BLASTX nr result

ID: Mentha24_contig00030728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00030728
         (403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30230.1| hypothetical protein MIMGU_mgv1a0034531mg, partia...   123   2e-26
ref|XP_006378422.1| hypothetical protein POPTR_0010s10950g [Popu...    59   7e-07
ref|XP_002521878.1| nucleic acid binding protein, putative [Rici...    57   3e-06

>gb|EYU30230.1| hypothetical protein MIMGU_mgv1a0034531mg, partial [Mimulus
           guttatus]
          Length = 388

 Score =  123 bits (309), Expect = 2e-26
 Identities = 75/146 (51%), Positives = 85/146 (58%), Gaps = 14/146 (9%)
 Frame = -2

Query: 402 RLGNGSRPGSQFETLMSPGFRPS------PRPLFXXXXXXXXXXXDQSSH--GMMQNKPS 247
           RLG GSRPG QFETL+  GFRP+      P P                 H  GM+ NK S
Sbjct: 70  RLGGGSRPGPQFETLVGSGFRPARSSLPPPSPALYSLQQQSNEEDHHQQHNNGMLSNKAS 129

Query: 246 ----LQGLMQLPQLHMXXXXXXXXSPSGAGLFNLSFFPGNSNAATMDGGGSHHSAAGED- 82
               L GLMQLPQLH         + S AGLFNLSFFP  ++ A  +  G HHS  G D 
Sbjct: 130 SSTQLHGLMQLPQLHNNAANNSTSNSSTAGLFNLSFFPPGNSVAASNIDGGHHSGGGGDQ 189

Query: 81  -STLFSSGNLMSIAIPSLYSSSHAMQ 7
            STLFSSGNLMS+AIPSLYS+SHA+Q
Sbjct: 190 ESTLFSSGNLMSMAIPSLYSTSHAIQ 215


>ref|XP_006378422.1| hypothetical protein POPTR_0010s10950g [Populus trichocarpa]
           gi|550329544|gb|ERP56219.1| hypothetical protein
           POPTR_0010s10950g [Populus trichocarpa]
          Length = 612

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 50/162 (30%), Positives = 68/162 (41%), Gaps = 34/162 (20%)
 Frame = -2

Query: 402 RLGNGSRPGSQFETLM-----SPGFRPS---PRP-LFXXXXXXXXXXXDQSSHGMMQNKP 250
           RLG G     QF+ L+     S  FRP    P P  F           +QS   ++QNKP
Sbjct: 249 RLGGGGARTGQFDHLLPSSIGSSSFRPPQQMPSPAFFMQEPNQNYHDENQSQQDLLQNKP 308

Query: 249 SLQGLMQLPQLHMXXXXXXXXSPSGAGLFNLSFFPGNSNAATMDGGGSHHSA-------- 94
              GLMQ   +H          PS   LFNLSF   +S A+++    + +++        
Sbjct: 309 FHHGLMQFADIH----NTTGNPPSAGNLFNLSFLSNSSTASSISNSNNANNSNSNLPTSG 364

Query: 93  --------------AGEDSTLFSS---GNLMSIAIPSLYSSS 19
                          GE S +FS+   GN M+  +PSLYSSS
Sbjct: 365 LLMPSHFNNQNGVGGGEGSNIFSNNVMGNQMTSGVPSLYSSS 406


>ref|XP_002521878.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538916|gb|EEF40514.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 589

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 35/163 (21%)
 Frame = -2

Query: 402 RLGNGSRPGSQFETLM------SPGFRPSP-RPL-----FXXXXXXXXXXXDQSSHGMMQ 259
           RLG GSR G QF+ L+      S  FRPSP +P+     F            Q+  G++Q
Sbjct: 247 RLGGGSRTG-QFDHLLPSSMGGSVSFRPSPPQPMPSPAFFMQEPNQNYHDEHQAQQGLLQ 305

Query: 258 NKPSLQGLMQLPQLHMXXXXXXXXSPSGAGLFNLSFFPGNSNAATMDGGGSHH------- 100
           NKP   GLMQ  +LH         +P  + +FNLSF   +S  +++    + +       
Sbjct: 306 NKPFHHGLMQFAELH----NTTNTNPPASNIFNLSFLSNSSTTSSITNSNNANNSNNSLL 361

Query: 99  -----------SAAGEDSTLFSS-----GNLMSIAIPSLYSSS 19
                      S  G+ ST+FS+      + M+  +PSL++SS
Sbjct: 362 MSNQFSNQNGASGGGDGSTMFSNHIMGDHHQMNSGVPSLFTSS 404


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