BLASTX nr result

ID: Mentha24_contig00028639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00028639
         (322 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365038.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_004233239.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
emb|CBI27156.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_006468486.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
gb|AFK37759.1| unknown [Lotus japonicus]                               59   5e-07
ref|XP_002318901.2| hypothetical protein POPTR_0012s14970g [Popu...    59   9e-07
ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_007142838.1| hypothetical protein PHAVU_007G021100g [Phas...    57   2e-06
ref|XP_007142836.1| hypothetical protein PHAVU_007G021100g [Phas...    57   2e-06
ref|XP_007142837.1| hypothetical protein PHAVU_007G021100g [Phas...    57   3e-06
ref|XP_006605878.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_006365038.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Solanum tuberosum]
          Length = 576

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/67 (53%), Positives = 47/67 (70%)
 Frame = -3

Query: 203 MLSVKYPANYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSR 24
           ML  K P NYI+ + R  + G   +A  ++  P EKWK+DS+FID+ G+ RHFDHKKVSR
Sbjct: 1   MLVSKCPLNYILYEPRISKGGFRWKASASNEVPVEKWKQDSIFIDRRGRFRHFDHKKVSR 60

Query: 23  KKGGSLR 3
           K+ GSLR
Sbjct: 61  KRCGSLR 67


>ref|XP_004233239.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Solanum lycopersicum]
          Length = 576

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = -3

Query: 203 MLSVKYPANYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSR 24
           ML  K P N+I+ + R    G   +A  ++  P EKWK+DS+FID+ G+ R FDHKKVSR
Sbjct: 1   MLVSKCPLNHILFEPRISRGGFRWKASASNEVPVEKWKQDSIFIDRRGRFRQFDHKKVSR 60

Query: 23  KKGGSLR 3
           K+ GSLR
Sbjct: 61  KRCGSLR 67


>ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Vitis vinifera]
          Length = 587

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 36/68 (52%), Positives = 44/68 (64%)
 Frame = -3

Query: 206 FMLSVKYPANYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVS 27
           FML V+  + YI  + R C+  +  RA+  +    EK KRDSLFIDK GK R F+ KK S
Sbjct: 13  FMLIVECTSKYIFVEPRSCKGDVQWRAENTNGGVVEKGKRDSLFIDKRGKFRSFNFKKQS 72

Query: 26  RKKGGSLR 3
           RKKGGSLR
Sbjct: 73  RKKGGSLR 80


>emb|CBI27156.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = -3

Query: 209 IFMLSVKYPANYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKV 30
           + ML V+  + YI  + R C+  +  RA+  +    EK KRDSLFIDK GK R F+ KK 
Sbjct: 50  LHMLIVECTSKYIFVEPRSCKGDVQWRAENTNGGVVEKGKRDSLFIDKRGKFRSFNFKKQ 109

Query: 29  SRKKGGSLR 3
           SRKKGGSLR
Sbjct: 110 SRKKGGSLR 118


>ref|XP_006468486.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Citrus sinensis]
          Length = 597

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/67 (46%), Positives = 41/67 (61%)
 Frame = -3

Query: 203 MLSVKYPANYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSR 24
           ML+     N I+ + R C C    RA  ++    +K+ RD  FIDK GKLR F+HKK+SR
Sbjct: 1   MLTAGNTLNGIVIRPRSCNCDFRCRASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSR 60

Query: 23  KKGGSLR 3
           K+ GSLR
Sbjct: 61  KRCGSLR 67


>gb|AFK37759.1| unknown [Lotus japonicus]
          Length = 500

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/59 (50%), Positives = 40/59 (67%)
 Frame = -3

Query: 179 NYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSRKKGGSLR 3
           N+   + R C      ++  AS    EK+KRDS++IDK GKLR+F+HKK+SRKK GSLR
Sbjct: 16  NHTFIEPRACINEFEWKSNDASGVALEKFKRDSVYIDKAGKLRNFNHKKLSRKKCGSLR 74


>ref|XP_002318901.2| hypothetical protein POPTR_0012s14970g [Populus trichocarpa]
           gi|550327146|gb|EEE97121.2| hypothetical protein
           POPTR_0012s14970g [Populus trichocarpa]
          Length = 576

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/67 (46%), Positives = 40/67 (59%)
 Frame = -3

Query: 203 MLSVKYPANYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSR 24
           ML V+   N+I  + R        R K +S    +KWK D ++IDK GK R FDHKK+SR
Sbjct: 1   MLLVRCTLNHIFIESRIRNGHFRRREKNSSSGDVKKWKSDRVYIDKHGKWRIFDHKKMSR 60

Query: 23  KKGGSLR 3
           K+ GSLR
Sbjct: 61  KRCGSLR 67


>ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like isoform X1 [Glycine max]
          Length = 576

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/67 (44%), Positives = 44/67 (65%)
 Frame = -3

Query: 203 MLSVKYPANYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSR 24
           ML+     ++ + + R C      +A  ++    EK+KRDS++IDK G+LR+F+HKKVSR
Sbjct: 1   MLNSICTLSHTLIEPRACMNDSEWKANDSNSVALEKFKRDSVYIDKNGRLRNFNHKKVSR 60

Query: 23  KKGGSLR 3
           KK GSLR
Sbjct: 61  KKCGSLR 67


>ref|XP_007142838.1| hypothetical protein PHAVU_007G021100g [Phaseolus vulgaris]
           gi|561016028|gb|ESW14832.1| hypothetical protein
           PHAVU_007G021100g [Phaseolus vulgaris]
          Length = 578

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = -3

Query: 179 NYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSRKKGGSLR 3
           ++ + + R C      +   ++    EK+KRDS +IDK GKLR+F+HKKVSRKK GSLR
Sbjct: 11  SHTLIEPRACMNDSEWKTNDSNSVALEKFKRDSAYIDKNGKLRNFNHKKVSRKKSGSLR 69


>ref|XP_007142836.1| hypothetical protein PHAVU_007G021100g [Phaseolus vulgaris]
           gi|561016026|gb|ESW14830.1| hypothetical protein
           PHAVU_007G021100g [Phaseolus vulgaris]
          Length = 576

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = -3

Query: 179 NYIISQQRHCECGLNSRAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSRKKGGSLR 3
           ++ + + R C      +   ++    EK+KRDS +IDK GKLR+F+HKKVSRKK GSLR
Sbjct: 9   SHTLIEPRACMNDSEWKTNDSNSVALEKFKRDSAYIDKNGKLRNFNHKKVSRKKSGSLR 67


>ref|XP_007142837.1| hypothetical protein PHAVU_007G021100g [Phaseolus vulgaris]
           gi|561016027|gb|ESW14831.1| hypothetical protein
           PHAVU_007G021100g [Phaseolus vulgaris]
          Length = 558

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -3

Query: 101 EKWKRDSLFIDKGGKLRHFDHKKVSRKKGGSLR 3
           EK+KRDS +IDK GKLR+F+HKKVSRKK GSLR
Sbjct: 17  EKFKRDSAYIDKNGKLRNFNHKKVSRKKSGSLR 49


>ref|XP_006605878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like isoform X2 [Glycine max]
          Length = 558

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 131 RAKGASVEPTEKWKRDSLFIDKGGKLRHFDHKKVSRKKGGSLR 3
           +A  ++    EK+KRDS++IDK G+LR+F+HKKVSRKK GSLR
Sbjct: 7   KANDSNSVALEKFKRDSVYIDKNGRLRNFNHKKVSRKKCGSLR 49


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