BLASTX nr result
ID: Mentha24_contig00030728
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha24_contig00030728 (403 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU30230.1| hypothetical protein MIMGU_mgv1a0034531mg, partia... 123 2e-26 ref|XP_006378422.1| hypothetical protein POPTR_0010s10950g [Popu... 59 7e-07 ref|XP_002521878.1| nucleic acid binding protein, putative [Rici... 57 3e-06 >gb|EYU30230.1| hypothetical protein MIMGU_mgv1a0034531mg, partial [Mimulus guttatus] Length = 388 Score = 123 bits (309), Expect = 2e-26 Identities = 75/146 (51%), Positives = 85/146 (58%), Gaps = 14/146 (9%) Frame = -2 Query: 402 RLGNGSRPGSQFETLMSPGFRPS------PRPLFXXXXXXXXXXXDQSSH--GMMQNKPS 247 RLG GSRPG QFETL+ GFRP+ P P H GM+ NK S Sbjct: 70 RLGGGSRPGPQFETLVGSGFRPARSSLPPPSPALYSLQQQSNEEDHHQQHNNGMLSNKAS 129 Query: 246 ----LQGLMQLPQLHMXXXXXXXXSPSGAGLFNLSFFPGNSNAATMDGGGSHHSAAGED- 82 L GLMQLPQLH + S AGLFNLSFFP ++ A + G HHS G D Sbjct: 130 SSTQLHGLMQLPQLHNNAANNSTSNSSTAGLFNLSFFPPGNSVAASNIDGGHHSGGGGDQ 189 Query: 81 -STLFSSGNLMSIAIPSLYSSSHAMQ 7 STLFSSGNLMS+AIPSLYS+SHA+Q Sbjct: 190 ESTLFSSGNLMSMAIPSLYSTSHAIQ 215 >ref|XP_006378422.1| hypothetical protein POPTR_0010s10950g [Populus trichocarpa] gi|550329544|gb|ERP56219.1| hypothetical protein POPTR_0010s10950g [Populus trichocarpa] Length = 612 Score = 58.9 bits (141), Expect = 7e-07 Identities = 50/162 (30%), Positives = 68/162 (41%), Gaps = 34/162 (20%) Frame = -2 Query: 402 RLGNGSRPGSQFETLM-----SPGFRPS---PRP-LFXXXXXXXXXXXDQSSHGMMQNKP 250 RLG G QF+ L+ S FRP P P F +QS ++QNKP Sbjct: 249 RLGGGGARTGQFDHLLPSSIGSSSFRPPQQMPSPAFFMQEPNQNYHDENQSQQDLLQNKP 308 Query: 249 SLQGLMQLPQLHMXXXXXXXXSPSGAGLFNLSFFPGNSNAATMDGGGSHHSA-------- 94 GLMQ +H PS LFNLSF +S A+++ + +++ Sbjct: 309 FHHGLMQFADIH----NTTGNPPSAGNLFNLSFLSNSSTASSISNSNNANNSNSNLPTSG 364 Query: 93 --------------AGEDSTLFSS---GNLMSIAIPSLYSSS 19 GE S +FS+ GN M+ +PSLYSSS Sbjct: 365 LLMPSHFNNQNGVGGGEGSNIFSNNVMGNQMTSGVPSLYSSS 406 >ref|XP_002521878.1| nucleic acid binding protein, putative [Ricinus communis] gi|223538916|gb|EEF40514.1| nucleic acid binding protein, putative [Ricinus communis] Length = 589 Score = 57.0 bits (136), Expect = 3e-06 Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 35/163 (21%) Frame = -2 Query: 402 RLGNGSRPGSQFETLM------SPGFRPSP-RPL-----FXXXXXXXXXXXDQSSHGMMQ 259 RLG GSR G QF+ L+ S FRPSP +P+ F Q+ G++Q Sbjct: 247 RLGGGSRTG-QFDHLLPSSMGGSVSFRPSPPQPMPSPAFFMQEPNQNYHDEHQAQQGLLQ 305 Query: 258 NKPSLQGLMQLPQLHMXXXXXXXXSPSGAGLFNLSFFPGNSNAATMDGGGSHH------- 100 NKP GLMQ +LH +P + +FNLSF +S +++ + + Sbjct: 306 NKPFHHGLMQFAELH----NTTNTNPPASNIFNLSFLSNSSTTSSITNSNNANNSNNSLL 361 Query: 99 -----------SAAGEDSTLFSS-----GNLMSIAIPSLYSSS 19 S G+ ST+FS+ + M+ +PSL++SS Sbjct: 362 MSNQFSNQNGASGGGDGSTMFSNHIMGDHHQMNSGVPSLFTSS 404