BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00027494
         (817 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352116.1| PREDICTED: DNA-directed RNA polymerase V sub...   175   2e-41
ref|XP_004247645.1| PREDICTED: DNA-directed RNA polymerase II su...   169   1e-39
ref|XP_007034969.1| DNA-directed RNA polymerase II subunit RPB7,...   166   1e-38
ref|XP_007034972.1| RNA polymerase Rpb7-like, N-terminal domain,...   162   1e-37
ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Popu...   158   2e-36
ref|XP_007223531.1| hypothetical protein PRUPE_ppa012042mg [Prun...   157   3e-36
emb|CBI26363.3| unnamed protein product [Vitis vinifera]              147   5e-33
gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus not...   144   3e-32
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   144   3e-32
ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II su...   140   4e-31
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   139   1e-30
ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II su...   136   1e-29
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...   135   1e-29
ref|XP_006282711.1| hypothetical protein CARUB_v10005692mg, part...   132   2e-28
ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-contai...   132   2e-28
ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Caps...   132   2e-28
ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II su...   130   4e-28
ref|XP_007225942.1| hypothetical protein PRUPE_ppa012282mg [Prun...   130   6e-28
ref|XP_006414666.1| hypothetical protein EUTSA_v10026369mg [Eutr...   130   8e-28
ref|XP_006489790.1| PREDICTED: DNA-directed RNA polymerase V sub...   129   1e-27

>ref|XP_006352116.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
           tuberosum]
          Length = 186

 Score =  175 bits (443), Expect = 2e-41
 Identities = 92/176 (52%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
 Frame = -3

Query: 572 VVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGHGDNKSSSEHI 396
           VV+ +  + K+ E+  S VI R   QL+ ++A E  GY L VTK+ S+G G    SS++I
Sbjct: 11  VVVPMEDIKKSGELPGSIVIRRLFSQLTFLRATEDCGYFLKVTKVKSVGSGKLLDSSKYI 70

Query: 395 LFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGENPI 216
           +FPV F  RTF P  GEVL GIV +V  HGVFLK GPMN +YLS +KMPNY YV GENP 
Sbjct: 71  MFPVTFHSRTFLPKTGEVLVGIVIEVCRHGVFLKCGPMNSIYLSVRKMPNYNYVSGENPF 130

Query: 215 FVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVALNGLDGVDL 48
           F+ +D S+IE  V V ++V A+RW +   ++F VLA+ID D LGPV+LNG DG++L
Sbjct: 131 FICNDQSRIENEVAVRFVVYAMRWSRTLVRKFDVLASIDGDSLGPVSLNGFDGLEL 186


>ref|XP_004247645.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Solanum lycopersicum]
          Length = 186

 Score =  169 bits (427), Expect = 1e-39
 Identities = 88/176 (50%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
 Frame = -3

Query: 572 VVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGHGDNKSSSEHI 396
           VV+ +  + K+ E+  + +I R   QL+ ++A E  GY L VTK+ S+G+G    SS++I
Sbjct: 11  VVVPMEDIKKSGELPGNIIIRRLFSQLTFLRATEDCGYFLKVTKVKSVGNGKLLDSSKYI 70

Query: 395 LFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGENPI 216
           +FPV F   TF P  GEVL GIV +V  HGVFLK GPMN +YLS +KMPNY YV GENP 
Sbjct: 71  MFPVTFHSLTFLPKIGEVLVGIVVEVCRHGVFLKCGPMNSIYLSVRKMPNYNYVPGENPF 130

Query: 215 FVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVALNGLDGVDL 48
           F+ +D S+IE  V V ++V A+RW +   ++F VLA+I+ D LGPV+LNG DG++L
Sbjct: 131 FICNDQSRIENEVAVRFVVYAMRWSRTLVRKFDVLASIEGDCLGPVSLNGFDGLEL 186


>ref|XP_007034969.1| DNA-directed RNA polymerase II subunit RPB7, putative isoform 1
           [Theobroma cacao] gi|590658861|ref|XP_007034970.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao]
           gi|590658864|ref|XP_007034971.1| DNA-directed RNA
           polymerase II subunit RPB7, putative isoform 1
           [Theobroma cacao] gi|508713998|gb|EOY05895.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao] gi|508713999|gb|EOY05896.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao] gi|508714000|gb|EOY05897.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao]
          Length = 190

 Score =  166 bits (419), Expect = 1e-38
 Identities = 91/189 (48%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
 Frame = -3

Query: 611 ITDMLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLIS 435
           I DM  EV L   V +    +DK   V    ++   L+ L   +A E +GY LSVT L S
Sbjct: 3   IQDMFSEVELQRDVKVHAGNLDKRGLVSQRSILVLLLEDLFKERASEDHGYFLSVTSLKS 62

Query: 434 IGHGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQK 255
           IG GD    S +++F V F CRTF P  GEVL G+VH + H GVFL+ GP+ + YLSA K
Sbjct: 63  IGKGDVVDESGNMVFTVVFTCRTFKPFKGEVLQGVVHHICHRGVFLRCGPVRIAYLSAWK 122

Query: 254 MPNYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           MPNY YV G  P+F+ DDLSKIE  VVV ++VLAVRW     ++F +LA++++D LGP++
Sbjct: 123 MPNYHYVPGAKPVFISDDLSKIEKDVVVCFLVLAVRWISAS-RDFELLASLNADSLGPIS 181

Query: 74  LNGLDGVDL 48
           L   D VDL
Sbjct: 182 LPWSDEVDL 190


>ref|XP_007034972.1| RNA polymerase Rpb7-like, N-terminal domain, putative isoform 4
           [Theobroma cacao] gi|590658871|ref|XP_007034973.1| RNA
           polymerase Rpb7-like, N-terminal domain, putative
           isoform 4 [Theobroma cacao] gi|508714001|gb|EOY05898.1|
           RNA polymerase Rpb7-like, N-terminal domain, putative
           isoform 4 [Theobroma cacao] gi|508714002|gb|EOY05899.1|
           RNA polymerase Rpb7-like, N-terminal domain, putative
           isoform 4 [Theobroma cacao]
          Length = 185

 Score =  162 bits (410), Expect = 1e-37
 Identities = 89/186 (47%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGH 426
           M  EV L   V +    +DK   V    ++   L+ L   +A E +GY LSVT L SIG 
Sbjct: 1   MFSEVELQRDVKVHAGNLDKRGLVSQRSILVLLLEDLFKERASEDHGYFLSVTSLKSIGK 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           GD    S +++F V F CRTF P  GEVL G+VH + H GVFL+ GP+ + YLSA KMPN
Sbjct: 61  GDVVDESGNMVFTVVFTCRTFKPFKGEVLQGVVHHICHRGVFLRCGPVRIAYLSAWKMPN 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVALNG 66
           Y YV G  P+F+ DDLSKIE  VVV ++VLAVRW     ++F +LA++++D LGP++L  
Sbjct: 121 YHYVPGAKPVFISDDLSKIEKDVVVCFLVLAVRWISAS-RDFELLASLNADSLGPISLPW 179

Query: 65  LDGVDL 48
            D VDL
Sbjct: 180 SDEVDL 185


>ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Populus trichocarpa]
           gi|222863693|gb|EEF00824.1| hypothetical protein
           POPTR_0010s08780g [Populus trichocarpa]
          Length = 189

 Score =  158 bits (400), Expect = 2e-36
 Identities = 82/189 (43%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  EV +   V I    +D+N  V    ++   LK L ++KA  ++GY L+VT L SIG 
Sbjct: 1   MFGEVEVCSTVRIIAENLDRNGLVPQRSIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGK 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G+  + S  +LF V+F CRTF P+ GE+L G+VH+   HGV L+ GP+  ++LSA+KMPN
Sbjct: 61  GEVVNKSGDVLFHVEFKCRTFMPMKGEILQGVVHRTFRHGVLLRCGPVKYIFLSARKMPN 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW---KEFRVLATIDSDGLGPVA 75
           Y Y   ENP+F+ D+L++IE  V+V + VL VRW +  W   ++F +LA++  D LGP++
Sbjct: 121 YQYTSEENPVFLNDELARIENNVLVRFSVLDVRWIEKMWDMRRDFMMLASLVGDSLGPIS 180

Query: 74  LNGLDGVDL 48
           L G D +DL
Sbjct: 181 LCGSDELDL 189


>ref|XP_007223531.1| hypothetical protein PRUPE_ppa012042mg [Prunus persica]
           gi|462420467|gb|EMJ24730.1| hypothetical protein
           PRUPE_ppa012042mg [Prunus persica]
          Length = 186

 Score =  157 bits (398), Expect = 3e-36
 Identities = 89/188 (47%), Positives = 120/188 (63%), Gaps = 3/188 (1%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGH 426
           M  EV L  +V +    +D++K V + F++ R L+ L + KA E  GY L+VT +  IG 
Sbjct: 1   MFYEVELLREVAVLAENLDRDKLVSSRFIVTRLLEGLLSEKADEDLGYFLAVTGIKRIGK 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G+   +S  + FPV F CR F P  GE+L G+V  V   GVFL+ GP+  V+LSA+KMPN
Sbjct: 61  GEVVHNSGDVFFPVVFNCRMFLPRKGEILEGVVDHVHRLGVFLRCGPVKYVFLSARKMPN 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRW--RQDKWKEFRVLATIDSDGLGPVAL 72
           Y YV+GE P+F+ DDL++IE  VVV + V  VRW  R+D  KEF +LAT+  D LGPV  
Sbjct: 121 YRYVVGEKPVFLHDDLARIEKDVVVRFEVFGVRWMRREDITKEFMMLATLQGDLLGPV-- 178

Query: 71  NGLDGVDL 48
            G DG+DL
Sbjct: 179 TGPDGLDL 186


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  147 bits (371), Expect = 5e-33
 Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
 Frame = -3

Query: 608 TDMLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISI 432
           T+M  +V L   V+I    +D    +L   +I R L   SN KA  E GY L+VT L +I
Sbjct: 64  TEMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENI 123

Query: 431 GHGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKM 252
           G G  +  S  +LFPV F C TF    GE+L G+VHKV  HGV L+ GP+  +YLS QKM
Sbjct: 124 GEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKM 183

Query: 251 PNYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           P+Y YV GENP+F+ + LSKIE  VVV ++V+  +W + + +EF+ L +++ D LGP++
Sbjct: 184 PDYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGPLS 241


>gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 202

 Score =  144 bits (364), Expect = 3e-32
 Identities = 87/203 (42%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLA--SFVIERFLKQLSNIKAC-EYGYLLSVTKLISI 432
           M  EV L   V +    +  +  V    SF++ R L+ L   KA  ++GY L+VT L  I
Sbjct: 1   MFSEVELIRDVTVDAENIKSDGLVSRPQSFIMTRLLEDLVREKASKDHGYFLAVTSLKKI 60

Query: 431 GHGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKM 252
           G       S  + FPV F CRTF P  GE+L GIVH +  HGVFL+ GP+   YLSA+KM
Sbjct: 61  GKMKAVEESGDVFFPVVFNCRTFLPYEGEILQGIVHCIYRHGVFLRCGPIKYAYLSARKM 120

Query: 251 PNYFYVLGE-----------NPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW----KEFR 117
           P Y YV G+            P+FV ++ +KIE GVVV +MVL VRW ++ W     EF 
Sbjct: 121 PGYQYVYGQKMACQKCGHDRKPLFVSNEFAKIENGVVVCFMVLGVRWFEN-WGNVKNEFG 179

Query: 116 VLATIDSDGLGPVALNGLDGVDL 48
           VLAT++ D LGP++L+G   +DL
Sbjct: 180 VLATLEGDSLGPISLSGSGELDL 202


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  144 bits (364), Expect = 3e-32
 Identities = 79/177 (44%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  +V L   V+I    +D    +L   +I R L   SN KA  E GY L+VT L +IG 
Sbjct: 1   MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  +  S  +LFPV F C TF    GE+L G+VHKV  HGV L+ GP+  +YLS QKMP+
Sbjct: 61  GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           Y YV GENP+F+ + LSKIE  VVV ++V+  +W + + +EF+ L +++ D LGP++
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGPLS 176


>ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb7-like
           [Fragaria vesca subsp. vesca]
          Length = 188

 Score =  140 bits (354), Expect = 4e-31
 Identities = 81/180 (45%), Positives = 108/180 (60%), Gaps = 5/180 (2%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIE-RFLKQLSNIKAC-EYGYLLSVTKLISIG 429
           M  EV L   VV+   ++DK+    +  VI  + LK L   KA  ++GY L VT L  +G
Sbjct: 1   MYSEVELVRGVVVLAEKLDKDSPFSSKSVITTQLLKDLLKEKASKDHGYFLKVTALKKVG 60

Query: 428 HGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMP 249
            G     S  +LF V F CRTF P+ GE+L G+V+KV + GVF++ GP+N  YLSA+KMP
Sbjct: 61  TGQILDHSRKMLFHVAFSCRTFIPLQGEILEGVVYKVHNLGVFIRCGPLNYAYLSARKMP 120

Query: 248 NYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRW---RQDKWKEFRVLATIDSDGLGPV 78
           NY YV G  P F++ DL+KIE  VVV + VL  RW    ++   EF VL ++  D LGPV
Sbjct: 121 NYHYVAGTKPFFLKGDLAKIEKKVVVRFRVLHARWTAKSREIRNEFVVLGSMVGDSLGPV 180


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  139 bits (351), Expect = 1e-30
 Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  +V L   V+IS   +D    +L   +I R L+  ++ KA  + GY L+VT L SIG 
Sbjct: 1   MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  +  +  +LFPV F   TF    GE+L G+VHKV  HGVF++ GP+  +YLS  KMP+
Sbjct: 61  GKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           Y YV GENP+F+ D  SKIE  VVV ++V+  +W + + +EF+ L +++ D LGPV+
Sbjct: 121 YHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 176


>ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449432630|ref|XP_004134102.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
           gi|449504102|ref|XP_004162253.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
           gi|449504105|ref|XP_004162254.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
          Length = 190

 Score =  136 bits (342), Expect = 1e-29
 Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 5/190 (2%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  EV L   V I+V +  ++      ++I   L+ L   KA  ++GY LSVT L SIG 
Sbjct: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLRSIGK 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  K+ S+ + FP+ F CRTF P  GE+L G+V  +   G+ LK GP+  V+LSA+KMP 
Sbjct: 61  GIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYVFLSARKMPT 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW---KEFRVLATID-SDGLGPV 78
           Y YV GENP+F   + + I   VVV + VL VRW + +    KEF +LA+++ ++ LGP+
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 77  ALNGLDGVDL 48
           +L+  D  DL
Sbjct: 181 SLSDSDEFDL 190


>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449522228|ref|XP_004168129.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 175

 Score =  135 bits (341), Expect = 1e-29
 Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  +V L   V+I    +D    +L   +I R L + +  KA  + GY L+VT L +IG 
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  + + + +LFPV F   TF    GE+L G+VHKV  HGVFL+ GP+  +YLS  KMP+
Sbjct: 61  GKVRQTGD-VLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           Y YV GENP+F+ D LSKIE  VVV ++V+  +W + + +EF+ L +++ D LGPV+
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 175


>ref|XP_006282711.1| hypothetical protein CARUB_v10005692mg, partial [Capsella rubella]
           gi|482551416|gb|EOA15609.1| hypothetical protein
           CARUB_v10005692mg, partial [Capsella rubella]
          Length = 221

 Score =  132 bits (332), Expect = 2e-28
 Identities = 74/172 (43%), Positives = 107/172 (62%), Gaps = 19/172 (11%)
 Frame = -3

Query: 518 VIERFLKQLSNIKAC-EYGYLLSVTKLISIGHGDNK-----------SSSEHILFPVDFC 375
           ++ R L+ L++ KAC ++G+ L +T + SIG   NK             ++ + FPV F 
Sbjct: 46  ILTRLLQVLTHEKACRKHGFYLGITSVKSIGKNKNKIININNNNEDNHQAQILTFPVSFT 105

Query: 374 CRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGEN----PIFVR 207
           CRTF P  G+VL G+V  V  +GVF+ SGP+   YLS  KMP+Y YV  E+    P F +
Sbjct: 106 CRTFLPARGDVLQGVVKMVLSNGVFISSGPLRYAYLSPLKMPDYHYVQSESDDEKPYFQK 165

Query: 206 DDLSKIEIGVVVSYMVLAVRWRQDKWK---EFRVLATIDSDGLGPVALNGLD 60
           DDLSKI +GVVV ++VLAVR+++   K   ++ VLAT++ D LGP++L G D
Sbjct: 166 DDLSKIAVGVVVQFVVLAVRFKERPHKIRNDYYVLATLEGDTLGPISLAGSD 217


>ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-containing family protein
           [Populus trichocarpa] gi|222852388|gb|EEE89935.1| RNA
           polymerase Rpb7 N-terminal domain-containing family
           protein [Populus trichocarpa]
          Length = 176

 Score =  132 bits (332), Expect = 2e-28
 Identities = 74/177 (41%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  +V L   V+I    +D    +L   ++ R L   +   A  + GY L+V+ L SIG 
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGE 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  +  +  +LFPV F   TF    GE+L GIVHKV  HGV L+ GP+  +YLS  KMP+
Sbjct: 61  GKVRQHTGDVLFPVVFSGITFKIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           Y YV GENP+F+ D  SKIE  VVV ++VL  +W + + +EF+ L +++ D LGPV+
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAE-REFQALVSLEGDYLGPVS 176


>ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Capsella rubella]
           gi|482553333|gb|EOA17526.1| hypothetical protein
           CARUB_v10005859mg [Capsella rubella]
          Length = 178

 Score =  132 bits (331), Expect = 2e-28
 Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  +V L   V+I    MD    +L   ++   L   ++ KA  E GY ++VT L  IG 
Sbjct: 1   MFLKVKLPWNVMIPAENMDAKGLMLKRAILVELLNAFASKKATKELGYYVAVTTLDKIGE 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  +  +  +LFPV F   TF    GE++ G+VHKV  HGVF++ GP+  VYLS  KMP+
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYMKMPD 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           Y Y+ GENPIF+ D +S+I++   V  +VL  +W + + +EF+ LA+++ D LGP++
Sbjct: 121 YKYIPGENPIFMNDKMSRIQVEATVRVVVLGTKWMEAE-REFQALASLEGDYLGPIS 176


>ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Solanum lycopersicum]
          Length = 180

 Score =  130 bits (328), Expect = 4e-28
 Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
 Frame = -3

Query: 584 LTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGHGDNKSS 408
           L+  V+I    +D    +L   ++ R L   ++ KA +  GY ++VT L  IG G  +  
Sbjct: 7   LSWNVIIPAENLDVEGLMLQKAIVIRLLDDFASKKASKSLGYFMAVTTLERIGEGKVREH 66

Query: 407 SEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLG 228
           +  +LFPV+F C TF    GE+L G+V K+  HGVFL+ GP + VYLS QKM +Y YV G
Sbjct: 67  TGDVLFPVEFSCITFKIFRGEILDGVVEKILKHGVFLRCGPTDKVYLSHQKMADYKYVPG 126

Query: 227 ENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVALNGL 63
           ENPIF+ + +S+IE   VV ++V+  R+ + + KEF+ + +++ D LGP++ N +
Sbjct: 127 ENPIFMNEKMSRIEKDTVVRFIVVGARYVEAE-KEFQAVVSLEGDYLGPISQNAV 180


>ref|XP_007225942.1| hypothetical protein PRUPE_ppa012282mg [Prunus persica]
           gi|462422878|gb|EMJ27141.1| hypothetical protein
           PRUPE_ppa012282mg [Prunus persica]
          Length = 176

 Score =  130 bits (327), Expect = 6e-28
 Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  +V L   VVI    +D    +L   ++ + L + ++ KA  + GYLL++T L SIG 
Sbjct: 1   MFLKVQLPWNVVIPAESLDIKGLMLQKSIVVQLLDEFASRKATKDLGYLLALTTLESIGE 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  +  +  +LFPV F   TF    GE+  G+VHKV  HGVFL  GP+  +YLS  KMP+
Sbjct: 61  GRVREHTGDVLFPVVFSGVTFKLFRGEIAEGVVHKVLKHGVFLSCGPVENIYLSKLKMPD 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           Y YV GENP+F+   +SKIE G  V ++V+  +W + + +EF+ L  + +D LGPV+
Sbjct: 121 YDYVPGENPVFMNSKMSKIEKGFTVRFIVIGTKWLESE-REFQALVGLHADYLGPVS 176


>ref|XP_006414666.1| hypothetical protein EUTSA_v10026369mg [Eutrema salsugineum]
           gi|557115836|gb|ESQ56119.1| hypothetical protein
           EUTSA_v10026369mg [Eutrema salsugineum]
          Length = 178

 Score =  130 bits (326), Expect = 8e-28
 Identities = 73/177 (41%), Positives = 107/177 (60%), Gaps = 1/177 (0%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  +V L   V+I    MD    +L   ++ + L+  +  KA  E GY L+VT L  IG 
Sbjct: 1   MFLKVELPWNVMIPAENMDAKGLMLKRAILVQLLEAFALKKATVELGYYLTVTTLDKIGE 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  +  +  I+FPV F   TF    GE+L G+VHKV  HGVFL+ GP+  VYLS+ KM +
Sbjct: 61  GKIREQTGEIMFPVVFSGVTFKIFKGEILQGVVHKVLKHGVFLRCGPVENVYLSSAKMLD 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 75
           Y +V GENPIF+ + +S+I++   V ++VLA +W +   KEF+ LA++  D LGP++
Sbjct: 121 YKFVPGENPIFMNEKMSRIQVETTVRFVVLATKWMEVD-KEFQALASLQGDYLGPIS 176


>ref|XP_006489790.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Citrus
           sinensis]
          Length = 182

 Score =  129 bits (325), Expect = 1e-27
 Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
 Frame = -3

Query: 602 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 426
           M  +V L   VV+    +D    +L   ++ R L   +  KA  + GY L+VT L +IG 
Sbjct: 1   MFLKVKLPWNVVVPAENLDAKGPMLQRSIVVRLLDDFARRKATKDLGYFLAVTTLENIGE 60

Query: 425 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 246
           G  + ++  +LFPV F   TF    GEVL G VHKV  HGVFLK GP+  +YL+  KMP+
Sbjct: 61  GRVRENTGEVLFPVVFSGITFKIFRGEVLDGTVHKVLKHGVFLKCGPVENIYLTCSKMPD 120

Query: 245 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVAL-N 69
           Y YV  ENP+F+ +   KIE  VVV  +V+  +W + + +EF+ L +++ D LGPV+  N
Sbjct: 121 YRYVQAENPVFLSEKNPKIEKDVVVRVIVIGTKWLEAE-REFQALVSLEGDFLGPVSCEN 179

Query: 68  GLD 60
            LD
Sbjct: 180 PLD 182