BLASTX nr result

ID: Mentha24_contig00030013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00030013
         (384 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352157.1| PREDICTED: proteinaceous RNase P 1, chloropl...    74   2e-11
ref|XP_006352156.1| PREDICTED: proteinaceous RNase P 1, chloropl...    74   2e-11
emb|CBI28050.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_004242933.1| PREDICTED: proteinaceous RNase P 1, chloropl...    62   6e-08
ref|XP_007160328.1| hypothetical protein PHAVU_002G312300g [Phas...    58   1e-06
ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06

>ref|XP_006352157.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X2 [Solanum
           tuberosum]
          Length = 753

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 47/127 (37%), Positives = 67/127 (52%)
 Frame = -3

Query: 382 SAAAGVVQPAKSGSRTRTLXXXXXXXXXXXXXDIVEMVNCKSFSLIDGDEGLSSYGNGAL 203
           SAA G++ PAKSGS +RTL                   N   F++ID D  L        
Sbjct: 179 SAATGLIHPAKSGSGSRTLNAPNEPSSHN---------NSNEFNVIDHDSHL-------- 221

Query: 202 DISGLSLDSLVQSMKKSADNSNSKNERSRSDGIQVNKEMKRVALKKGFEIYKEMGLEKVP 23
            +   ++D  VQ MK SA   N ++ R    GI+V+++++  AL +GFEIY++M  +KV 
Sbjct: 222 -LGSSTVDEFVQFMKSSAKRCNLQSVRHDDSGIKVSEDVRHYALTRGFEIYEKMLSDKVQ 280

Query: 22  MNEATFT 2
           MNEAT T
Sbjct: 281 MNEATLT 287


>ref|XP_006352156.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X1 [Solanum
           tuberosum]
          Length = 782

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 47/127 (37%), Positives = 67/127 (52%)
 Frame = -3

Query: 382 SAAAGVVQPAKSGSRTRTLXXXXXXXXXXXXXDIVEMVNCKSFSLIDGDEGLSSYGNGAL 203
           SAA G++ PAKSGS +RTL                   N   F++ID D  L        
Sbjct: 179 SAATGLIHPAKSGSGSRTLNAPNEPSSHN---------NSNEFNVIDHDSHL-------- 221

Query: 202 DISGLSLDSLVQSMKKSADNSNSKNERSRSDGIQVNKEMKRVALKKGFEIYKEMGLEKVP 23
            +   ++D  VQ MK SA   N ++ R    GI+V+++++  AL +GFEIY++M  +KV 
Sbjct: 222 -LGSSTVDEFVQFMKSSAKRCNLQSVRHDDSGIKVSEDVRHYALTRGFEIYEKMLSDKVQ 280

Query: 22  MNEATFT 2
           MNEAT T
Sbjct: 281 MNEATLT 287


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 47/127 (37%), Positives = 67/127 (52%)
 Frame = -3

Query: 382 SAAAGVVQPAKSGSRTRTLXXXXXXXXXXXXXDIVEMVNCKSFSLIDGDEGLSSYGNGAL 203
           SAA GV++PAKSG+ +RT               I EM            + LS   N   
Sbjct: 163 SAALGVIRPAKSGTGSRTFEVAKDDLDGS----ITEM------------DKLSQVSN-CF 205

Query: 202 DISGLSLDSLVQSMKKSADNSNSKNERSRSDGIQVNKEMKRVALKKGFEIYKEMGLEKVP 23
           + S   L      ++K  D+S +K E +    I+V+++ K+ AL++GFEIY++M LEKVP
Sbjct: 206 NQSNSQLLEGQMHLRKGVDDSTNKKEDNE---IRVSEDFKKYALRRGFEIYEKMCLEKVP 262

Query: 22  MNEATFT 2
           MNEAT T
Sbjct: 263 MNEATLT 269


>ref|XP_004242933.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 768

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
 Frame = -3

Query: 382 SAAAGVVQPAKSGSRTRTLXXXXXXXXXXXXXDIVEMVNCKSFSL----IDGDEGLSSYG 215
           SAA G++ PAKSGS  RTL                   N + FSL    I+ D  L    
Sbjct: 173 SAATGLIHPAKSGSVNRTLNAP----------------NEQEFSLNDKVIEHDSHL---- 212

Query: 214 NGALDISGLSLDSLVQSMKKSADNSNSKNERSRSDGIQVNKEMKRVALKKGFEIYKEMGL 35
                +S  ++D  VQ MK SA     K+ R   +GI+V+++++  AL +GFEIY++M  
Sbjct: 213 -----LSSSTVDEFVQFMKSSA-----KSVRHDDNGIKVSEDVRHYALTRGFEIYEKMLS 262

Query: 34  EKVPMNEATFT 2
           +KV +NEAT T
Sbjct: 263 DKVQINEATLT 273


>ref|XP_007160328.1| hypothetical protein PHAVU_002G312300g [Phaseolus vulgaris]
           gi|561033743|gb|ESW32322.1| hypothetical protein
           PHAVU_002G312300g [Phaseolus vulgaris]
          Length = 740

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/127 (30%), Positives = 64/127 (50%)
 Frame = -3

Query: 382 SAAAGVVQPAKSGSRTRTLXXXXXXXXXXXXXDIVEMVNCKSFSLIDGDEGLSSYGNGAL 203
           SAA GVV+PAKSG+  RTL                        + +  D  L+   +G +
Sbjct: 161 SAAVGVVRPAKSGNGARTLN-----------------------ARVSSDGVLNEGFSGPM 197

Query: 202 DISGLSLDSLVQSMKKSADNSNSKNERSRSDGIQVNKEMKRVALKKGFEIYKEMGLEKVP 23
           D +  S +     +  +A+ ++  +   +  G  V++E+KR AL++GFE+Y+ M ++KV 
Sbjct: 198 DTNDSSFE-----LDCNAELNSDLSSSEKDGGFLVSEEVKRYALERGFEVYQNMCVDKVE 252

Query: 22  MNEATFT 2
           MNEA  T
Sbjct: 253 MNEAALT 259


>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/54 (50%), Positives = 41/54 (75%)
 Frame = -3

Query: 163 MKKSADNSNSKNERSRSDGIQVNKEMKRVALKKGFEIYKEMGLEKVPMNEATFT 2
           ++K  D+S +K E +    I+V+++ K+ AL++GFEIY++M LEKVPMNEAT T
Sbjct: 284 LRKGVDDSTNKKEDNE---IRVSEDFKKYALRRGFEIYEKMCLEKVPMNEATLT 334


Top