BLASTX nr result

ID: Mentha24_contig00029383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00029383
         (493 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU33645.1| hypothetical protein MIMGU_mgv1a026930mg [Mimulus...    62   1e-07
ref|XP_006396677.1| hypothetical protein EUTSA_v10029134mg [Eutr...    58   2e-06
gb|AHW45788.1| ATP synthase gamma chain [Brassica rapa subsp. ch...    56   5e-06

>gb|EYU33645.1| hypothetical protein MIMGU_mgv1a026930mg [Mimulus guttatus]
          Length = 373

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/83 (48%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = -3

Query: 242 MSCFNSSTALCP---NNCGPVSFQSQLNPHPYXXXXXXXXXXXXXXXXXXSIQNSLRKIR 72
           MS FN  TA+ P   +N   +SF SQLN  P                    I+N +R++R
Sbjct: 1   MSSFNLLTAITPKSVSNPNSISFISQLNQFP----PILESSTRNGIRELRPIRNGIRELR 56

Query: 71  ERIETVKNTQKVTEAMKLVAAAK 3
           ERIE+VK TQKVTEAMKLVAAAK
Sbjct: 57  ERIESVKKTQKVTEAMKLVAAAK 79


>ref|XP_006396677.1| hypothetical protein EUTSA_v10029134mg [Eutrema salsugineum]
           gi|557097694|gb|ESQ38130.1| hypothetical protein
           EUTSA_v10029134mg [Eutrema salsugineum]
          Length = 415

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
 Frame = -3

Query: 245 TMSCFNSSTALCPN-----NCGPVSFQSQLNPHPYXXXXXXXXXXXXXXXXXXSIQNSLR 81
           TM+C N +T    +     +   +SF+S LNP P                    IQ+SLR
Sbjct: 41  TMACTNLTTMWVSSKPSLSDSSSLSFRSVLNPLPLPNHNSSPSRSSSVSP----IQSSLR 96

Query: 80  KIRERIETVKNTQKVTEAMKLVAAAK 3
           ++R+RI++VKNTQK+TEAMKLVAAAK
Sbjct: 97  ELRDRIDSVKNTQKITEAMKLVAAAK 122


>gb|AHW45788.1| ATP synthase gamma chain [Brassica rapa subsp. chinensis]
          Length = 374

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
 Frame = -3

Query: 242 MSCFNSSTALCPN-----NCGPVSFQSQLNPHPYXXXXXXXXXXXXXXXXXXSIQNSLRK 78
           M+C N +T    +     +   +SF+S LNP P                    IQ+SLR+
Sbjct: 1   MACSNLTTMYLSSKPSLSDSSSLSFRSVLNPLPLPNHNSSPSRSSSVSP----IQSSLRE 56

Query: 77  IRERIETVKNTQKVTEAMKLVAAAK 3
           +R+RI++VKNTQK+TEAMKLVAAAK
Sbjct: 57  LRDRIDSVKNTQKITEAMKLVAAAK 81


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