 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus...   699   0.0  
gb|EPS67076.1| hypothetical protein M569_07699, partial [Genlise...   698   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   693   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...   689   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...   689   0.0  
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun...   687   0.0  
gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Moru...   687   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...   683   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...   683   0.0  
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...   683   0.0  
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...   683   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...   683   0.0  
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A...   683   0.0  
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su...   679   0.0  
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...   679   0.0  
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   679   0.0  
ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 ...   677   0.0  
ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 ...   677   0.0  
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ...   677   0.0  
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su...   677   0.0  

>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
          Length = 1842

 Score =  699 bits (1803), Expect = 0.0
 Identities = 347/368 (94%), Positives = 360/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYLKP VSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVYLKPDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKIN 
Sbjct: 1176 DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINT 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EF DDLTCIFNDDNAEKLILRIRIMN++APKGE+ DES+EDDVFLKKIEGNMLTEMALRG
Sbjct: 1236 EFSDDLTCIFNDDNAEKLILRIRIMNEQAPKGELADESAEDDVFLKKIEGNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIKN K+NKFDEN+GFKAENEWMLDTEGVNLLAV+CHE+VD RRTTSNHLIEV
Sbjct: 1296 IPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEV 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQLAPIGTGDCAL +NE+MLKQAIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIE 1475

Query: 1082 IPLPSYME 1105
            IPLPSYME
Sbjct: 1476 IPLPSYME 1483


>gb|EPS67076.1| hypothetical protein M569_07699, partial [Genlisea aurea]
          Length = 1171

 Score =  698 bits (1802), Expect = 0.0
 Identities = 346/368 (94%), Positives = 359/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYL    SKTKE+AKNVQCALEYTTLRSVTQATEVWYDP
Sbjct: 469  GVPRLREIINVAKKIKTPSLSVYLNAEASKTKERAKNVQCALEYTTLRSVTQATEVWYDP 528

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTIIEED+EFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 529  DPMSTIIEEDIEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 588

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 589  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRG 648

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIKN KVN+FDE +GFKAENEWMLDTEGVNLLAV+CH DVD++RTTSNHLIEV
Sbjct: 649  IPDINKVFIKNSKVNRFDEIDGFKAENEWMLDTEGVNLLAVLCHPDVDSKRTTSNHLIEV 708

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 709  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 768

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAETD+L+GVTENIMLGQLAPIGTGDCALY+NEEMLKQAIE
Sbjct: 769  PMMRCSFEETVDILLDAAVYAETDHLKGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIE 828

Query: 1082 IPLPSYME 1105
            IPLPSY +
Sbjct: 829  IPLPSYYD 836


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score =  693 bits (1789), Expect = 0.0
 Identities = 343/368 (93%), Positives = 360/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYLKP VSKTKE+AKNVQCALEYTTLRSVTQATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTIIEEDV+FVKSYYEMPDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 1176 DPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINL 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK+GKVNKFDE+EGFK E EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEV
Sbjct: 1296 IPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEV 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLGQLAPIGTGDCALY+N++ML+ AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1476 LQLPSYME 1483


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score =  689 bits (1779), Expect = 0.0
 Identities = 345/368 (93%), Positives = 358/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYLKP V KTKE+AK VQCALEYTTLRSVTQATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMST+IEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 1176 DPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRG 1294

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIKN KV KFD+NEGFKAENEWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEV
Sbjct: 1295 IPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEV 1354

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1355 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1414

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQLAPIGTG C+LY+NEEMLKQAIE
Sbjct: 1415 PMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIE 1474

Query: 1082 IPLPSYME 1105
            IPLPSYME
Sbjct: 1475 IPLPSYME 1482


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score =  689 bits (1777), Expect = 0.0
 Identities = 344/368 (93%), Positives = 358/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYLKP V KTKE+AK VQCALEYTTLRSVTQATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMST+IEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKIN+
Sbjct: 1176 DPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINV 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRG 1294

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIKN KV KFD+NEGFKAENEWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEV
Sbjct: 1295 IPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEV 1354

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1355 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1414

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQLAPIGTG C+LY+NEEMLKQAIE
Sbjct: 1415 PMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIE 1474

Query: 1082 IPLPSYME 1105
            IPLPSYME
Sbjct: 1475 IPLPSYME 1482


>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
            gi|462398589|gb|EMJ04257.1| hypothetical protein
            PRUPE_ppa000093mg [Prunus persica]
          Length = 1844

 Score =  687 bits (1774), Expect = 0.0
 Identities = 337/368 (91%), Positives = 358/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAK+IKTPSLSVYLKP  +KTKE+AKNVQCALEYTTLRSVTQATEVWYDP
Sbjct: 1116 GVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTIIEEDV+FV SYYEMPDEE++PDKISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 1176 DPMSTIIEEDVDFVNSYYEMPDEEVNPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMN EAPKGE+ DES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGELVDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK+GKVNKFD NEGFKAE EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE+
Sbjct: 1296 IPDINKVFIKHGKVNKFDPNEGFKAEQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEI 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            +E+LGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 LEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AETDYLRGVTENIMLGQLAPIGTGDCALY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSYM+
Sbjct: 1476 LQLPSYMD 1483


>gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
          Length = 1866

 Score =  687 bits (1773), Expect = 0.0
 Identities = 337/368 (91%), Positives = 359/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAK+IKTPSLSV+LKP  SKTKE+AK VQCALEYTTLRSVTQATEVWYDP
Sbjct: 1131 GVPRLREIINVAKRIKTPSLSVFLKPEASKTKERAKTVQCALEYTTLRSVTQATEVWYDP 1190

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTII+EDV+FV+SYYEMPDEEI+PDKISPWLLRIELNREMMVDKKLSMADIAEKIN+
Sbjct: 1191 DPMSTIIDEDVDFVRSYYEMPDEEINPDKISPWLLRIELNREMMVDKKLSMADIAEKINV 1250

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++ DE++EDDVFLKKIE NMLTEM+LRG
Sbjct: 1251 EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDLTDEAAEDDVFLKKIESNMLTEMSLRG 1310

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK+GKVNKFDEN+GFK ENEWMLDTEGVNLLAVICHEDVDA+RTTSNHLIEV
Sbjct: 1311 IPDINKVFIKHGKVNKFDENDGFKPENEWMLDTEGVNLLAVICHEDVDAKRTTSNHLIEV 1370

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1371 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1430

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTG CALY+N+EMLK AIE
Sbjct: 1431 PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIE 1490

Query: 1082 IPLPSYME 1105
            + LPSYM+
Sbjct: 1491 LQLPSYMD 1498


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score =  683 bits (1762), Expect = 0.0
 Identities = 334/368 (90%), Positives = 357/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSV+LKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN 
Sbjct: 1176 DPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQ 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+
Sbjct: 1296 IPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEI 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1476 LQLPSYME 1483


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score =  683 bits (1762), Expect = 0.0
 Identities = 334/368 (90%), Positives = 357/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSV+LKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN 
Sbjct: 1176 DPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQ 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+
Sbjct: 1296 IPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEI 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1476 LQLPSYME 1483


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score =  683 bits (1762), Expect = 0.0
 Identities = 334/368 (90%), Positives = 357/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSV+LKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN 
Sbjct: 1176 DPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQ 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+
Sbjct: 1296 IPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEI 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1476 LQLPSYME 1483


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score =  683 bits (1762), Expect = 0.0
 Identities = 334/368 (90%), Positives = 357/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSV+LKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN 
Sbjct: 1176 DPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQ 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+
Sbjct: 1296 IPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEI 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1476 LQLPSYME 1483


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score =  683 bits (1762), Expect = 0.0
 Identities = 334/368 (90%), Positives = 357/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSV+LKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDP
Sbjct: 1116 GVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN 
Sbjct: 1176 DPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQ 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+
Sbjct: 1296 IPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEI 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1476 LQLPSYME 1483


>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
            gi|548833823|gb|ERM96260.1| hypothetical protein
            AMTR_s00001p00152770 [Amborella trichopoda]
          Length = 1844

 Score =  683 bits (1762), Expect = 0.0
 Identities = 338/368 (91%), Positives = 358/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYLK  V+KTKEKAKNVQCALEYTTLRSVT+ATEVWYDP
Sbjct: 1119 GVPRLREIINVAKKIKTPSLSVYLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDP 1178

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTIIEEDV+FV+SYYEMPDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 1179 DPMSTIIEEDVDFVRSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINL 1238

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DESSEDDVFLKKIE NMLTEMALRG
Sbjct: 1239 EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRG 1298

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK+GK+NKFDENEGFK E EWMLDTEGVNLLAV+C+E+VDA RTTSNHLIEV
Sbjct: 1299 IPDINKVFIKSGKINKFDENEGFKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEV 1358

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            I+VLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1359 IQVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1418

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAE D+LRGVTENIMLGQLAPIGTGDCALY+N++ML+QAIE
Sbjct: 1419 PMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIE 1478

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1479 LQLPSYME 1486


>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
            vesca subsp. vesca]
          Length = 1842

 Score =  679 bits (1752), Expect = 0.0
 Identities = 330/368 (89%), Positives = 358/368 (97%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAK+IKTPSLSVYLKP  +KTKE+AKNVQCALEYTTLRSVTQATEVWYDP
Sbjct: 1114 GVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDP 1173

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMST+IEED++FV+SYYEMPDEE++PDKISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 1174 DPMSTLIEEDLDFVRSYYEMPDEEVNPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 1233

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFD DLTCIFNDDNAEKLILRIRIMN+E PKG+  DES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1234 EFDGDLTCIFNDDNAEKLILRIRIMNEETPKGDSQDESAEDDVFLKKIESNMLTEMALRG 1293

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK+GKVNKFD+NEGFKAE EWMLDTEGVNLLAV+CH+DVDA+RTTSNHLIE+
Sbjct: 1294 IPDINKVFIKHGKVNKFDQNEGFKAEQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHLIEI 1353

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1354 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1413

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDA+V+AETD+LRGVTENIMLGQLAPIGTGDCALY+N+EMLK AIE
Sbjct: 1414 PMMRCSFEETVDILLDASVFAETDHLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIE 1473

Query: 1082 IPLPSYME 1105
            + LPSY++
Sbjct: 1474 LQLPSYVD 1481


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score =  679 bits (1751), Expect = 0.0
 Identities = 337/368 (91%), Positives = 355/368 (96%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAK+IKTPSLSVYLKP  +KTKE+AK VQCALEYTTLRSVTQATEVWYDP
Sbjct: 1116 GVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTIIEED++FVKSYYEMPDEEI P+KISPWLLRIELNREMMVDKKLSMA+IAEKINL
Sbjct: 1176 DPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINL 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK GKVNKFDENEGFK E EWMLDTEGVNLLAV+ HEDVDARRTTSNHLIEV
Sbjct: 1296 IPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEV 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLGQLAPIGTG CALY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSY++
Sbjct: 1476 LQLPSYID 1483


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score =  679 bits (1751), Expect = 0.0
 Identities = 337/368 (91%), Positives = 355/368 (96%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAK+IKTPSLSVYLKP  +KTKE+AK VQCALEYTTLRSVTQATEVWYDP
Sbjct: 1116 GVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTIIEED++FVKSYYEMPDEEI P+KISPWLLRIELNREMMVDKKLSMA+IAEKINL
Sbjct: 1176 DPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINL 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1236 EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK GKVNKFDENEGFK E EWMLDTEGVNLLAV+ HEDVDARRTTSNHLIEV
Sbjct: 1296 IPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEV 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLGQLAPIGTG CALY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSY++
Sbjct: 1476 LQLPSYID 1483


>ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 isoform 5 [Theobroma
            cacao] gi|508698849|gb|EOX90745.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 5 [Theobroma cacao]
          Length = 1512

 Score =  677 bits (1748), Expect = 0.0
 Identities = 334/368 (90%), Positives = 352/368 (95%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYL P  SKTKEKAKNVQCALEYTTLRSVT ATEVWYDP
Sbjct: 767  GVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDP 826

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DP STIIEED++FVKSYYEMPDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 827  DPTSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINL 886

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDE PKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 887  EFDDDLTCIFNDDNAEKLILRIRIMNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRG 946

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK+ K +KFDE +G+K   EW+LDTEGVNLLAV+CHEDVDARRTTSNHLIEV
Sbjct: 947  IPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEV 1006

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1007 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1066

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAE+DYLRGVTENIMLGQLAPIGTGDCALY+N+EMLK AIE
Sbjct: 1067 PMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIE 1126

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1127 LQLPSYME 1134


>ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 isoform 4 [Theobroma
            cacao] gi|508698848|gb|EOX90744.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 4 [Theobroma cacao]
          Length = 1511

 Score =  677 bits (1748), Expect = 0.0
 Identities = 334/368 (90%), Positives = 352/368 (95%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYL P  SKTKEKAKNVQCALEYTTLRSVT ATEVWYDP
Sbjct: 767  GVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDP 826

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DP STIIEED++FVKSYYEMPDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 827  DPTSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINL 886

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDE PKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 887  EFDDDLTCIFNDDNAEKLILRIRIMNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRG 946

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK+ K +KFDE +G+K   EW+LDTEGVNLLAV+CHEDVDARRTTSNHLIEV
Sbjct: 947  IPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEV 1006

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1007 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1066

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAE+DYLRGVTENIMLGQLAPIGTGDCALY+N+EMLK AIE
Sbjct: 1067 PMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIE 1126

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1127 LQLPSYME 1134


>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
            cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|590702285|ref|XP_007046586.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
          Length = 1861

 Score =  677 bits (1748), Expect = 0.0
 Identities = 334/368 (90%), Positives = 352/368 (95%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAKKIKTPSLSVYL P  SKTKEKAKNVQCALEYTTLRSVT ATEVWYDP
Sbjct: 1117 GVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDP 1176

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DP STIIEED++FVKSYYEMPDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 1177 DPTSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINL 1236

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDE PKGE+NDES+EDDVFLKKIE NMLTEMALRG
Sbjct: 1237 EFDDDLTCIFNDDNAEKLILRIRIMNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRG 1296

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIK+ K +KFDE +G+K   EW+LDTEGVNLLAV+CHEDVDARRTTSNHLIEV
Sbjct: 1297 IPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEV 1356

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1357 IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1416

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAE+DYLRGVTENIMLGQLAPIGTGDCALY+N+EMLK AIE
Sbjct: 1417 PMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIE 1476

Query: 1082 IPLPSYME 1105
            + LPSYME
Sbjct: 1477 LQLPSYME 1484


>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Glycine max] gi|571435633|ref|XP_006573537.1| PREDICTED:
            DNA-directed RNA polymerase II subunit 1-like isoform X2
            [Glycine max]
          Length = 1827

 Score =  677 bits (1747), Expect = 0.0
 Identities = 335/368 (91%), Positives = 352/368 (95%)
 Frame = +2

Query: 2    GVPRLREIINVAKKIKTPSLSVYLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDP 181
            GVPRLREIINVAK+IKTPSLSVYL+P V KTKE+AK+VQCALEYTTLRSVTQATEVWYDP
Sbjct: 1116 GVPRLREIINVAKRIKTPSLSVYLRPDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDP 1175

Query: 182  DPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINL 361
            DPMSTIIEEDV+FVKSYYEMPDEE+  +KISPWLLRIELNREMMVDKKLSMADIAEKINL
Sbjct: 1176 DPMSTIIEEDVDFVKSYYEMPDEEVALEKISPWLLRIELNREMMVDKKLSMADIAEKINL 1235

Query: 362  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRG 541
            EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEM LRG
Sbjct: 1236 EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRG 1295

Query: 542  IPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEV 721
            IPDINKVFIKN KV KFDEN+GFK   EWMLDTEGVNLLAV+CHEDVD  RTTSNHLIEV
Sbjct: 1296 IPDINKVFIKNTKVQKFDENQGFKPNEEWMLDTEGVNLLAVMCHEDVDVTRTTSNHLIEV 1355

Query: 722  IEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 901
            IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG
Sbjct: 1356 IEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTG 1415

Query: 902  PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIE 1081
            PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTG+CALY+N+EMLK AIE
Sbjct: 1416 PMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIE 1475

Query: 1082 IPLPSYME 1105
            + LPSYM+
Sbjct: 1476 LQLPSYMD 1483