BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00029517
         (832 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g...   273   7e-71
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]   271   2e-70
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g...   271   3e-70
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g...   268   1e-69
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ...   263   6e-68
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr...   260   4e-67
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr...   260   4e-67
gb|AEV43362.1| poly C-binding protein [Citrus sinensis]               259   9e-67
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g...   259   1e-66
ref|XP_007217649.1| hypothetical protein PRUPE_ppa027198mg, part...   250   5e-64
ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Popu...   249   1e-63
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g...   248   2e-63
ref|XP_007033280.1| RNA-binding KH domain-containing protein iso...   231   2e-58
ref|XP_007033279.1| RNA-binding KH domain-containing protein iso...   231   2e-58
ref|XP_007033277.1| RNA-binding KH domain-containing protein iso...   231   2e-58
ref|XP_007033276.1| RNA-binding KH domain-containing protein iso...   231   2e-58
ref|XP_004306018.1| PREDICTED: KH domain-containing protein At4g...   207   3e-51
ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g...   187   4e-45
ref|XP_004982741.1| PREDICTED: KH domain-containing protein At4g...   177   3e-42
ref|XP_004982740.1| PREDICTED: KH domain-containing protein At4g...   177   3e-42

>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
           product [Vitis vinifera]
          Length = 676

 Score =  273 bits (697), Expect = 7e-71
 Identities = 147/249 (59%), Positives = 178/249 (71%), Gaps = 2/249 (0%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXX 564
           MEG RR    K  N QFK+    ++G  ++S  E+   NS  +DTVYRI+C         
Sbjct: 1   MEGTRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVI 60

Query: 563 XXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVL 384
                  KALREETQAKITV+DSVPGSDERVI I S   K  K   + +  ++E + D +
Sbjct: 61  GKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDHM 120

Query: 383 EPHCAAQDALLKVHDRIVQED-FGGAEKSHGSE-TVVSARLLVSNHMVGCLLGRKGDVIQ 210
           EPHC AQDAL+KVH+RI++ED FGG E    +E TVV+ARLLV N+MVGCLLG++GDVIQ
Sbjct: 121 EPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQ 180

Query: 209 RLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSL 30
           RLRSETGANIRVLPAEHLP CAMS+DELVQ+SG+PA+AKKAL+EV+TLLHQN  KDKP  
Sbjct: 181 RLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPS 240

Query: 29  SHPASYDRQ 3
           S P S+  Q
Sbjct: 241 SFPMSFGGQ 249



 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
 Frame = -3

Query: 536 LREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVL-EPHCAAQD 360
           L++ET A I V D++  S+ERVI +SS                    ++ L  P     +
Sbjct: 339 LQQETGASIHVEDALAESEERVIRVSS--------------------FEALWNPRSQTIE 378

Query: 359 ALLKVHDRIVQ-EDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVIQRLRSETGAN 183
           A+L++ ++  +  D GG          ++ RLLV +  VGC+LG+ G VI  +R  T A+
Sbjct: 379 AILQLQNKTSEYSDKGG----------MTTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 428

Query: 182 IRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSLSHPA 18
           IRV   E  P CA  ++ELVQ+SG   +AK AL E+ + L     +D      PA
Sbjct: 429 IRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDANGGVEPA 483


>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
          Length = 668

 Score =  271 bits (693), Expect = 2e-70
 Identities = 147/249 (59%), Positives = 178/249 (71%), Gaps = 2/249 (0%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXX 564
           MEG RR    K  N QFK+    ++G  ++S  E+   NS  +DTVYRI+C         
Sbjct: 29  MEGXRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVI 88

Query: 563 XXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVL 384
                  KALREETQAKITV+DSVPGSDERVI I S   K  K  ++ +  + E + D +
Sbjct: 89  GKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQDHM 148

Query: 383 EPHCAAQDALLKVHDRIVQED-FGGAEKSHGSE-TVVSARLLVSNHMVGCLLGRKGDVIQ 210
           EPHC AQDAL+KVH+RI++ED FGG E    +E TVV+ARLLV N+MVGCLLG++GDVIQ
Sbjct: 149 EPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQ 208

Query: 209 RLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSL 30
           RLRSETGANIRVLPAEHLP CAMS+DELVQ+SG+PA+AKKAL+EV+TLLHQN  KDKP  
Sbjct: 209 RLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPS 268

Query: 29  SHPASYDRQ 3
           S P S+  Q
Sbjct: 269 SFPMSFGGQ 277



 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
 Frame = -3

Query: 536 LREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVL-EPHCAAQD 360
           L++ET A I V D++  S+ERVI +SS                    ++ L  P     +
Sbjct: 367 LQQETGASIHVEDALAESEERVIRVSS--------------------FEALWNPRSQTIE 406

Query: 359 ALLKVHDRIVQ-EDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVIQRLRSETGAN 183
           A+L++ ++  +  D GG          ++ RLLV +  VGC+LG+ G VI  +R  T A+
Sbjct: 407 AILQLQNKTSEYSDKGG----------MTTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 456

Query: 182 IRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSLSHPA 18
           IRV   E  P CA  ++ELVQ+SG   +AK AL E+ + L     +D      PA
Sbjct: 457 IRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDANGGVEPA 511


>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Solanum tuberosum]
          Length = 705

 Score =  271 bits (692), Expect = 3e-70
 Identities = 144/250 (57%), Positives = 177/250 (70%), Gaps = 3/250 (1%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXX 564
           M+  +R  L + SNPQFK+  G +    + S  E  SENS SSDT Y I+CQ        
Sbjct: 1   MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60

Query: 563 XXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGR---QVEGDY 393
                  KALREETQAKITV+DSVPGSD+R++ +SSPS K A+RQ+  K     + + + 
Sbjct: 61  GKGGSIIKALREETQAKITVADSVPGSDDRIVIVSSPSTKLARRQNNDKNNDNPETKEEN 120

Query: 392 DVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVI 213
             +EPHCAAQDALLKVH+RIV+ED  G +    SETV+  RLLV N++VGCLLGRKGDVI
Sbjct: 121 CSMEPHCAAQDALLKVHNRIVEEDLQGVQNEDKSETVIITRLLVPNNLVGCLLGRKGDVI 180

Query: 212 QRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPS 33
           Q+LRSETGA+IRVL AEHLPACAM+ DELVQ+SG+PA+ KKAL+EV+TLLHQN  KDKP 
Sbjct: 181 QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240

Query: 32  LSHPASYDRQ 3
            S P  +  Q
Sbjct: 241 SSFPMVHGAQ 250



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 61/194 (31%), Positives = 94/194 (48%)
 Frame = -3

Query: 614 DTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAK 435
           D   +I+C                K L+++T A I V D  P SDERVI +SS       
Sbjct: 315 DFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGAGIHVEDVAPESDERVIRVSS------- 367

Query: 434 RQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLVSN 255
                    +E  +D   P     DA+L++  +  +    G         +V+ RLL  +
Sbjct: 368 ---------LESFWD---PRSRTIDAILQLQSKTSEFSDKG---------IVTTRLLFPS 406

Query: 254 HMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEV 75
           + VGC++G+ G VI  +R  T A+IRVL  +  P CA +++ELVQ+SG   +AK AL E+
Sbjct: 407 NKVGCIIGQGGQVINEMRRRTQADIRVLSKDDKPRCASADEELVQISGSIGVAKDALVEI 466

Query: 74  TTLLHQNSWKDKPS 33
           ++ L +   +D  S
Sbjct: 467 SSRLRERCLRDANS 480


>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
           lycopersicum]
          Length = 707

 Score =  268 bits (686), Expect = 1e-69
 Identities = 146/251 (58%), Positives = 176/251 (70%), Gaps = 4/251 (1%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXX 564
           M+  +R  L + SNPQFK+  G +    + S  E  SENS SSDT Y I+CQ        
Sbjct: 1   MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60

Query: 563 XXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQ----VEGD 396
                  KALREETQAKITV+DSVPGSD+R++ ISSPS K A+RQ+  K        E +
Sbjct: 61  GKGGSIIKALREETQAKITVADSVPGSDDRIVIISSPSTKLARRQNNDKNNDNPETKEEN 120

Query: 395 YDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDV 216
           Y  +EPHCAAQDALLKVH+RIV+ED  G +    SE V+  RLLV N++VGCLLGRKGDV
Sbjct: 121 YS-MEPHCAAQDALLKVHNRIVEEDLLGVQNEDKSEAVIITRLLVPNNLVGCLLGRKGDV 179

Query: 215 IQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKP 36
           IQ+LRSETGA+IRVL AEHLPACAM+ DELVQ+SG+PA+ KKAL+EV+TLLHQN  KDKP
Sbjct: 180 IQKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKP 239

Query: 35  SLSHPASYDRQ 3
             S P  +  Q
Sbjct: 240 ISSFPMVHGAQ 250



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 62/194 (31%), Positives = 94/194 (48%)
 Frame = -3

Query: 614 DTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAK 435
           D   +I+C                K L++ET A I V D  P SDERVI +SS       
Sbjct: 315 DFTMKILCSAAKIGGVIGKGGFNVKQLQQETGAGIHVEDVAPESDERVIRVSS------- 367

Query: 434 RQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLVSN 255
                    +E  +D   P     DA+L++  +  +    G         +V+ RLL  +
Sbjct: 368 ---------LESFWD---PRSRTIDAILQLQSKTSEFSDKG---------IVTTRLLFPS 406

Query: 254 HMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEV 75
           + VGC++G+ G VI  +R  T A+IRVL  +  P CA +++ELVQ+SG   +AK AL E+
Sbjct: 407 NKVGCIIGQGGQVINEMRRRTQADIRVLSKDEKPRCASADEELVQISGSIGVAKDALVEI 466

Query: 74  TTLLHQNSWKDKPS 33
           ++ L +   +D  S
Sbjct: 467 SSRLRERCLRDANS 480


>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 537

 Score =  263 bits (672), Expect = 6e-68
 Identities = 144/249 (57%), Positives = 175/249 (70%), Gaps = 2/249 (0%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXX 564
           M+GN+R    K+ N QFK+    RKG  ++S REE S N    DTVYRI+C         
Sbjct: 1   MDGNKRNVFKKYQNNQFKRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGGVI 60

Query: 563 XXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVL 384
                  K LREETQAKITV+D VPGSDERVI I S  +K ++  + ++   +E + D++
Sbjct: 61  GKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTMENEQDIM 120

Query: 383 EPHCAAQDALLKVHDRIVQED-FGGAEKSHGSET-VVSARLLVSNHMVGCLLGRKGDVIQ 210
           EP+CAAQDALLKVHDRIV+ED FGG      +E   V+ARLLV N+MVGCLLG++GDVIQ
Sbjct: 121 EPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDVIQ 180

Query: 209 RLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSL 30
           RLRSETGANIRVLPA+HLP CAMS DELVQ+S +P +AKKAL+EV+TLLHQN  KDKP  
Sbjct: 181 RLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKPP- 239

Query: 29  SHPASYDRQ 3
           S P  Y  Q
Sbjct: 240 SVPMPYSGQ 248



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 64/223 (28%), Positives = 105/223 (47%)
 Frame = -3

Query: 689 KTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKI 510
           +++G   G   D  R   +E S  ++   +I+C                K ++++T A I
Sbjct: 289 QSSGFGPGGFDDVPRGHVAEPS--AEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASI 346

Query: 509 TVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIV 330
            V D+   SDERVI +S+                      +  P     DA+L++ ++  
Sbjct: 347 HVEDASAESDERVIRVSASEA-------------------LWNPRSQTIDAILQLQNKT- 386

Query: 329 QEDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPA 150
             DF  +EK       ++ RLLV +  VGC+LG+ G VI  +R  T A+IRV   +  P 
Sbjct: 387 -SDF--SEKG-----TITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPK 438

Query: 149 CAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSLSHP 21
           CA  ++ELVQ+SG+  +AK AL E+ + L   + +D  + + P
Sbjct: 439 CASEDEELVQISGKFGVAKDALAEIASRLRVRTLRDVNAGAEP 481


>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
           gi|557532839|gb|ESR44022.1| hypothetical protein
           CICLE_v10011187mg [Citrus clementina]
          Length = 528

 Score =  260 bits (665), Expect = 4e-67
 Identities = 141/251 (56%), Positives = 176/251 (70%), Gaps = 4/251 (1%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKK--TAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXX 570
           M+ ++R F  K  N QFK+    G++KGN  +S RE+   NS  +DTVYRI+C       
Sbjct: 1   MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 569 XXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYD 390
                    K+LREETQAKITV+D++PGS+ERVI I S   K AK Q+       E   +
Sbjct: 61  VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 389 VLEPHCAAQDALLKVHDRIVQED-FGGAEKSHGSE-TVVSARLLVSNHMVGCLLGRKGDV 216
            +EPHCAAQDALLKVHDRI++ED FGG      +E + V+ARLLV N+MVGCLLG++GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180

Query: 215 IQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKP 36
           IQRLRSETGANIRVLPA+ LP CAM+ DELVQ+SG+P +AK+AL+EV+TLLHQN  KDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240

Query: 35  SLSHPASYDRQ 3
             S P +Y  Q
Sbjct: 241 PSSFPQAYGGQ 251



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 62/201 (30%), Positives = 95/201 (47%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K L++ET A I V D+   SDERVI         
Sbjct: 314 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------- 364

Query: 440 AKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLV 261
             R SA++G        +  P     DA+L++ ++  +    G          ++ RLLV
Sbjct: 365 --RASAFEG--------LWNPRSQTIDAILQLQNKTSEFSEKGT---------ITTRLLV 405

Query: 260 SNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALF 81
            +  VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ELVQ+SG   +AK AL 
Sbjct: 406 PSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALT 465

Query: 80  EVTTLLHQNSWKDKPSLSHPA 18
           E+ + L   + +D    + PA
Sbjct: 466 EIASRLRARTLRDANVGAEPA 486


>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
           gi|557532838|gb|ESR44021.1| hypothetical protein
           CICLE_v10011187mg [Citrus clementina]
          Length = 710

 Score =  260 bits (665), Expect = 4e-67
 Identities = 141/251 (56%), Positives = 176/251 (70%), Gaps = 4/251 (1%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKK--TAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXX 570
           M+ ++R F  K  N QFK+    G++KGN  +S RE+   NS  +DTVYRI+C       
Sbjct: 1   MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 569 XXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYD 390
                    K+LREETQAKITV+D++PGS+ERVI I S   K AK Q+       E   +
Sbjct: 61  VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 389 VLEPHCAAQDALLKVHDRIVQED-FGGAEKSHGSE-TVVSARLLVSNHMVGCLLGRKGDV 216
            +EPHCAAQDALLKVHDRI++ED FGG      +E + V+ARLLV N+MVGCLLG++GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180

Query: 215 IQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKP 36
           IQRLRSETGANIRVLPA+ LP CAM+ DELVQ+SG+P +AK+AL+EV+TLLHQN  KDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240

Query: 35  SLSHPASYDRQ 3
             S P +Y  Q
Sbjct: 241 PSSFPQAYGGQ 251



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 62/201 (30%), Positives = 95/201 (47%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K L++ET A I V D+   SDERVI         
Sbjct: 314 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------- 364

Query: 440 AKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLV 261
             R SA++G        +  P     DA+L++ ++  +    G          ++ RLLV
Sbjct: 365 --RASAFEG--------LWNPRSQTIDAILQLQNKTSEFSEKGT---------ITTRLLV 405

Query: 260 SNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALF 81
            +  VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ELVQ+SG   +AK AL 
Sbjct: 406 PSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALT 465

Query: 80  EVTTLLHQNSWKDKPSLSHPA 18
           E+ + L   + +D    + PA
Sbjct: 466 EIASRLRARTLRDANVGAEPA 486


>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
          Length = 569

 Score =  259 bits (662), Expect = 9e-67
 Identities = 139/251 (55%), Positives = 176/251 (70%), Gaps = 4/251 (1%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKK--TAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXX 570
           M+ ++R F  K  N QFK+    G++KGN  +S RE+   NS  +DTVYRI+C       
Sbjct: 1   MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 569 XXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYD 390
                    K+LREETQAKITV+D++PGS+ERVI I S   K AK Q+       E   +
Sbjct: 61  VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 389 VLEPHCAAQDALLKVHDRIVQED-FGGAEKSHGSE-TVVSARLLVSNHMVGCLLGRKGDV 216
            +EPHCAAQDALLKVHDRI++ED FGG      +E + ++ARLLV N+MVGCLLG++GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 180

Query: 215 IQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKP 36
           IQRLRSETGANIRVLPA+ LP CAM+ DE+VQ+SG+P +AK+AL+EV+TLLHQN  KDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240

Query: 35  SLSHPASYDRQ 3
             S P +Y  Q
Sbjct: 241 PSSFPQAYGGQ 251


>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
          Length = 715

 Score =  259 bits (661), Expect = 1e-66
 Identities = 140/251 (55%), Positives = 176/251 (70%), Gaps = 4/251 (1%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKK--TAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXX 570
           M+ ++R F  K  N QFK+    G++KGN  +S RE+   NS  +DTVYRI+C       
Sbjct: 1   MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 569 XXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYD 390
                    K+LREETQAKITV+D++PGS+ERVI I S   K AK+ +       E   +
Sbjct: 61  VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKKVNKDDDSAAETKKE 120

Query: 389 VLEPHCAAQDALLKVHDRIVQED-FGGAEKSHGSE-TVVSARLLVSNHMVGCLLGRKGDV 216
            +EPHCAAQDALLKVHDRI++ED FGG      +E + V+ARLLV N+MVGCLLG++GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180

Query: 215 IQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKP 36
           IQRLRSETGANIRVLPA+ LP CAM+ DELVQ+SG+P +AK+AL+EV+TLLHQN  KDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240

Query: 35  SLSHPASYDRQ 3
             S P +Y  Q
Sbjct: 241 PSSFPQAYGGQ 251



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 62/201 (30%), Positives = 95/201 (47%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K L++ET A I V D+   SDERVI         
Sbjct: 314 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------- 364

Query: 440 AKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLV 261
             R SA++G        +  P     DA+L++ ++  +    G          ++ RLLV
Sbjct: 365 --RASAFEG--------LWNPRSQTIDAILQLQNKTSEFSEKGT---------ITTRLLV 405

Query: 260 SNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALF 81
            +  VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ELVQ+SG   +AK AL 
Sbjct: 406 PSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALT 465

Query: 80  EVTTLLHQNSWKDKPSLSHPA 18
           E+ + L   + +D    + PA
Sbjct: 466 EIASRLRARTLRDANVGAEPA 486


>ref|XP_007217649.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
           gi|462413799|gb|EMJ18848.1| hypothetical protein
           PRUPE_ppa027198mg, partial [Prunus persica]
          Length = 576

 Score =  250 bits (638), Expect = 5e-64
 Identities = 138/249 (55%), Positives = 171/249 (68%), Gaps = 5/249 (2%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAG---LRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXX 573
           M+GN+R F  K  N QFK+  G    +KGN ++S RE+  EN  S DTVYRI+C      
Sbjct: 1   MDGNKRNFFKKRPNVQFKRKGGNNNYKKGNWNNSTREQLLENYQSLDTVYRILCPSKRIG 60

Query: 572 XXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDY 393
                     KALREET+AKITV+DSV GSDERVI I S   K + +Q+       E + 
Sbjct: 61  GVIGKGGGIVKALREETRAKITVADSVLGSDERVIIIFSSPTKISSKQTNDGDSSEENEL 120

Query: 392 DVLEPHCAAQDALLKVHDRIVQED-FGGAEKSHGSE-TVVSARLLVSNHMVGCLLGRKGD 219
           + ++PHCAAQDALLKVH+RIV+ED FGG      +E +VV+ARLLV N+MVGCLLG+ GD
Sbjct: 121 EPMDPHCAAQDALLKVHNRIVEEDLFGGVTFDDDNENSVVTARLLVPNNMVGCLLGKGGD 180

Query: 218 VIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDK 39
           VIQRLRSET A+IRVLPA+ LP CAM  DELVQ+SG+P + K+AL+EV+TLLHQN  KDK
Sbjct: 181 VIQRLRSETSASIRVLPADQLPTCAMETDELVQISGKPDVTKRALYEVSTLLHQNPRKDK 240

Query: 38  PSLSHPASY 12
           P    P  +
Sbjct: 241 PPSGFPMPF 249



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 54/173 (31%), Positives = 88/173 (50%)
 Frame = -3

Query: 536 LREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVLEPHCAAQDA 357
           L+ ET A I V ++   S+ERVI +S+                 E  ++   P     +A
Sbjct: 342 LQLETGASIHVQEASTDSEERVIHVSA----------------FEAFWN---PISQTIEA 382

Query: 356 LLKVHDRIVQEDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVIQRLRSETGANIR 177
           +L++ ++  +    G         +++ RLLV +  VGC+LG+ G VI  +R  T A+IR
Sbjct: 383 ILELQNKTSELSDKG---------IITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIR 433

Query: 176 VLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSLSHPA 18
           V   +  P CA  ++ELVQ+SG   +AK AL E+T+ L   + +D  + + PA
Sbjct: 434 VYSKDDRPRCAAEDEELVQISGNFGVAKDALAEITSRLRVRTLRDANAGAEPA 486


>ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Populus trichocarpa]
           gi|550339070|gb|ERP61256.1| hypothetical protein
           POPTR_0005s15690g [Populus trichocarpa]
          Length = 563

 Score =  249 bits (635), Expect = 1e-63
 Identities = 142/247 (57%), Positives = 170/247 (68%), Gaps = 6/247 (2%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKK--TAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXX 570
           M+GNRR +  K  N  FK+   +  RKG   DS  EE S +    DTVYRI+C       
Sbjct: 1   MDGNRRKYFKKPGNNLFKRKGVSSSRKGKWSDSHGEECSGDG---DTVYRILCPSRKIGG 57

Query: 569 XXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQV-EGDY 393
                    KALREETQ+KITV+DSV GSDERVI I S SDK  ++    +G     G  
Sbjct: 58  VIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPAGNGQQ 117

Query: 392 DVLEPHCAAQDALLKVHDRIVQED-FGG-AEKSHGSETVVSARLLVSNHMVGCLLGRKGD 219
           +  EPHCAAQDALLKVHDRIV+ED FGG A        VV+ARLLV N+MVGC+LG++GD
Sbjct: 118 EAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGD 177

Query: 218 VIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDK 39
           VIQRLRSETGANIRVLPA+HLP+CAM  DELVQ+SG+PA+AK+AL+E++ LLHQN  KDK
Sbjct: 178 VIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRKDK 237

Query: 38  -PSLSHP 21
            PS+  P
Sbjct: 238 LPSVPMP 244



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 62/200 (31%), Positives = 96/200 (48%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K +++ET A I V D+   S+ER I         
Sbjct: 308 SAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAI--------- 358

Query: 440 AKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLV 261
             R SA++G        +  P     DA+L++ D+    DF  +EK      ++  RLLV
Sbjct: 359 --RVSAFEG--------LWNPRSQTIDAILQLQDKT--SDF--SEKG-----MIITRLLV 399

Query: 260 SNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALF 81
            +  VGC+LG+ G VI  +R    A+IRV P    P CA  ++ELVQ+SG   +AK AL 
Sbjct: 400 PSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALA 459

Query: 80  EVTTLLHQNSWKDKPSLSHP 21
           E+ + L   + +D  + + P
Sbjct: 460 EIASRLRARTLRDANAGTEP 479


>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
           vesca subsp. vesca]
          Length = 760

 Score =  248 bits (634), Expect = 2e-63
 Identities = 135/240 (56%), Positives = 171/240 (71%), Gaps = 2/240 (0%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFK-KTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXX 567
           M+ N+R  L++    QFK K +  +KGN ++S RE+ S N+ S +TVYRI+C        
Sbjct: 1   MDWNKRNVLSQRPTVQFKRKGSSNQKGNLNNSNREQSSGNAQSLETVYRILCPSKKIGGV 60

Query: 566 XXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDV 387
                   K+LREET++KITVSDSVPGSDERVI I SP  K +++Q++ +      +   
Sbjct: 61  IGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIFSPPTKISRKQNSDEDSHKADEQKP 120

Query: 386 LEPHCAAQDALLKVHDRIVQED-FGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVIQ 210
           LEPHCAAQDALLKVHDRIV+ED + G      +E +V  RLLV N++VGCLLG++GDVIQ
Sbjct: 121 LEPHCAAQDALLKVHDRIVEEDLYDGVTFDDDNENIVVTRLLVPNNLVGCLLGKRGDVIQ 180

Query: 209 RLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSL 30
           RLRSET ANIRVLPA+ LP CAM  DELVQ+SG+P +AKKAL+EV+TLLHQN  KDKP L
Sbjct: 181 RLRSETRANIRVLPADQLPTCAMDTDELVQISGKPDVAKKALYEVSTLLHQNPRKDKPPL 240



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K L+EET A I V D+   S+ERVI +S+     
Sbjct: 309 SAEFFIKILCSAGKIGGVIGKGGFNVKQLQEETGANIHVQDASTDSEERVIRVSA----- 363

Query: 440 AKRQSAYKGRQVEGDYDVLE-PHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLL 264
                          ++VL  P     +A+L++ ++  +    G          ++ RLL
Sbjct: 364 ---------------FEVLRIPRSQTIEAILQLQNKASELSDKGT---------ITTRLL 399

Query: 263 VSNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKAL 84
           V +  VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ELVQ+SG  A+AK AL
Sbjct: 400 VPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDDRPKCADEDEELVQISGNFAVAKDAL 459

Query: 83  FEVTTLLHQNSWKD 42
            E+T+ L   + +D
Sbjct: 460 AEITSRLRIRTLRD 473


>ref|XP_007033280.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma
           cacao] gi|508712309|gb|EOY04206.1| RNA-binding KH
           domain-containing protein isoform 5 [Theobroma cacao]
          Length = 591

 Score =  231 bits (589), Expect = 2e-58
 Identities = 138/256 (53%), Positives = 172/256 (67%), Gaps = 9/256 (3%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQH----DSIREEFSENSHSSDTVYRIICQXXXX 576
           M+G +R FL K  N  FK+  G+    +     +S  E+ S N +S DTVYR++C     
Sbjct: 1   MDGRKRNFLKKPMNTPFKRK-GVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKI 59

Query: 575 XXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGD 396
                      KALREETQAKITV DSV G DERVI I S S  + K Q++ +  + E  
Sbjct: 60  GGVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYS-SPMKVKTQNSDEDSRGENK 118

Query: 395 YD---VLEPHCAAQDALLKVHDRIVQED-FGG-AEKSHGSETVVSARLLVSNHMVGCLLG 231
            D   V+EP CAAQDALLKVHD+I ++D FGG A       TVV+ARLLV N+MVGCLLG
Sbjct: 119 KDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLG 178

Query: 230 RKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNS 51
           ++GDVIQRLRSETGA+IR+LPA+HLPACAM+ DELVQ+SG+  +AK+AL+EV+TLLHQN 
Sbjct: 179 KRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNP 238

Query: 50  WKDKPSLSHPASYDRQ 3
            KD P LS P  +  Q
Sbjct: 239 RKDNPPLSFPVPHAGQ 254



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 60/193 (31%), Positives = 93/193 (48%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K L++ET A I V D+   SDERVI +S+     
Sbjct: 312 SAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSA----- 366

Query: 440 AKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLV 261
                      +EG ++   P     DA+L++ ++  +    G          V+ RLLV
Sbjct: 367 -----------IEGLWN---PRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLV 403

Query: 260 SNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALF 81
            +  VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ELVQ+SG   +AK AL 
Sbjct: 404 PSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALA 463

Query: 80  EVTTLLHQNSWKD 42
           E+ + L   + +D
Sbjct: 464 EIASRLRVRTLRD 476


>ref|XP_007033279.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma
           cacao] gi|508712308|gb|EOY04205.1| RNA-binding KH
           domain-containing protein isoform 4 [Theobroma cacao]
          Length = 706

 Score =  231 bits (589), Expect = 2e-58
 Identities = 138/256 (53%), Positives = 172/256 (67%), Gaps = 9/256 (3%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQH----DSIREEFSENSHSSDTVYRIICQXXXX 576
           M+G +R FL K  N  FK+  G+    +     +S  E+ S N +S DTVYR++C     
Sbjct: 1   MDGRKRNFLKKPMNTPFKRK-GVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKI 59

Query: 575 XXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGD 396
                      KALREETQAKITV DSV G DERVI I S S  + K Q++ +  + E  
Sbjct: 60  GGVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYS-SPMKVKTQNSDEDSRGENK 118

Query: 395 YD---VLEPHCAAQDALLKVHDRIVQED-FGG-AEKSHGSETVVSARLLVSNHMVGCLLG 231
            D   V+EP CAAQDALLKVHD+I ++D FGG A       TVV+ARLLV N+MVGCLLG
Sbjct: 119 KDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLG 178

Query: 230 RKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNS 51
           ++GDVIQRLRSETGA+IR+LPA+HLPACAM+ DELVQ+SG+  +AK+AL+EV+TLLHQN 
Sbjct: 179 KRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNP 238

Query: 50  WKDKPSLSHPASYDRQ 3
            KD P LS P  +  Q
Sbjct: 239 RKDNPPLSFPVPHAGQ 254



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 60/193 (31%), Positives = 93/193 (48%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K L++ET A I V D+   SDERVI +S+     
Sbjct: 312 SAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSA----- 366

Query: 440 AKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLV 261
                      +EG ++   P     DA+L++ ++  +    G          V+ RLLV
Sbjct: 367 -----------IEGLWN---PRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLV 403

Query: 260 SNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALF 81
            +  VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ELVQ+SG   +AK AL 
Sbjct: 404 PSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALA 463

Query: 80  EVTTLLHQNSWKD 42
           E+ + L   + +D
Sbjct: 464 EIASRLRVRTLRD 476


>ref|XP_007033277.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma
           cacao] gi|508712306|gb|EOY04203.1| RNA-binding KH
           domain-containing protein isoform 2 [Theobroma cacao]
          Length = 580

 Score =  231 bits (589), Expect = 2e-58
 Identities = 138/256 (53%), Positives = 172/256 (67%), Gaps = 9/256 (3%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQH----DSIREEFSENSHSSDTVYRIICQXXXX 576
           M+G +R FL K  N  FK+  G+    +     +S  E+ S N +S DTVYR++C     
Sbjct: 1   MDGRKRNFLKKPMNTPFKRK-GVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKI 59

Query: 575 XXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGD 396
                      KALREETQAKITV DSV G DERVI I S S  + K Q++ +  + E  
Sbjct: 60  GGVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYS-SPMKVKTQNSDEDSRGENK 118

Query: 395 YD---VLEPHCAAQDALLKVHDRIVQED-FGG-AEKSHGSETVVSARLLVSNHMVGCLLG 231
            D   V+EP CAAQDALLKVHD+I ++D FGG A       TVV+ARLLV N+MVGCLLG
Sbjct: 119 KDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLG 178

Query: 230 RKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNS 51
           ++GDVIQRLRSETGA+IR+LPA+HLPACAM+ DELVQ+SG+  +AK+AL+EV+TLLHQN 
Sbjct: 179 KRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNP 238

Query: 50  WKDKPSLSHPASYDRQ 3
            KD P LS P  +  Q
Sbjct: 239 RKDNPPLSFPVPHAGQ 254



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 60/193 (31%), Positives = 93/193 (48%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K L++ET A I V D+   SDERVI +S+     
Sbjct: 312 SAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSA----- 366

Query: 440 AKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLV 261
                      +EG ++   P     DA+L++ ++  +    G          V+ RLLV
Sbjct: 367 -----------IEGLWN---PRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLV 403

Query: 260 SNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALF 81
            +  VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ELVQ+SG   +AK AL 
Sbjct: 404 PSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALA 463

Query: 80  EVTTLLHQNSWKD 42
           E+ + L   + +D
Sbjct: 464 EIASRLRVRTLRD 476


>ref|XP_007033276.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
           cacao] gi|590652914|ref|XP_007033278.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
           gi|508712305|gb|EOY04202.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
           gi|508712307|gb|EOY04204.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
          Length = 706

 Score =  231 bits (589), Expect = 2e-58
 Identities = 138/256 (53%), Positives = 172/256 (67%), Gaps = 9/256 (3%)
 Frame = -3

Query: 743 MEGNRRMFLNKHSNPQFKKTAGLRKGNQH----DSIREEFSENSHSSDTVYRIICQXXXX 576
           M+G +R FL K  N  FK+  G+    +     +S  E+ S N +S DTVYR++C     
Sbjct: 1   MDGRKRNFLKKPMNTPFKRK-GVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKI 59

Query: 575 XXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGD 396
                      KALREETQAKITV DSV G DERVI I S S  + K Q++ +  + E  
Sbjct: 60  GGVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYS-SPMKVKTQNSDEDSRGENK 118

Query: 395 YD---VLEPHCAAQDALLKVHDRIVQED-FGG-AEKSHGSETVVSARLLVSNHMVGCLLG 231
            D   V+EP CAAQDALLKVHD+I ++D FGG A       TVV+ARLLV N+MVGCLLG
Sbjct: 119 KDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLG 178

Query: 230 RKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNS 51
           ++GDVIQRLRSETGA+IR+LPA+HLPACAM+ DELVQ+SG+  +AK+AL+EV+TLLHQN 
Sbjct: 179 KRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNP 238

Query: 50  WKDKPSLSHPASYDRQ 3
            KD P LS P  +  Q
Sbjct: 239 RKDNPPLSFPVPHAGQ 254



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 60/193 (31%), Positives = 93/193 (48%)
 Frame = -3

Query: 620 SSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISSPSDKQ 441
           S++   +I+C                K L++ET A I V D+   SDERVI +S+     
Sbjct: 312 SAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSA----- 366

Query: 440 AKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLV 261
                      +EG ++   P     DA+L++ ++  +    G          V+ RLLV
Sbjct: 367 -----------IEGLWN---PRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLV 403

Query: 260 SNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALF 81
            +  VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ELVQ+SG   +AK AL 
Sbjct: 404 PSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALA 463

Query: 80  EVTTLLHQNSWKD 42
           E+ + L   + +D
Sbjct: 464 EIASRLRVRTLRD 476


>ref|XP_004306018.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
           vesca subsp. vesca]
          Length = 344

 Score =  207 bits (528), Expect = 3e-51
 Identities = 112/203 (55%), Positives = 145/203 (71%), Gaps = 1/203 (0%)
 Frame = -3

Query: 635 SENSHSSDTVYRIICQXXXXXXXXXXXXXXXKALREETQAKITVSDSVPGSDERVITISS 456
           S N+ S +T+YRI+C                K+LREET++KITVSDSVPGSDERVI I S
Sbjct: 8   SGNTLSLETLYRILCPSKKIGGVIGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIFS 67

Query: 455 PSDKQAKRQSAYKGRQVEGDYDVLEPHCAAQDALLKVHDRIVQED-FGGAEKSHGSETVV 279
           P  K +++Q++ +      +   LEPHCAAQDALLKVHDRIV+ED + G      +E +V
Sbjct: 68  PPTKISRKQNSDEDSHKADEQKPLEPHCAAQDALLKVHDRIVEEDLYNGVTFDDDNENIV 127

Query: 278 SARLLVSNHMVGCLLGRKGDVIQRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAI 99
             RLLV N++VGCLLG++G+VI+RLRSET ANIRVL A+ LP CA+  DEL  +SG+P +
Sbjct: 128 VTRLLVPNNLVGCLLGKRGEVIKRLRSETRANIRVLHADQLPTCALDTDEL--ISGKPDV 185

Query: 98  AKKALFEVTTLLHQNSWKDKPSL 30
           AK+AL+EV+TLLH+N  KDKP L
Sbjct: 186 AKRALYEVSTLLHKNPRKDKPPL 208


>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
           brachyantha]
          Length = 773

 Score =  187 bits (475), Expect = 4e-45
 Identities = 109/231 (47%), Positives = 152/231 (65%), Gaps = 4/231 (1%)
 Frame = -3

Query: 710 HSNPQFKKTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXXXXXXXXXKALR 531
           HSN   +K    R   +HD    + S +S  ++T+YRI+C                KALR
Sbjct: 19  HSNSDDRKRK--RLNTKHD----DGSMSSQPTETIYRILCPVKKIGSVLGRGGDVVKALR 72

Query: 530 EETQAKITVSDSVPGSDERVITISS-PSDKQAKRQSAYKGRQVEGDYDVLEPHCAAQDAL 354
           +ET+AKI V+DS+PG+DERVI I + PS  Q++   A +    +G +  ++PHC AQDAL
Sbjct: 73  DETKAKIRVADSIPGADERVIIIFNYPS--QSEDDEAAQNISTDG-FQNMKPHCFAQDAL 129

Query: 353 LKVHDRIVQ-EDFGGAEKSHGSETV--VSARLLVSNHMVGCLLGRKGDVIQRLRSETGAN 183
           LK+HD+I + ED  G      SETV  V+AR+LV  + VGCLLG+ G +IQ+LR+ETGA 
Sbjct: 130 LKIHDKIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSIIQQLRNETGAG 189

Query: 182 IRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSL 30
           IRVLP+E+LP CA+ +DELVQ+SG P++ +KAL+E++T LHQ+  KD P L
Sbjct: 190 IRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNPPL 240



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 3/239 (1%)
 Frame = -3

Query: 719 LNKHSNPQFKKTAGLRKG--NQHDSIREEFSENSHSSDTVYRIICQXXXXXXXXXXXXXX 546
           L+   +PQ       R G    H    EEFS          +I+C               
Sbjct: 268 LHVDHSPQIPLLDPYRNGPLRYHAGEAEEFS---------IKILCASEHIGQVIGKSGGN 318

Query: 545 XKALREETQAKITVSD-SVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVLEPHCA 369
            + + ++T A+I V +     S ER+I +SS              +++  D     P   
Sbjct: 319 VRQVEQQTGARIQVKEVGKNASGERLIVVSS--------------QEIPDD-----PVSP 359

Query: 368 AQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVIQRLRSETG 189
             +AL+ +H ++       AE  H     ++ RL+V ++ VGC+LG  G VI  +R  TG
Sbjct: 360 TIEALILLHSKVSAP----AENRH-----LTTRLVVPSNKVGCILGEGGKVITEMRRRTG 410

Query: 188 ANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSLSHPASY 12
           A IRV      P     ++ELVQV+G PAIA+ AL E+ + L   + +D  S ++P  +
Sbjct: 411 AEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNNPPPF 469


>ref|XP_004982741.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X3
           [Setaria italica]
          Length = 776

 Score =  177 bits (450), Expect = 3e-42
 Identities = 99/229 (43%), Positives = 146/229 (63%), Gaps = 2/229 (0%)
 Frame = -3

Query: 710 HSNPQFKKTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXXXXXXXXXKALR 531
           HSN    K    R  ++HD    + S  S   +T+YRI+C                KALR
Sbjct: 16  HSNSDDGKRK--RLNSRHD----DASMPSEPIETIYRILCPVKKIGSVLGRGGDIVKALR 69

Query: 530 EETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVLEPHCAAQDALL 351
           EET++KI V+DS+PG+DERVI I +  ++  +     +    +G  + ++PHC+AQDALL
Sbjct: 70  EETKSKIRVADSIPGADERVIIIFNYQNQSEQADETAENITSDGS-ESMKPHCSAQDALL 128

Query: 350 KVHDRIVQEDFGGAEKSHGSETV--VSARLLVSNHMVGCLLGRKGDVIQRLRSETGANIR 177
           K+HD+IV ++      ++ SE+   V+AR+LV  + VGCLLG+ G +IQ+LRS+TGA IR
Sbjct: 129 KIHDKIVADEVHDGVANNKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIR 188

Query: 176 VLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSL 30
           VLP+E LP CA+ +DELVQ+SG P++ +KAL+E++T LHQ+  K+   L
Sbjct: 189 VLPSESLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPL 237



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
 Frame = -3

Query: 530 EETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDV------------ 387
           EE   +I  +  + GS   VI  S  + K+ ++Q+  + +  E D D             
Sbjct: 290 EEFSVRILCASELIGS---VIGKSGANVKRVEQQTGARIKVQEFDKDASGERLIIVSSKE 346

Query: 386 --LEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVI 213
              +P     +AL+ +HD++       +EK H     VS RL+V +  VGC+LG  G +I
Sbjct: 347 TPADPISPTIEALMLLHDKVSVP----SEKRH-----VSTRLVVPSSKVGCILGEGGKII 397

Query: 212 QRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPS 33
             +R  T A IRV      P     +DELVQV+G PAIA+ AL EV + L   + +D  S
Sbjct: 398 TEMRRRTEAEIRVYSKADKPKYLSFDDELVQVAGPPAIARGALAEVASRLRTRTLRDTSS 457

Query: 32  LSHP 21
            ++P
Sbjct: 458 TNNP 461


>ref|XP_004982740.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2
           [Setaria italica]
          Length = 794

 Score =  177 bits (450), Expect = 3e-42
 Identities = 99/229 (43%), Positives = 146/229 (63%), Gaps = 2/229 (0%)
 Frame = -3

Query: 710 HSNPQFKKTAGLRKGNQHDSIREEFSENSHSSDTVYRIICQXXXXXXXXXXXXXXXKALR 531
           HSN    K    R  ++HD    + S  S   +T+YRI+C                KALR
Sbjct: 16  HSNSDDGKRK--RLNSRHD----DASMPSEPIETIYRILCPVKKIGSVLGRGGDIVKALR 69

Query: 530 EETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDVLEPHCAAQDALL 351
           EET++KI V+DS+PG+DERVI I +  ++  +     +    +G  + ++PHC+AQDALL
Sbjct: 70  EETKSKIRVADSIPGADERVIIIFNYQNQSEQADETAENITSDGS-ESMKPHCSAQDALL 128

Query: 350 KVHDRIVQEDFGGAEKSHGSETV--VSARLLVSNHMVGCLLGRKGDVIQRLRSETGANIR 177
           K+HD+IV ++      ++ SE+   V+AR+LV  + VGCLLG+ G +IQ+LRS+TGA IR
Sbjct: 129 KIHDKIVADEVHDGVANNKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIR 188

Query: 176 VLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPSL 30
           VLP+E LP CA+ +DELVQ+SG P++ +KAL+E++T LHQ+  K+   L
Sbjct: 189 VLPSESLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPL 237



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
 Frame = -3

Query: 530 EETQAKITVSDSVPGSDERVITISSPSDKQAKRQSAYKGRQVEGDYDV------------ 387
           EE   +I  +  + GS   VI  S  + K+ ++Q+  + +  E D D             
Sbjct: 290 EEFSVRILCASELIGS---VIGKSGANVKRVEQQTGARIKVQEFDKDASGERLIIVSSKE 346

Query: 386 --LEPHCAAQDALLKVHDRIVQEDFGGAEKSHGSETVVSARLLVSNHMVGCLLGRKGDVI 213
              +P     +AL+ +HD++       +EK H     VS RL+V +  VGC+LG  G +I
Sbjct: 347 TPADPISPTIEALMLLHDKVSVP----SEKRH-----VSTRLVVPSSKVGCILGEGGKII 397

Query: 212 QRLRSETGANIRVLPAEHLPACAMSNDELVQVSGRPAIAKKALFEVTTLLHQNSWKDKPS 33
             +R  T A IRV      P     +DELVQV+G PAIA+ AL EV + L   + +D  S
Sbjct: 398 TEMRRRTEAEIRVYSKADKPKYLSFDDELVQVAGPPAIARGALAEVASRLRTRTLRDTSS 457

Query: 32  LSHP 21
            ++P
Sbjct: 458 TNNP 461