BLASTX nr result
ID: Mentha24_contig00029247
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha24_contig00029247 (324 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313421.2| zinc finger family protein [Populus trichoca... 57 2e-06 ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi... 57 2e-06 ref|XP_002309072.1| hypothetical protein POPTR_0006s08810g [Popu... 56 5e-06 ref|XP_002298344.2| hypothetical protein POPTR_0001s25010g [Popu... 56 6e-06 ref|XP_003543521.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 56 6e-06 >ref|XP_002313421.2| zinc finger family protein [Populus trichocarpa] gi|550330980|gb|EEE87376.2| zinc finger family protein [Populus trichocarpa] Length = 342 Score = 57.4 bits (137), Expect = 2e-06 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 14/110 (12%) Frame = -3 Query: 289 SYWCYQCTRIVSVTAE---------ETVVCPHCRGGFIQSVDPTDFSP-----EXXXXXX 152 SYWCY+C+R V+V+ + CPHC GGF++ + S Sbjct: 10 SYWCYRCSRFVTVSPHNEDEEHSHTSNITCPHCDGGFVEEIQSNSTSDIRQNRSRVSNLT 69 Query: 151 XXXXXXXXXXXXNPLIVLRNNXXXXXXXXXXXXXXXELYYDDGSGTGIRP 2 NP++VLR E YYDDG GTG+RP Sbjct: 70 RNRRNAGDRSSFNPVVVLRGTTPAAAAEDNEDGSAYEFYYDDGIGTGLRP 119 >ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi|355507760|gb|AES88902.1| RING finger protein [Medicago truncatula] Length = 369 Score = 57.4 bits (137), Expect = 2e-06 Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 14/110 (12%) Frame = -3 Query: 289 SYWCYQCTRIVSVTAEETVVCPHCRGGFIQSVD------------PTDFSPEXXXXXXXX 146 SYWCY CTR ++++ +VCPHC GF++ + P D Sbjct: 11 SYWCYSCTRFINLSDHTLIVCPHCDNGFVEEIAAGESPHHRLSPFPADTVSSRRQGFRRR 70 Query: 145 XXXXXXXXXXNPLIVLRN--NXXXXXXXXXXXXXXXELYYDDGSGTGIRP 2 NP+IVLR + EL+YDDG G+G+RP Sbjct: 71 RRDAGSRSPFNPVIVLRGAGDDGVGEDGAGAGGSAFELFYDDGDGSGLRP 120 >ref|XP_002309072.1| hypothetical protein POPTR_0006s08810g [Populus trichocarpa] gi|222855048|gb|EEE92595.1| hypothetical protein POPTR_0006s08810g [Populus trichocarpa] Length = 311 Score = 56.2 bits (134), Expect = 5e-06 Identities = 29/96 (30%), Positives = 45/96 (46%) Frame = -3 Query: 289 SYWCYQCTRIVSVTAEETVVCPHCRGGFIQSVDPTDFSPEXXXXXXXXXXXXXXXXXXNP 110 S+WCY+C R + + +++++CP C GGFI+ + T NP Sbjct: 8 SFWCYRCNRSIRLPTQDSILCPDCGGGFIEEIGITRPHHRLTAAHRTRLRTGGDHSPFNP 67 Query: 109 LIVLRNNXXXXXXXXXXXXXXXELYYDDGSGTGIRP 2 +I+LR ELYYDDG+ +G+RP Sbjct: 68 VIILRG------ATTDLASGNFELYYDDGAASGLRP 97 >ref|XP_002298344.2| hypothetical protein POPTR_0001s25010g [Populus trichocarpa] gi|550348125|gb|EEE83149.2| hypothetical protein POPTR_0001s25010g [Populus trichocarpa] Length = 426 Score = 55.8 bits (133), Expect = 6e-06 Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 12/108 (11%) Frame = -3 Query: 289 SYWCYQCTRIVSVTAEET---------VVCPHCRGGF---IQSVDPTDFSPEXXXXXXXX 146 SYWCY+C R V+V+ + CPHC GGF IQS + + Sbjct: 8 SYWCYRCARFVTVSPRNDDEEQNHANYITCPHCDGGFVEEIQSNNDNRRNRSRVSNFIRN 67 Query: 145 XXXXXXXXXXNPLIVLRNNXXXXXXXXXXXXXXXELYYDDGSGTGIRP 2 NP+IVLR E YYDDG+G+G+RP Sbjct: 68 RRNAGDRSPYNPVIVLRGTSPAVAADDNDEGSAYEFYYDDGTGSGLRP 115 >ref|XP_003543521.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max] Length = 314 Score = 55.8 bits (133), Expect = 6e-06 Identities = 34/96 (35%), Positives = 41/96 (42%) Frame = -3 Query: 289 SYWCYQCTRIVSVTAEETVVCPHCRGGFIQSVDPTDFSPEXXXXXXXXXXXXXXXXXXNP 110 SYWCY CTR V + + VVCP C GGF++ V S + NP Sbjct: 7 SYWCYSCTRFVHIQEQNDVVCPRCHGGFVEKVTAPQSSRQ---GFRRRRRNAGNHSAFNP 63 Query: 109 LIVLRNNXXXXXXXXXXXXXXXELYYDDGSGTGIRP 2 +IVLR ELYYD G G+RP Sbjct: 64 VIVLRG-------PGEDEESSFELYYDGFDGEGLRP 92