BLASTX nr result
ID: Mentha24_contig00025171
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha24_contig00025171 (418 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EMS47149.1| DNA-directed RNA polymerase II subunit RPB1 [Trit... 65 7e-09 gb|EMT02256.1| DNA-directed RNA polymerase II subunit RPB1 [Aegi... 65 7e-09 gb|ELU04758.1| hypothetical protein CAPTEDRAFT_91083 [Capitella ... 57 3e-06 >gb|EMS47149.1| DNA-directed RNA polymerase II subunit RPB1 [Triticum urartu] Length = 1846 Score = 65.1 bits (157), Expect(2) = 7e-09 Identities = 45/130 (34%), Positives = 67/130 (51%) Frame = +2 Query: 29 SYIISRIQPFXXXXXXXXXXXXXYLTWVQPYFPWLQPYFPYL*S*FSWI*PYEPCIFSHQ 208 SYI IQP+ +T +QPY LQP L F+ + P + + Sbjct: 1636 SYIALIIQPYVAWLQPDVTELQPDITELQPYVTELQPDITELQPYFTELLPDVTELQPYF 1695 Query: 209 SILFTNFPFLQPNIS*L*PNISKLQSYFP*L*PNFPSIQPYFSCLQPNVSGLQPHFSLLQ 388 + L + LQP + L P++++LQ YF L P+ +QPYF+ L P+V+ LQP+F+ L Sbjct: 1696 TELLPDVTELQPYFTELLPDVTELQPYFTKLLPDVTELQPYFTELLPDVTELQPYFTELL 1755 Query: 389 PHLAFLQPDL 418 P + LQP L Sbjct: 1756 PDVTELQPYL 1765 Score = 20.4 bits (41), Expect(2) = 7e-09 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 Query: 3 PYVGGVAF 26 PYVGG+AF Sbjct: 1594 PYVGGMAF 1601 Score = 60.5 bits (145), Expect = 2e-07 Identities = 42/125 (33%), Positives = 63/125 (50%) Frame = +2 Query: 38 ISRIQPFXXXXXXXXXXXXXYLTWVQPYFPWLQPYFPYL*S*FSWI*PYEPCIFSHQSIL 217 I+ +QP+ Y T + P LQPYF L + + PY F+ L Sbjct: 1660 ITELQPYVTELQPDITELQPYFTELLPDVTELQPYFTELLPDVTELQPY----FTE---L 1712 Query: 218 FTNFPFLQPNIS*L*PNISKLQSYFP*L*PNFPSIQPYFSCLQPNVSGLQPHFSLLQPHL 397 + LQP + L P++++LQ YF L P+ +QPYF+ L P+V+ LQP+ + L P + Sbjct: 1713 LPDVTELQPYFTKLLPDVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYLTELLPEV 1772 Query: 398 AFLQP 412 LQP Sbjct: 1773 TELQP 1777 >gb|EMT02256.1| DNA-directed RNA polymerase II subunit RPB1 [Aegilops tauschii] Length = 1784 Score = 65.1 bits (157), Expect(2) = 7e-09 Identities = 44/130 (33%), Positives = 67/130 (51%) Frame = +2 Query: 29 SYIISRIQPFXXXXXXXXXXXXXYLTWVQPYFPWLQPYFPYL*S*FSWI*PYEPCIFSHQ 208 SYI IQP+ +T +QPYF L P L F+ + P + + Sbjct: 1581 SYIALIIQPYVAWLQPDITELQPDITELQPYFTELLPNVTELQPYFTELLPDVTELQPYF 1640 Query: 209 SILFTNFPFLQPNIS*L*PNISKLQSYFP*L*PNFPSIQPYFSCLQPNVSGLQPHFSLLQ 388 + L + LQP + L P++++LQ YF L P+ +QPYF+ L P+V+GL P + LQ Sbjct: 1641 TELLPDVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTKLLPDVTGLLPDVTELQ 1700 Query: 389 PHLAFLQPDL 418 P+L L P++ Sbjct: 1701 PYLTELLPEV 1710 Score = 20.4 bits (41), Expect(2) = 7e-09 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 Query: 3 PYVGGVAF 26 PYVGG+AF Sbjct: 1539 PYVGGMAF 1546 >gb|ELU04758.1| hypothetical protein CAPTEDRAFT_91083 [Capitella teleta] Length = 120 Score = 57.0 bits (136), Expect = 3e-06 Identities = 36/97 (37%), Positives = 50/97 (51%) Frame = +2 Query: 116 PYFPWLQPYFPYL*S*FSWI*PYEPCIFSHQSILFTNFPFLQPNIS*L*PNISKLQSYFP 295 P+ L P+ L S S + P+ C+ SH S L + L P +S L P+ S L S+ Sbjct: 2 PHASCLMPHASCLMSHVSCLMPHVSCLMSHVSCLMPHDSCLMPLVSCLMPHDSCLLSHVS 61 Query: 296 *L*PNFPSIQPYFSCLQPNVSGLQPHFSLLQPHLAFL 406 L P+ + P+ SCL P+ S L PH S L PH + L Sbjct: 62 WLMPHVSCLMPHASCLIPHASCLMPHASCLMPHASCL 98