BLASTX nr result

ID: Mentha24_contig00028784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00028784
         (491 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU36771.1| hypothetical protein MIMGU_mgv1a007628mg [Mimulus...    62   8e-08
ref|XP_004252796.1| PREDICTED: zinc finger CCCH domain-containin...    56   6e-06

>gb|EYU36771.1| hypothetical protein MIMGU_mgv1a007628mg [Mimulus guttatus]
          Length = 401

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/128 (32%), Positives = 59/128 (46%)
 Frame = -2

Query: 388 PSIGSKNPAFPSSMPSTSAQYIPNMVSPPQNCFDSVNIAVHXXXXXXXXXXXXXEMAVPS 209
           P+IGS+     ++   TS  YIPN        +D   I +                  P+
Sbjct: 232 PAIGSQRVGTRNTASITSPHYIPNS-------YDPTKIGIKRTDH-------------PT 271

Query: 208 SLSAPFHPPSRTGXXXXXXXXXXXPVTKDLNYYKSLIQQHGGERRENMPHFAHQGNQQPG 29
            ++ PF+P  +T            P+ KD+NYYKSLIQ HGGE+R+ +P F HQ N+Q  
Sbjct: 272 VVNGPFYPSPQT------RTAMGAPMKKDVNYYKSLIQLHGGEKRDVLPQFVHQDNRQMM 325

Query: 28  TTGQEPSN 5
              Q  SN
Sbjct: 326 INQQPISN 333


>ref|XP_004252796.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Solanum lycopersicum]
          Length = 488

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = -2

Query: 217 VPSSLSAPFHPPSRTGXXXXXXXXXXXPVTKDLNYYKSLIQQHGGERRENMP--HFAHQG 44
           +P ++SAP   P  T            PV +D+NYYKSLIQQHGGER+E +P  +  H+ 
Sbjct: 355 IPEAMSAPLPAPVAT--MSTPTSSMPAPVARDINYYKSLIQQHGGERQETLPPQYNNHRN 412

Query: 43  NQQPGTTGQEPSNN 2
           NQQ G+  QE  N+
Sbjct: 413 NQQLGSV-QESQNS 425


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