BLASTX nr result

ID: Mentha24_contig00025343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00025343
         (658 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm...    58   3e-06
ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymera...    57   7e-06
ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymera...    57   7e-06
gb|EYU20814.1| hypothetical protein MIMGU_mgv1a007273mg [Mimulus...    56   9e-06
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu...    56   9e-06
ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu...    56   9e-06

>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
          gi|223543547|gb|EEF45077.1| conserved hypothetical
          protein [Ricinus communis]
          Length = 473

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -1

Query: 97 SVSLDKWRDYFSTANSDIFSIIEHAIMVAASD 2
          SVSLD WR+YF TANSDIF+II+HAIMVAASD
Sbjct: 3  SVSLDYWRNYFRTANSDIFAIIDHAIMVAASD 34


>ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum tuberosum]
          Length = 455

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -1

Query: 109 MNKISVSLDKWRDYFSTANSDIFSIIEHAIMVAASD 2
           M K S +LDKWRDYF TANSDIF IIE+A+MVAA D
Sbjct: 1   MAKSSGTLDKWRDYFRTANSDIFDIIEYAVMVAAVD 36


>ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum lycopersicum]
          Length = 455

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -1

Query: 109 MNKISVSLDKWRDYFSTANSDIFSIIEHAIMVAASD 2
           M K S +LDKWRDYF TANSDIF IIE+A+MVAA D
Sbjct: 1   MAKSSGTLDKWRDYFRTANSDIFDIIEYAVMVAAVD 36


>gb|EYU20814.1| hypothetical protein MIMGU_mgv1a007273mg [Mimulus guttatus]
          Length = 413

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -1

Query: 106 NKISVSLDKWRDYFSTANSDIFSIIEHAIMVAASD 2
           N  +  LDKWRDYF  ANSDIFSIIEHAI+VAASD
Sbjct: 4   NTPAALLDKWRDYFRGANSDIFSIIEHAIIVAASD 38


>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
          gi|550320725|gb|EEF04988.2| hypothetical protein
          POPTR_0016s03310g [Populus trichocarpa]
          Length = 480

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -1

Query: 97 SVSLDKWRDYFSTANSDIFSIIEHAIMVAASD 2
          SVSLD WRDYF TA+SDIF II+HAI+VAASD
Sbjct: 3  SVSLDYWRDYFRTASSDIFGIIDHAILVAASD 34


>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
          gi|222867860|gb|EEF04991.1| hypothetical protein
          POPTR_0016s03310g [Populus trichocarpa]
          Length = 474

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -1

Query: 97 SVSLDKWRDYFSTANSDIFSIIEHAIMVAASD 2
          SVSLD WRDYF TA+SDIF II+HAI+VAASD
Sbjct: 3  SVSLDYWRDYFRTASSDIFGIIDHAILVAASD 34


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