BLASTX nr result

ID: Mentha24_contig00030341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00030341
         (597 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25652.3| unnamed protein product [Vitis vinifera]               69   1e-09
emb|CBI25651.3| unnamed protein product [Vitis vinifera]               69   1e-09
ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I...    69   1e-09
ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, ...    67   5e-09
gb|EYU26259.1| hypothetical protein MIMGU_mgv1a017602mg [Mimulus...    65   1e-08
ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutr...    64   3e-08
ref|XP_007023679.1| DNA directed RNA polymerase, 7 kDa subunit [...    64   3e-08
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I...    64   4e-08
ref|XP_002527516.1| DNA-directed RNA polymerases I, II, and III ...    64   4e-08
ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE1...    62   2e-07
ref|XP_002264322.1| PREDICTED: DNA-directed RNA polymerases I, I...    62   2e-07
ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutr...    61   2e-07
ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, part...    61   3e-07
ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, I...    61   3e-07
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ...    61   3e-07
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp....    61   3e-07
gb|EEE62363.1| hypothetical protein OsJ_17152 [Oryza sativa Japo...    61   3e-07
gb|EEC78536.1| hypothetical protein OsI_18488 [Oryza sativa Indi...    61   3e-07
gb|ACG30756.1| DNA-directed RNA polymerases I, II, and III 7.3 k...    61   3e-07
ref|NP_001172391.1| Os01g0530366 [Oryza sativa Japonica Group] g...    61   3e-07

>emb|CBI25652.3| unnamed protein product [Vitis vinifera]
          Length = 40

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPVSYICGDCGQENTLKPGDVIQ RE
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKPGDVIQCRE 31


>emb|CBI25651.3| unnamed protein product [Vitis vinifera]
          Length = 82

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPVSYICGDCGQENTLKPGDVIQ RE
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKPGDVIQCRE 31


>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Vitis vinifera]
           gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4 [Vitis
           vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
           product [Vitis vinifera]
          Length = 51

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPVSYICGDCGQENTLKPGDVIQ RE
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKPGDVIQCRE 31


>ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           12-like [Glycine max] gi|356560019|ref|XP_003548293.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 12 [Glycine max]
           gi|567912183|ref|XP_006448405.1| hypothetical protein
           CICLE_v10017429mg [Citrus clementina]
           gi|593704333|ref|XP_007152540.1| hypothetical protein
           PHAVU_004G138700g [Phaseolus vulgaris]
           gi|255630274|gb|ACU15492.1| unknown [Glycine max]
           gi|557551016|gb|ESR61645.1| hypothetical protein
           CICLE_v10017429mg [Citrus clementina]
           gi|561025849|gb|ESW24534.1| hypothetical protein
           PHAVU_004G138700g [Phaseolus vulgaris]
          Length = 51

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPVSYICGDCG ENTLKPGDVIQ RE
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKPGDVIQCRE 31


>gb|EYU26259.1| hypothetical protein MIMGU_mgv1a017602mg [Mimulus guttatus]
           gi|604334021|gb|EYU38219.1| hypothetical protein
           MIMGU_mgv1a017594mg [Mimulus guttatus]
          Length = 51

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPVSYICGDCGQENTLK GDVIQ RE
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKQGDVIQCRE 31


>ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutrema salsugineum]
           gi|567131670|ref|XP_006392764.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|567131674|ref|XP_006392765.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|557089341|gb|ESQ30049.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|557089342|gb|ESQ30050.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|557089343|gb|ESQ30051.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
          Length = 51

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPV+Y+CGDCGQENTLK GDVIQ RE
Sbjct: 1   MDPQPEPVTYVCGDCGQENTLKSGDVIQCRE 31


>ref|XP_007023679.1| DNA directed RNA polymerase, 7 kDa subunit [Theobroma cacao]
           gi|508779045|gb|EOY26301.1| DNA directed RNA polymerase,
           7 kDa subunit [Theobroma cacao]
          Length = 51

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPV+YICGDCGQENTLK GDVIQ RE
Sbjct: 1   MDPQPEPVTYICGDCGQENTLKHGDVIQCRE 31


>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Cucumis sativus]
           gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Cucumis sativus]
          Length = 51

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPVSYICGDCG ENTLK GDVIQ RE
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKQGDVIQCRE 31


>ref|XP_002527516.1| DNA-directed RNA polymerases I, II, and III 7.0 kDa polypeptide,
           putative [Ricinus communis] gi|223533156|gb|EEF34914.1|
           DNA-directed RNA polymerases I, II, and III 7.0 kDa
           polypeptide, putative [Ricinus communis]
          Length = 51

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQPEPVSYICGDCG ENTLK GDVIQ RE
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKQGDVIQCRE 31


>ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE12 [Arabidopsis
           thaliana] gi|75171496|sp|Q9FLM8.1|NRPBC_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           12; AltName: Full=DNA-directed RNA Polymerase II subunit
           K gi|9759147|dbj|BAB09703.1| unnamed protein product
           [Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
           unknown protein [Arabidopsis thaliana]
           gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
           thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
           polymerase II polypeptide K [Arabidopsis thaliana]
           gi|332007242|gb|AED94625.1| DNA-directed RNA polymerase
           NRPB12/NRPD12/NRPE12 [Arabidopsis thaliana]
          Length = 51

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDP PEPV+Y+CGDCGQENTLK GDVIQ RE
Sbjct: 1   MDPAPEPVTYVCGDCGQENTLKSGDVIQCRE 31


>ref|XP_002264322.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4 isoform 2 [Vitis vinifera]
           gi|298204812|emb|CBI25645.3| unnamed protein product
           [Vitis vinifera]
          Length = 51

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MD QPEPVSYICGDCGQENTLK GDVIQ RE
Sbjct: 1   MDSQPEPVSYICGDCGQENTLKLGDVIQCRE 31


>ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutrema salsugineum]
           gi|557106544|gb|ESQ46859.1| hypothetical protein
           EUTSA_v10028022mg [Eutrema salsugineum]
          Length = 51

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +1

Query: 388 MDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDP PEPV+Y+CGDCGQENTLK GDVIQ RE
Sbjct: 1   MDPLPEPVTYVCGDCGQENTLKSGDVIQCRE 31


>ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, partial [Capsella rubella]
           gi|482553592|gb|EOA17785.1| hypothetical protein
           CARUB_v10006178mg, partial [Capsella rubella]
          Length = 68

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +1

Query: 379 STKMDPQPEPVSYICGDCGQENTLKPGDVIQRRE 480
           +T   P PEPV+Y+CGDCGQENTLKPGDVIQ RE
Sbjct: 15  NTMDQPLPEPVTYVCGDCGQENTLKPGDVIQCRE 48


>ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Solanum lycopersicum]
          Length = 52

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 29/32 (90%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = +1

Query: 388 MDPQP-EPVSYICGDCGQENTLKPGDVIQRRE 480
           MD QP EPVSYICGDCGQENTLKPGDVIQ RE
Sbjct: 1   MDSQPVEPVSYICGDCGQENTLKPGDVIQCRE 32


>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
           1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
           DNA-directed RNA polymerase I, II, and III polypeptide
           isoform 2, partial [Zea mays]
          Length = 100

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = +1

Query: 388 MDPQ-PEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQ PEPVSY+CGDCG ENTLKPGDVIQ RE
Sbjct: 49  MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRE 80


>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316495|gb|EFH46918.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 52

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 27/32 (84%), Positives = 30/32 (93%), Gaps = 1/32 (3%)
 Frame = +1

Query: 388 MDP-QPEPVSYICGDCGQENTLKPGDVIQRRE 480
           M+P QPEPV+Y+CGDCGQENTLKPGDVIQ RE
Sbjct: 1   MEPAQPEPVTYVCGDCGQENTLKPGDVIQCRE 32


>gb|EEE62363.1| hypothetical protein OsJ_17152 [Oryza sativa Japonica Group]
          Length = 50

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = +1

Query: 388 MDPQ-PEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQ PEPVSY+CGDCG ENTLKPGDVIQ RE
Sbjct: 1   MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRE 32


>gb|EEC78536.1| hypothetical protein OsI_18488 [Oryza sativa Indica Group]
          Length = 87

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = +1

Query: 388 MDPQ-PEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQ PEPVSY+CGDCG ENTLKPGDVIQ RE
Sbjct: 1   MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRE 32


>gb|ACG30756.1| DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide
           [Zea mays]
          Length = 52

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = +1

Query: 388 MDPQ-PEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQ PEPVSY+CGDCG ENTLKPGDVIQ RE
Sbjct: 1   MDPQQPEPVSYLCGDCGAENTLKPGDVIQWRE 32


>ref|NP_001172391.1| Os01g0530366 [Oryza sativa Japonica Group]
           gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
           sativa Japonica Group] gi|615276275|ref|NP_001278509.1|
           LOC100285004 [Zea mays] gi|242048352|ref|XP_002461922.1|
           hypothetical protein SORBIDRAFT_02g010660 [Sorghum
           bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
           protein SORBIDRAFT_07g005435 [Sorghum bicolor]
           gi|514726952|ref|XP_004956106.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Setaria italica] gi|195609858|gb|ACG26759.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195620974|gb|ACG32317.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195645780|gb|ACG42358.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195646246|gb|ACG42591.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|218188380|gb|EEC70807.1|
           hypothetical protein OsI_02267 [Oryza sativa Indica
           Group] gi|222618595|gb|EEE54727.1| hypothetical protein
           OsJ_02072 [Oryza sativa Japonica Group]
           gi|241925299|gb|EER98443.1| hypothetical protein
           SORBIDRAFT_02g010660 [Sorghum bicolor]
           gi|241940338|gb|EES13483.1| hypothetical protein
           SORBIDRAFT_07g005435 [Sorghum bicolor]
           gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
           Japonica Group] gi|255676033|dbj|BAH92949.1|
           Os05g0151800 [Oryza sativa Japonica Group]
          Length = 52

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = +1

Query: 388 MDPQ-PEPVSYICGDCGQENTLKPGDVIQRRE 480
           MDPQ PEPVSY+CGDCG ENTLKPGDVIQ RE
Sbjct: 1   MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRE 32


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