BLASTX nr result
ID: Mentha24_contig00028740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00028740
(558 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus... 108 9e-22
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 87 2e-15
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 87 2e-15
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 85 1e-14
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 84 3e-14
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 77 3e-12
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro... 76 7e-12
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro... 76 7e-12
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 76 7e-12
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 76 7e-12
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise... 75 9e-12
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab... 75 9e-12
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 75 1e-11
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps... 75 1e-11
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu... 74 3e-11
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me... 73 6e-11
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana... 73 6e-11
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 72 1e-10
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub... 71 2e-10
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun... 71 2e-10
>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
Length = 1719
Score = 108 bits (270), Expect = 9e-22
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXX----GAGTRXXXXXXXXXXXX 169
+E IENH+++LS++SGIKNF AG
Sbjct: 1326 LEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADEDESGLGTENAGVNDDDDDDDDDKGD 1385
Query: 170 XXXXXXXXXAQKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHS 349
Q+ TD+M+Y + SD ED+ +D +KG SD E+ E+ +T KDE +EH+
Sbjct: 1386 DLGSDVQKRKQQATDDMDYEDGSDGGAAEDD-DSDLEKGKSDVENLEEDETGKDEESEHT 1444
Query: 350 EKEDETCDEQNEYESSTRSKKTDA-------------------KIRRAVKHVFERSSFEV 472
+ +DE + QNE E+ + K+ KIRRA V + + FEV
Sbjct: 1445 DDKDEASNVQNEDEAISEGTKSSVGSSKGKTSFDKSSVELKGKKIRRAFYMVVKGTKFEV 1504
Query: 473 HFKFTTEPHVLLAQIAQKTAQKVFLKRS 556
HF+F EPH+L+AQ+AQKT++KV++++S
Sbjct: 1505 HFEFHEEPHMLIAQLAQKTSKKVYIRKS 1532
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 87.4 bits (215), Expect = 2e-15
Identities = 65/200 (32%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+NHL+ LSKISGIKNF+
Sbjct: 1288 LEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAE 1347
Query: 182 XXXXXAQKK----TDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHS 349
AQK+ +DEM+YG +S+ + E E SA + ED ++ +++ G
Sbjct: 1348 DLGLDAQKRKQQASDEMDYG-DSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGISDP 1406
Query: 350 EKEDETCDEQNEYESSTRSKKTDAKIR---RAVKHVFERSS--------FEVHFKFTTEP 496
+ ED +++ S + KT+AK + RA+K F+R+ FEVHF+FT EP
Sbjct: 1407 KDEDSKVPSKSK-SSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEP 1465
Query: 497 HVLLAQIAQKTAQKVFLKRS 556
H+LLAQIAQK A KV+++ S
Sbjct: 1466 HILLAQIAQKAANKVYIRSS 1485
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 87.4 bits (215), Expect = 2e-15
Identities = 65/200 (32%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+NHL+ LSKISGIKNF+
Sbjct: 1359 LEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAE 1418
Query: 182 XXXXXAQKK----TDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHS 349
AQK+ +DEM+YG +S+ + E E SA + ED ++ +++ G
Sbjct: 1419 DLGLDAQKRKQQASDEMDYG-DSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGISDP 1477
Query: 350 EKEDETCDEQNEYESSTRSKKTDAKIR---RAVKHVFERSS--------FEVHFKFTTEP 496
+ ED +++ S + KT+AK + RA+K F+R+ FEVHF+FT EP
Sbjct: 1478 KDEDSKVPSKSK-SSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEP 1536
Query: 497 HVLLAQIAQKTAQKVFLKRS 556
H+LLAQIAQK A KV+++ S
Sbjct: 1537 HILLAQIAQKAANKVYIRSS 1556
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 84.7 bits (208), Expect = 1e-14
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E IE+HL LSKI+GI+NF + TR
Sbjct: 1291 LEDAIESHLALLSKINGIQNFKTSSESVDSDETEEN---ASSTRREEEMLDDDDDDEDER 1347
Query: 182 XXXXXA------QKKTDEMNYGNESDVDHCEDELSA---DTKKGASDEEDHEDMDTSKDE 334
+ Q+ TDEM+Y ++ D E E +A D K +DE D+ D + + D
Sbjct: 1348 TEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEENGDR 1407
Query: 335 G-AEHSEKEDETCDEQNEYESSTRSKKTDAKIRRAVKHVFERSS------------FEVH 475
G EH+ K T ++ + ++S KT K ++ + ++ S FEVH
Sbjct: 1408 GNEEHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFVDVEGLHFEVH 1467
Query: 476 FKFTTEPHVLLAQIAQKTAQKVFLKRS 556
F+F EPH+LLAQ+AQKTA+KV++K S
Sbjct: 1468 FRFVNEPHILLAQVAQKTAKKVYVKNS 1494
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 83.6 bits (205), Expect = 3e-14
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E IE+HL LSKI+GI+NF + TR
Sbjct: 1291 LEDAIESHLALLSKINGIQNFKTSSESVDSDETEEN---ASSTRHEEEMLDDEDEDERTE 1347
Query: 182 XXXXXAQKK----TDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHS 349
AQK+ TDEM+Y ++ + D E E +A+ + S++ D D ++ G +
Sbjct: 1348 DLSSDAQKRKQQTTDEMDYDDDENED--EAETTAEIEDEKSEQTDEIDNGDEEEIGNRGN 1405
Query: 350 EKEDETCDEQNEYESSTRSKKTDAKIRRAVKH---------------VF---ERSSFEVH 475
E++ + S+T+S K+ K + VK VF E FEVH
Sbjct: 1406 EEQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFVDVEGLHFEVH 1465
Query: 476 FKFTTEPHVLLAQIAQKTAQKVFLKRS 556
F+F EPH+LLAQ+AQKTA+KV++K S
Sbjct: 1466 FRFVNEPHILLAQVAQKTAKKVYIKNS 1492
>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1650
Score = 77.0 bits (188), Expect = 3e-12
Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E IEN++ L+KISGI NF G T
Sbjct: 1263 LEDAIENNIALLAKISGITNFKTDAQPNSSNGAEDDPSNGK-TNDDDDDDGDADDTEGAE 1321
Query: 182 XXXXXAQKK----TDEMNYGNESDVDHCEDELSADTKKGASDEEDHE----DMDTSKDEG 337
AQK D+++Y + + + ED ++ +G D +D+E D D DE
Sbjct: 1322 DLGLDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDLEGVEDAKDNEYVKDDGDGKDDED 1381
Query: 338 AEHSEKEDETCDEQNEY------------ESSTRSKKTDAKIRRAVKHVFERSSFEVHFK 481
+ E + +N+ E +++S+ K R V FE+ FE+HFK
Sbjct: 1382 GKGDEDGSDIEVNENDKKVTLGANYSQGPEENSKSQPVSKKFDRRVYVKFEKRHFEIHFK 1441
Query: 482 FTTEPHVLLAQIAQKTAQKVFLK 550
FT EPH+LLAQIAQKTA+KV ++
Sbjct: 1442 FTGEPHILLAQIAQKTAEKVCIQ 1464
>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
isoform 4 [Theobroma cacao]
Length = 1397
Score = 75.9 bits (185), Expect = 7e-12
Identities = 61/206 (29%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+NHL+ LSKISGIK FM G
Sbjct: 1008 LEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEE 1067
Query: 182 XXXXXA-------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDM-------- 316
Q+ TDEM+Y ++S+V+ E A + ED
Sbjct: 1068 RAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGS 1127
Query: 317 DTSKDEGAEHSEKEDETCDEQNEYE---SSTRSKKTDAKI-----RRAVKHVFERSSFEV 472
D KDE ++ S + + ++ E S + KK AK RA+ + FEV
Sbjct: 1128 DNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEV 1187
Query: 473 HFKFTTEPHVLLAQIAQKTAQKVFLK 550
HFK EPH+LLAQIA+KTA+KV+++
Sbjct: 1188 HFKLKNEPHILLAQIAEKTAKKVYIQ 1213
>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
isoform 3 [Theobroma cacao]
Length = 1400
Score = 75.9 bits (185), Expect = 7e-12
Identities = 61/206 (29%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+NHL+ LSKISGIK FM G
Sbjct: 1011 LEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEE 1070
Query: 182 XXXXXA-------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDM-------- 316
Q+ TDEM+Y ++S+V+ E A + ED
Sbjct: 1071 RAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGS 1130
Query: 317 DTSKDEGAEHSEKEDETCDEQNEYE---SSTRSKKTDAKI-----RRAVKHVFERSSFEV 472
D KDE ++ S + + ++ E S + KK AK RA+ + FEV
Sbjct: 1131 DNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEV 1190
Query: 473 HFKFTTEPHVLLAQIAQKTAQKVFLK 550
HFK EPH+LLAQIA+KTA+KV+++
Sbjct: 1191 HFKLKNEPHILLAQIAEKTAKKVYIQ 1216
>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 75.9 bits (185), Expect = 7e-12
Identities = 61/206 (29%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+NHL+ LSKISGIK FM G
Sbjct: 1300 LEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEE 1359
Query: 182 XXXXXA-------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDM-------- 316
Q+ TDEM+Y ++S+V+ E A + ED
Sbjct: 1360 RAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGS 1419
Query: 317 DTSKDEGAEHSEKEDETCDEQNEYE---SSTRSKKTDAKI-----RRAVKHVFERSSFEV 472
D KDE ++ S + + ++ E S + KK AK RA+ + FEV
Sbjct: 1420 DNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEV 1479
Query: 473 HFKFTTEPHVLLAQIAQKTAQKVFLK 550
HFK EPH+LLAQIA+KTA+KV+++
Sbjct: 1480 HFKLKNEPHILLAQIAEKTAKKVYIQ 1505
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 75.9 bits (185), Expect = 7e-12
Identities = 60/212 (28%), Positives = 88/212 (41%), Gaps = 29/212 (13%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+NH+ LS+ISGIK+F+ R
Sbjct: 1289 LEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDMSHREERDDDNDDDDGERAD 1348
Query: 182 XXXXXAQKK----TDEMNYG-------NESDVDHCEDELSADTKKGASDEEDHEDMDTSK 328
AQK+ TDEM+Y NE + E+E +++ D E D
Sbjct: 1349 DLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEIDQGDNETEISNDVML 1408
Query: 329 DEGAEHS----------EKEDETCDEQNEYESSTRSKKTDAKIRRAVKHVFERS------ 460
D A + K+ + +S + KK AK + + F+R+
Sbjct: 1409 DNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEAR 1468
Query: 461 --SFEVHFKFTTEPHVLLAQIAQKTAQKVFLK 550
FEVHFKFT EPH+LLA+IAQKTA+KV+++
Sbjct: 1469 KMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQ 1500
>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
Length = 1626
Score = 75.5 bits (184), Expect = 9e-12
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E +ENH++FL K++ I +F
Sbjct: 1235 LEDALENHVVFLKKVAVINDFASHSRFEALSEGEEDKASDGAQEAEEEGDDDGGDSDAGE 1294
Query: 182 XXXXXAQKKT----DEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHS 349
QK+ D+M+Y + SD + E+E D K ++E+D +D + ++ +
Sbjct: 1295 DLDSDVQKRRQQARDDMDYEDASDSEQREEE--EDLDKANAEEDDDDDENEWNEKCDDDH 1352
Query: 350 EKEDETCDEQNEYE-----------SSTRSKKTDAKI--------RRAVKHVFERSSFEV 472
+ D+ E+N E ++ S+K D RA+ E S EV
Sbjct: 1353 DDYDQRSSEKNMVEKPILKGRKKSVAAITSEKIDLSTMPSTGKRENRAIYMEIEGLSLEV 1412
Query: 473 HFKFTTEPHVLLAQIAQKTAQKVFLKRS 556
HFKFT+EPHVLLAQ+ QKTA+KV++K++
Sbjct: 1413 HFKFTSEPHVLLAQVVQKTAKKVYVKKT 1440
>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
Length = 1678
Score = 75.5 bits (184), Expect = 9e-12
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Frame = +2
Query: 200 QKK--TDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHSEKED---- 361
QKK TDEM+Y S+ D + S + + ++ED + SK++ E E+ D
Sbjct: 1361 QKKQVTDEMDYEENSE-DETNEPSSISGVEDPEMDSENEDAEVSKEDTPEPQEEADVSKE 1419
Query: 362 ETCDEQNEYESSTRSKKTDAKIRRAV------KHVFERSS---FEVHFKFTTE-PHVLLA 511
ET + Q E ++ K+ K RR +H+F R FEVHF+F T+ PH+LLA
Sbjct: 1420 ETMEPQKEVKAVKNVKEQSKKKRRKFVGATSDRHIFVRGEGEKFEVHFQFATDDPHILLA 1479
Query: 512 QIAQKTAQKVFLKRS 556
QIAQKTAQKV+++ S
Sbjct: 1480 QIAQKTAQKVYIQDS 1494
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 75.1 bits (183), Expect = 1e-11
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+NH+ LSKISGIK F G+ +
Sbjct: 1266 LEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGV 1325
Query: 182 XXXXX-------AQKK----TDEMNYGNESDVDHCEDELSADTK--KGASDEEDHEDM-- 316
AQK+ TDE++Y + + + + ELS + + + SD + +E+
Sbjct: 1326 EDTEGYEDLGSDAQKRKLQGTDEVDYEDGPEEETHDGELSEEIEGDEDGSDVDANENYNN 1385
Query: 317 --DTSKDEGAEHSEKEDETCDEQNEYESSTRSKKTDAKIRRAVKHVFERSSFEVHFKFTT 490
D + EG E K ++QN +S+ T K RA+ + FE+HF+FT
Sbjct: 1386 VTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTG 1445
Query: 491 EPHVLLAQIAQKTAQKVFLK 550
EPH+LL QIAQ+TA+KV ++
Sbjct: 1446 EPHILLTQIAQRTAKKVCIQ 1465
>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
gi|482559195|gb|EOA23386.1| hypothetical protein
CARUB_v10016563mg [Capsella rubella]
Length = 1651
Score = 74.7 bits (182), Expect = 1e-11
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E IE H+ L ++ GI+NF+
Sbjct: 1284 LEDAIEIHMKMLHRMRGIRNFVQDTSPTAGNETDNDNSISGKQTEDDDDGEGTEVDDLGS 1343
Query: 182 XXXXXAQKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHSEKED 361
++ TDEM+Y S+ D + S + + ++ED++ SK EG +KE
Sbjct: 1344 DAQKRKKQATDEMDYEENSE-DETNEPSSISGVEDPEIDNENEDVEVSK-EGTPEQQKEV 1401
Query: 362 ETCDEQNEYESSTRSKKTDAKIRRAVKHVFERSSFEVHFKF-TTEPHVLLAQIAQKTAQK 538
+ + R K A R + E FEVHFKF T+EPH+LLAQIAQKTAQK
Sbjct: 1402 KKVKNVKQQSKKKRRKYVGADEDRHIFVKGEGEKFEVHFKFPTSEPHILLAQIAQKTAQK 1461
Query: 539 VFLKRS 556
V+++ S
Sbjct: 1462 VYIQNS 1467
>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
gi|550335519|gb|ERP58815.1| hypothetical protein
POPTR_0006s05420g [Populus trichocarpa]
Length = 1132
Score = 73.6 bits (179), Expect = 3e-11
Identities = 66/226 (29%), Positives = 95/226 (42%), Gaps = 43/226 (19%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+N+L+ LSKISGIKNF+
Sbjct: 722 LEDAIQNYLVLLSKISGIKNFLKESHSGTPIEAEEDVSGNISREGENDDDSDDEEGEEAD 781
Query: 182 XXXXXAQKK----TDEMNY--GNESDVDHCEDELSADTKKGASDEEDHEDMDTSK----- 328
QK+ TDEM+Y G+E ++ E +LS S E D E D
Sbjct: 782 DLGLDVQKRKQQVTDEMDYDDGSEGVLNEDEGDLSGSQAPSGS-ESDTEPADKESEISNT 840
Query: 329 ---DEGAEHSEK------------EDETCDEQNEYESSTRSKKTDAKIRRA--------- 436
D +E+ EK +T + ++ E ++ K T+ K ++A
Sbjct: 841 DMVDYDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKL 900
Query: 437 VKHVFERS--------SFEVHFKFTTEPHVLLAQIAQKTAQKVFLK 550
VK F+RS FE+H KFT EPH+LLA+IAQKTA+KV ++
Sbjct: 901 VKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQ 946
>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1628
Score = 72.8 bits (177), Expect = 6e-11
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E IENH+ L++ISGIK+F +
Sbjct: 1254 LEDAIENHISLLARISGIKDFQGKSNSSNGLDNDHSNESASNQNGQTDDDDEVGDTEDAE 1313
Query: 182 XXXXXAQKK----TDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHS 349
AQK TDE++Y + + + + E S D + ++D +D +
Sbjct: 1314 EDGFDAQKSKQRATDEVDYDDGPEEETHDGEKSEDVEVSEDGKDDEDDNGVEVNGDDSDI 1373
Query: 350 EKEDETCDEQNEYESSTRSKKTDAKIRRAVKHVFERSS---FEVHFKFTTEPHVLLAQIA 520
E D + E S ++ +K + ++ + V+ ++ FE+HFKF EPH+LLAQIA
Sbjct: 1374 EVNDSDKNVTLEETSKSKKRKFEPASKKYDRRVYVKAGGMRFEIHFKFIGEPHILLAQIA 1433
Query: 521 QKTAQKVFLK 550
Q+TA+KV ++
Sbjct: 1434 QRTAEKVCIQ 1443
>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
190K chain-like protein [Arabidopsis thaliana]
gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
[Arabidopsis thaliana]
Length = 1670
Score = 72.8 bits (177), Expect = 6e-11
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Frame = +2
Query: 200 QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMDTSKDEGAEHSEKEDETCDEQ 379
+++TDEM+Y S+ D + S + + ++ED + SK++ E E+ E E
Sbjct: 1362 KQETDEMDYEENSE-DETNEPSSISGVEDPEMDSENEDTEVSKEDTPEPQEESMEPQKEV 1420
Query: 380 NEYES-STRSKKTDAKIRRAV--KHVF---ERSSFEVHFKFTTE-PHVLLAQIAQKTAQK 538
++ +SKK K RA +H+F E FEVHFKF T+ PH+LLAQIAQ+TAQK
Sbjct: 1421 KGVKNVKEQSKKKRRKFVRAKSDRHIFVKGEGEKFEVHFKFATDDPHILLAQIAQQTAQK 1480
Query: 539 VFLKRS 556
V+++ S
Sbjct: 1481 VYIQNS 1486
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 71.6 bits (174), Expect = 1e-10
Identities = 62/204 (30%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E IE ++ LSKI+GIKNF+
Sbjct: 1267 LEGLIEREMVLLSKINGIKNFVPDSQSKGSSEGDEVSSSRQKENDDDDDEGNDLDVAEDL 1326
Query: 182 XXXXXAQK--KTDEMNYGNESDVDHCEDELS----ADTKKGASDEEDHEDM-DTSKDEGA 340
QK DEM+Y ++S+ D E S ++ +G E + DM + KD +
Sbjct: 1327 GSDMKKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSAS 1386
Query: 341 EHS------------EKEDETCDEQNEYESSTRSKKTDAKIRRAVKHVFERSSFEVHFKF 484
E+ EK ET E+ + +S K+TD I K + FEVHFKF
Sbjct: 1387 ENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKE----NHFEVHFKF 1442
Query: 485 TTEPHVLLAQIAQKTAQKVFLKRS 556
T EPH LL+QI Q+ AQKV ++RS
Sbjct: 1443 TNEPHTLLSQIVQRAAQKVSIQRS 1466
>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
vesca subsp. vesca]
Length = 1673
Score = 70.9 bits (172), Expect = 2e-10
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXX------GAGTRXXXXXXXXXX 163
+E I+NHL+ LSKISGIK+ G G
Sbjct: 1278 LEDAIQNHLVLLSKISGIKDIKADSLPKASNETDEDISFNISQHEGEGGDDDNVDDSGEG 1337
Query: 164 XXXXXXXXXXXAQKKTDEMNYGNESDVDHCEDELSADTKKGASDEE-DHEDMDTSKDEG- 337
++ TDEM Y D EDE + + + E D+ ++D D+
Sbjct: 1338 VEDFGLDAQKQKRQGTDEMEYD-----DDWEDEFNEGRQSDEFENEIDNGELDVEIDKDG 1392
Query: 338 ----AEHSEKEDETCDEQNEYESSTRSKKTDAKIR-------RAVKHVFERSSF------ 466
++ ++K E+C + ++ KKT ++ + + V+ ++R++F
Sbjct: 1393 VTGISDANDKMQESCSTGGISKPHSKGKKTKSRDKIKKKTSAKLVRKEYDRATFVSAKGF 1452
Query: 467 --EVHFKFTTEPHVLLAQIAQKTAQKVFLKRS 556
E+HFKFT EPH+LL QIAQKTA+ V++K S
Sbjct: 1453 HFEIHFKFTNEPHILLDQIAQKTARNVYVKSS 1484
>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
gi|462398594|gb|EMJ04262.1| hypothetical protein
PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 70.9 bits (172), Expect = 2e-10
Identities = 65/218 (29%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
Frame = +2
Query: 2 MEVQIENHLIFLSKISGIKNFMXXXXXXXXXXXXXXXXXGAGTRXXXXXXXXXXXXXXXX 181
+E I+NH++ LSKISGIKNF R
Sbjct: 1210 LEDAIQNHILLLSKISGIKNFTPDSQPKASNETDENLPEKRSQREEEDDDNGGADDGEHG 1269
Query: 182 XXXXX----AQKK----TDEMNY---------------GNESDVDHCEDE--LSADTKKG 286
A K+ TDEM+Y G+ES++D E+E + D + G
Sbjct: 1270 EGVEDFGLDAHKRKLQATDEMDYEDGCDDEVREADLSDGDESEIDEEENEVEIGKDGEIG 1329
Query: 287 ASDEEDH-------EDMDTSKDEGAEHSEKEDETCDEQNEYESSTRSKKTDAKIRRAVKH 445
D D E D +K + E K ++ + + K+TD I + K
Sbjct: 1330 VIDANDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKG 1389
Query: 446 VFERSSFEVHFKFT-TEPHVLLAQIAQKTAQKVFLKRS 556
FEVHF+F EPH+LL+QIAQKTAQKV+++RS
Sbjct: 1390 FH----FEVHFRFADNEPHILLSQIAQKTAQKVYIQRS 1423