BLASTX nr result
ID: Mentha24_contig00026199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00026199
(554 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 62 1e-07
gb|ABA97403.1| retrotransposon protein, putative, unclassified [... 61 2e-07
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 61 2e-07
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 61 2e-07
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e... 60 5e-07
ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610... 57 2e-06
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 57 4e-06
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 57 4e-06
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 56 7e-06
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 56 7e-06
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 55 9e-06
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 55 9e-06
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +3
Query: 267 EHHIQLKPGLLQPLPIPQVAWTHISMDFVEGLPKS 371
EH++Q PGLL PLPIP++AWTHISMDF+EGLPKS
Sbjct: 945 EHNLQ--PGLLHPLPIPEMAWTHISMDFIEGLPKS 977
Score = 60.5 bits (145), Expect = 3e-07
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +3
Query: 363 PKSVSE--LPTTDSEGRILVAPLTVLDTRTISRSGAEISQLLVQWVNSNSTAATWEDSHY 536
PK V E LP TD G IL P VL+ R I ++ A + Q VQW N +AATWED+ +
Sbjct: 1242 PKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATWEDAAF 1301
Query: 537 ISRKFP 554
IS+ FP
Sbjct: 1302 ISKVFP 1307
>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 562
Score = 61.2 bits (147), Expect = 2e-07
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = +3
Query: 267 EHHIQLKPGLLQPLPIPQVAWTHISMDFVEGLPKS 371
EH++Q PGLL PLP+P++AWTHISMDF+EGLPKS
Sbjct: 358 EHNLQ--PGLLHPLPVPEMAWTHISMDFIEGLPKS 390
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 61.2 bits (147), Expect = 2e-07
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +3
Query: 381 LPTTDSEGRILVAPLTVLDTRTISRSGAEISQLLVQWVNSNSTAATWEDSHYISRKFP 554
LP D+EGRIL PL VLD R I R+ + Q + W N +AATWED+ +I++ FP
Sbjct: 805 LPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFP 862
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 61.2 bits (147), Expect = 2e-07
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +3
Query: 381 LPTTDSEGRILVAPLTVLDTRTISRSGAEISQLLVQWVNSNSTAATWEDSHYISRKFP 554
LP D+EGRIL PL VLD R I R+ + Q + W N +AATWED+ +I++ FP
Sbjct: 584 LPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFP 641
>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 592
Score = 59.7 bits (143), Expect = 5e-07
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = +3
Query: 288 PGLLQPLPIPQVAWTHISMDFVEGLPKS 371
PGLLQP+PIP++AWTHISMDF+EGLPKS
Sbjct: 360 PGLLQPIPIPEMAWTHISMDFIEGLPKS 387
>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
Length = 1274
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 372 VSELPTTDSEGRILVAPLTVLDTRTISRSGAEISQLLVQWVNSNSTAATWEDSHYISRKF 551
++ELPT +G + + P +VLD R + RS Q LVQW NS ATWED+ I KF
Sbjct: 1210 ITELPTIREDGHLQLVPDSVLDRRVVQRSNRPCVQWLVQWSNSFPEDATWEDAVKIQEKF 1269
Query: 552 P 554
P
Sbjct: 1270 P 1270
Score = 56.2 bits (134), Expect = 5e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 267 EHHIQLKPGLLQPLPIPQVAWTHISMDFVEGLPKS 371
+H L PGLLQPLPIP+ WT ISMDF+EGLPKS
Sbjct: 956 KHENVLSPGLLQPLPIPEHNWTDISMDFIEGLPKS 990
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 56.6 bits (135), Expect = 4e-06
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +3
Query: 288 PGLLQPLPIPQVAWTHISMDFVEGLPKS 371
PGLL+PLPIP +AWTHISMDF+EGLP S
Sbjct: 975 PGLLEPLPIPDMAWTHISMDFIEGLPSS 1002
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 56.6 bits (135), Expect = 4e-06
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +3
Query: 288 PGLLQPLPIPQVAWTHISMDFVEGLPKSVSELPTTDSEGRILVAPLTVLDTR 443
PGLL PL IP++AWTHISMDF+EGLPKS + ++ R+ PL ++ R
Sbjct: 1118 PGLLDPLQIPEMAWTHISMDFIEGLPKSQGKDIFMENVYRLHGMPLVIVFDR 1169
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 55.8 bits (133), Expect = 7e-06
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 273 HIQLKPGLLQPLPIPQVAWTHISMDFVEGLPKS 371
HI + PGLL PL IP++AWTHISMDF+EGLPKS
Sbjct: 861 HIHV-PGLLDPLQIPEMAWTHISMDFIEGLPKS 892
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 55.8 bits (133), Expect = 7e-06
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 273 HIQLKPGLLQPLPIPQVAWTHISMDFVEGLPKS 371
HI + PGLL PL IP++AWTHISMDF+EGLPKS
Sbjct: 947 HIHV-PGLLDPLQIPEMAWTHISMDFIEGLPKS 978
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 55.5 bits (132), Expect = 9e-06
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 13/52 (25%)
Frame = +3
Query: 255 ERGVEHHIQLKP-------------GLLQPLPIPQVAWTHISMDFVEGLPKS 371
++GVE+HI+ P GLL PL +P +AWTHISMDFVEGLPKS
Sbjct: 570 KKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKS 621
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 55.5 bits (132), Expect = 9e-06
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +3
Query: 288 PGLLQPLPIPQVAWTHISMDFVEGLPKS 371
PGLL PL IP++AWTHISMDF+EGLPKS
Sbjct: 1137 PGLLDPLQIPEMAWTHISMDFIEGLPKS 1164