BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00025146
         (2068 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   518   e-144
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         512   e-142
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   508   e-141
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   508   e-141
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   506   e-140
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  505   e-140
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   505   e-140
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       503   e-139
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni...   502   e-139
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  501   e-139
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     498   e-138
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   498   e-138
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              496   e-137
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   494   e-137
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   491   e-136
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 486   e-134
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   486   e-134
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 485   e-134
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   485   e-134
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun...   481   e-133

>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  518 bits (1334), Expect = e-144
 Identities = 248/461 (53%), Positives = 328/461 (71%), Gaps = 2/461 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G++N +ADA        + L+ ++ G + +K+QY  
Sbjct: 1093 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAH 1152

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  +   C    + N+F++ DGF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1153 DADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAK 1212

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +F+WP+M RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 1213 KTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFV 1272

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T+R +DSI VV D FSKMAHF+P +KT DAS+IADL+FR+IV+LHG+P T+ SDR
Sbjct: 1273 LGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDR 1332

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWRTLW K+G  L FST+ HPQTDGQTEVVNR+L  +LR++++KN + W+  L
Sbjct: 1333 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1392

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+P+P+S   + DA  RA+ + KLH+ 
Sbjct: 1393 PHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHET 1452

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N +YK   DK R+   F+ GDLVW+HLRKERFP  +  KL PRADGPFKVL 
Sbjct: 1453 TKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLA 1512

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANS 571
            ++ ENAYKI+LP D  V  TFNVADL PY GE EDE E+ +
Sbjct: 1513 KINENAYKIDLPADFGVSPTFNVADLKPYLGE-EDELESRT 1552



 Score =  256 bits (653), Expect = 4e-65
 Identities = 168/542 (30%), Positives = 265/542 (48%), Gaps = 45/542 (8%)
 Frame = -2

Query: 1944 LNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXS------------------- 1822
            LN R  +W+E ++ Y   I +  G+ N VADA        +                   
Sbjct: 1886 LNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSHCNTLGVRGIPPELNQQMEALNL 1945

Query: 1821 ---------TLEVEVLGFDVLKEQYKDDPQFGKIWEECSRESSNRFLLQD-GFLFKEK*L 1672
                     TLE +    D ++E  K+DP    + +   +  +  F+  + G L+    +
Sbjct: 1946 SIVSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRV 2005

Query: 1671 CIPQ-SSLIYSIIKEAHGGGLAGHFGRDKTLALVK*NFYWPRMDRDVARYVERCRICHVA 1495
            C+P    L   I++EAH    + H G  K    +K  ++W  M R++A +V  C +C   
Sbjct: 2006 CVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRV 2065

Query: 1494 KSQAQN-TGLYTPLPIPIAPWEDVSLDFVVGLP*TQRHKDSIMVVFDHFSKMAHFVPSNK 1318
            K++ Q   GL  PL +P   W+++ +DF+ GLP TQ   DSI VV D  +K+A F+P   
Sbjct: 2066 KAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKT 2125

Query: 1317 TMDASNIADLYFRKIVKLHGIPKTMTSDRDSKFMSHFWRTLWRKMGANLQFSTSHHPQTD 1138
            T   + +A+LYF +IV LHG+PK + SDR+S+F SHFW+ L  ++G  L FST++HPQTD
Sbjct: 2126 TYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTD 2185

Query: 1137 GQTEVVNRSLGNLLRSLVRKNTRQWDLALPQAEFAYNRSCSQTTGTSPFKIVYGENSNGP 958
            GQTE +N+ L ++L + V    + WD +LP AEF+YN S   +   +P++ +YG     P
Sbjct: 2186 GQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTP 2245

Query: 957  LDLVPIPTSHAYSGDADDRAKSIKKLHQEVRDRIVKQNERYKINADKHRKPAAFKEGDLV 778
            L    +  S  +  D    A++  +    + D +     R K  AD  R+   F   D V
Sbjct: 2246 LLWDQVGESQVFGTDILREAEAKVR---TIWDNLKVAQSRQKSYADNRRRNLEFAVDDFV 2302

Query: 777  WIHLRKERFPRGKH-----GKLSPRADGPFKVLKRVGENAYKIELPGD--*VFATFNVAD 619
            ++ +      RG H     GKL+PR  GPF+++ R GE AY++ELP     V   F+V+ 
Sbjct: 2303 YLRVTP---LRGVHRFQTKGKLAPRFVGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQ 2359

Query: 618  L---LPYHGEDEDECEANSRASFTAAEANDQGKKSLHKNKGNGPI----VESAENSEKCS 460
            L   L    E  D  +   R   T  E   +   ++ +   N  I    V+ + ++E+ +
Sbjct: 2360 LKKCLRVPSEQADSEQIEVREDLTYVERPVKILDTMERRTRNRVIRFCKVQWSNHAEEEA 2419

Query: 459  NW 454
             W
Sbjct: 2420 TW 2421


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  512 bits (1318), Expect = e-142
 Identities = 248/487 (50%), Positives = 336/487 (68%), Gaps = 2/487 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G++N +ADA        + L+ ++ G + +K+QY  
Sbjct: 1096 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVH 1155

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  +   C      N++++ DGF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1156 DADFKDVLLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAK 1215

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +F+WP+M RDV R V RC  C  AKS+    GLY PLP+P APWED+S+DFV
Sbjct: 1216 KTEDILAGHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFV 1275

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DS+ VV D FSKMAHF+P +KT DA++IADL+FR+IV+LHG+P T+ SDR
Sbjct: 1276 LGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDR 1335

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWRTLW K+G  L FST+ HPQTDGQTEVVNR+L  +LR++++KN + W+  L
Sbjct: 1336 DAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCL 1395

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+P+P+S   + DA  RA+ + KLH+ 
Sbjct: 1396 PHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHET 1455

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N RYK  +DK RK   F+ GDLVW+HLRKERFP  +  KL PRADGPFKVL+
Sbjct: 1456 TKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLE 1515

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANSRASFTAAEANDQGKKSLHK 514
            ++ +NAY+++LP D  V  TFN+ADL PY GE   E E  SR +      ND+    +H 
Sbjct: 1516 KINDNAYRLDLPADFGVSPTFNIADLKPYLGE---EVELESRTTQMQEGENDE---DIHT 1569

Query: 513  NKGNGPI 493
               + PI
Sbjct: 1570 TDASIPI 1576


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  508 bits (1308), Expect = e-141
 Identities = 237/455 (52%), Positives = 326/455 (71%), Gaps = 2/455 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G++N +ADA        S L+ ++ G + +K+QY  
Sbjct: 1137 KLNRRHAKWVEFIETFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVH 1196

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D +F  + + C    + N+F+L DGF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1197 DAEFKDVLQNCKEGRTWNKFVLNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGVK 1256

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +F+WP+M RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 1257 KTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHGLYMPLPVPSVPWEDISMDFV 1316

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DSI VV D FSKMAHF+P +K+ DA N+ADL+FR+I++LHG+P T+ SDR
Sbjct: 1317 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVADLFFREIIRLHGVPNTIVSDR 1376

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWR LW K+G  L FST+ HPQTDGQTEVVNR+L  +LR++++ N + W+  L
Sbjct: 1377 DTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECL 1436

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+P+P+S   + DA +R++ I K+H+ 
Sbjct: 1437 PHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHEL 1496

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N +YK+  DK RK   F  GDLVW+HLRK+RFP  +  KL PRADGPFKVL+
Sbjct: 1497 TKENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLE 1556

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDED 589
            ++ +NAYK+ELP D  V  TFN+ADL PY GE+++
Sbjct: 1557 KINDNAYKLELPADFGVSPTFNIADLKPYLGEEDE 1591


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  508 bits (1307), Expect = e-141
 Identities = 243/461 (52%), Positives = 328/461 (71%), Gaps = 2/461 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G++N +ADA        S L+ ++ G + +KEQY  
Sbjct: 1121 KLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAH 1180

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  +   C    + N+F+L +GF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1181 DDDFKNVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVK 1240

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +F+WP+M RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 1241 KTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFV 1300

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DSI VV D FSKMAHF+P +K+ DA+++ADL+FR+IV+LHG+P T+ SDR
Sbjct: 1301 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDR 1360

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWRTLW K+G    FST+ HPQTDGQTEVVNR+L  +LR++++KN + W+  L
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKFLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1420

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+P PTS   + DA  RA+ + KLH+ 
Sbjct: 1421 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPHPTSERVNFDAKYRAELMLKLHET 1480

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N +YK+   K +K  AF+ GDLVW+HLRK+RFP  +  KL PRADGPFKVL+
Sbjct: 1481 TKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQ 1540

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANS 571
            ++ +NAYK+ELP D  V  TFN+ADL PY GE EDE E+ +
Sbjct: 1541 KINDNAYKLELPADFGVSPTFNIADLKPYLGE-EDELESRT 1580


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  506 bits (1302), Expect = e-140
 Identities = 243/461 (52%), Positives = 324/461 (70%), Gaps = 2/461 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G++N +A+A        + L+ ++ G + +K+QY  
Sbjct: 1072 KLNRRHAKWVEFIESFPYVIKHKKGKENIIANALSRRYTLLTQLDYKIFGLETIKDQYAH 1131

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  +   C    + N+F++ DGF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1132 DADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAK 1191

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +F+WP+M RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 1192 KTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFV 1251

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T+R +DSI VV D FSKM HF+P +KT DAS+IADL+FR+IV+LHG+P T+ SDR
Sbjct: 1252 LGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDR 1311

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWRTLW K+G  L FST+ HPQTDGQ EVVNR+L  +LR++++KN + W+  L
Sbjct: 1312 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQIEVVNRTLSTMLRAVLKKNIKMWEECL 1371

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFA NRS   TT   PF+IVY      P+DL+P+P+S   + DA  RA+ + KLH+ 
Sbjct: 1372 PHIEFACNRSLHSTTKMCPFQIVYSLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHET 1431

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N +YK   DK R+   F+ GDLVW+HLRKERFP  +  KL PRADGPFKVL 
Sbjct: 1432 TKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLA 1491

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANS 571
            ++ ENAYKI+LP D  V  TFNVADL PY GE EDE E+ +
Sbjct: 1492 KINENAYKIDLPADFGVSPTFNVADLKPYLGE-EDELESRT 1531


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  505 bits (1301), Expect = e-140
 Identities = 238/455 (52%), Positives = 323/455 (70%), Gaps = 2/455 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G+ N +ADA        S L+ ++ G + +K+QY  
Sbjct: 1152 KLNRRHAKWVEFIETFPYVIKHKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVH 1211

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  + E C    + N+F++ +GF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1212 DADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMGHFGVK 1271

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            K   ++  +F+WPRM RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 1272 KMEDVLATHFFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFV 1331

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DSI VV D FSKMAHF+P +K+ DA+N+ADL+FR+I++LHG+P T+ SDR
Sbjct: 1332 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDR 1391

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWR LW K+G  L FST+ HPQTDGQTEVVNRSL  +LR++++ N + W+  L
Sbjct: 1392 DAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECL 1451

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+PIP+S   + DA +RA+ I K+H+ 
Sbjct: 1452 PHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHEL 1511

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N RYK+  DK RK   F  GDLVW+HLRK+RFP  +  KL PRA GPFKVL+
Sbjct: 1512 TKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLE 1571

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDED 589
            ++ +NAY++ELP D  V  TFN+ADL PY GE+++
Sbjct: 1572 KINDNAYRLELPADFGVSPTFNIADLKPYLGEEDE 1606


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  505 bits (1300), Expect = e-140
 Identities = 241/461 (52%), Positives = 327/461 (70%), Gaps = 2/461 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G++N +ADA        S L+ ++ G + +KEQY  
Sbjct: 1121 KLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAH 1180

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  +   C    + N+F+L +GF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1181 DDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVK 1240

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +F+WP+M RDV R+V RC  C  AK +    GLY PLP+P  PWED+S+DFV
Sbjct: 1241 KTEDILADHFFWPKMRRDVERFVARCTTCQKAKLRLNPHGLYMPLPVPSVPWEDISMDFV 1300

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DSI VV D FSKMAHF+P +K+ DA+++ADL+FR+IV+LHG+P T+ SDR
Sbjct: 1301 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDR 1360

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWRTLW K+G  L FST+ HPQTDGQTEVVNR+L  +LR++++KN + W+  L
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1420

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+P+PTS   + DA   A+ + KLH+ 
Sbjct: 1421 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELMLKLHET 1480

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N +YK+   K +K  AF+ GDLVW+HLRK+RFP  +  KL PRADGPFKVL+
Sbjct: 1481 TKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQ 1540

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANS 571
            ++ +N YK+ELP D  V  TFN+ADL PY GE EDE E+ +
Sbjct: 1541 KINDNTYKLELPADFGVSPTFNIADLKPYLGE-EDELESRT 1580


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  503 bits (1296), Expect = e-139
 Identities = 241/461 (52%), Positives = 327/461 (70%), Gaps = 2/461 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            K NRRHAKWVEF++ + + IKHK G++N +ADA        S L+ ++ G + +KEQY  
Sbjct: 1121 KHNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAH 1180

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  +   C    + N+F+L +GF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1181 DDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVHMLLLQEAHGGGLMGHFGVK 1240

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            K   ++  +F+WP+  RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 1241 KMEDILADHFFWPKKRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFV 1300

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DSI VV D FSKMAHF+P +K+ DA+++ADL+FR+IV+LHG+P T+ SDR
Sbjct: 1301 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDR 1360

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWRTLW K+G  L FST+ HPQTDGQTEVVNR+L  +LR++++KN + W+  L
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1420

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+P+PTS   + DA  RA+ + KLH+ 
Sbjct: 1421 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELMLKLHET 1480

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N +YK+   K +K  AF+ GDLVW+HLRK+RFP  +  KL PRADGPFKVL+
Sbjct: 1481 TKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQ 1540

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANS 571
            ++ +NAYK+ELP D  V  TFN+ADL PY GE EDE E+ +
Sbjct: 1541 KINDNAYKLELPADFGVSPTFNIADLKPYLGE-EDELESRT 1580


>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  502 bits (1293), Expect = e-139
 Identities = 239/461 (51%), Positives = 327/461 (70%), Gaps = 2/461 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G++N + DA        S L+ ++ G + +KEQY  
Sbjct: 1017 KLNRRHAKWVEFIESFPYVIKHKKGKENVIVDALSRRYAMLSQLDFKIFGLETIKEQYAH 1076

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  +   C    + N+F+L +GF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1077 DDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVHMLLLQEAHGGGLMGHFGVK 1136

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  + +WP+M RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 1137 KTEDILADHLFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFV 1196

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DSI VV D FSKMAHF+P +K+ DA+++ADL+FR+IV+LHG+P T+ SDR
Sbjct: 1197 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDR 1256

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWRTLW K+G  L FST+ HPQTDGQTEVVNR++  +LR++++KN + W+  L
Sbjct: 1257 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEECL 1316

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+P+PT    + DA  RA+ + KLH+ 
Sbjct: 1317 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTLERVNFDAKYRAELMLKLHET 1376

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N +YK+   K +K  AF+ GDLVW+HLRK+RFP  +  KL PRADGPF+VL+
Sbjct: 1377 TKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLPPRADGPFQVLQ 1436

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANS 571
            ++ +NAYK+ELP D  V  TFN+ADL PY GE EDE E+ +
Sbjct: 1437 KINDNAYKLELPADFGVSPTFNIADLKPYLGE-EDELESRT 1476


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  501 bits (1290), Expect = e-139
 Identities = 237/455 (52%), Positives = 322/455 (70%), Gaps = 2/455 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IK K G+ N +ADA        S L+ ++ G + +K+QY  
Sbjct: 1149 KLNRRHAKWVEFIETFPYVIKDKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVH 1208

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  + E C    + N+F++ +GF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 1209 DADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMGHFGVK 1268

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            K   ++  +F+WPRM RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 1269 KMEDVLATHFFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFV 1328

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DSI VV D FSKMAHF+P +K+ DA+N+ADL+FR+I++LHG+P T+ SDR
Sbjct: 1329 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDR 1388

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWR LW K+G  L FST+ HPQTDGQTEVVNRSL  +LR++++ N + W+  L
Sbjct: 1389 DAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECL 1448

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNRS   TT   PF+IVYG     P+DL+PIP+S   + DA +RA+ I K+H+ 
Sbjct: 1449 PHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHEL 1508

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N RYK+  DK RK   F  GDLVW+HLRK+RFP  +  KL PRA GPFKVL+
Sbjct: 1509 TKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLE 1568

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDED 589
            ++ +NAY++ELP D  V  TFN+ADL PY GE+++
Sbjct: 1569 KINDNAYRLELPXDFGVSPTFNIADLKPYLGEEDE 1603


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  498 bits (1283), Expect = e-138
 Identities = 239/479 (49%), Positives = 336/479 (70%), Gaps = 2/479 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + +K+K G++N VADA        + LEV+V G + +KE Y  
Sbjct: 1096 KLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSA 1155

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F + + +C+      ++ + DGFLF+   LC+P  S+   +++E H GGL GHFG  
Sbjct: 1156 DLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWR 1215

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +FYWP+M RDV R V+RC  CH AKS+    GLYTPLP+P APWED+S+DFV
Sbjct: 1216 KTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFV 1275

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T+R +DSI VV D FSKMAHF+P +K+ DAS+IA L+F +IV+LHG+PKT+ SDR
Sbjct: 1276 LGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDR 1335

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+S+FW+TLW K+G  L FST+ HPQTDGQTEVVNR+L  LLR+L++KN ++W+  L
Sbjct: 1336 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 1395

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNR+   TT   PF++VYG     P+DL+P+P       +A  RA  +KK+H++
Sbjct: 1396 PHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEK 1455

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I K+++ Y   A+K+RK   F+ GDLVW+HLRK+RFP+ +  KL PR DGPF+VL 
Sbjct: 1456 TKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLS 1515

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANSRASFTAAEANDQGKKSLH 517
            ++ +NAYKIELP D  V +TFNVADL P+ G ++ E   +SR++      +D+   ++H
Sbjct: 1516 KINDNAYKIELPEDYGVSSTFNVADLTPFFGLEDSE---SSRSTPFQEGEDDEDIPTVH 1571


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 681

 Score =  498 bits (1283), Expect = e-138
 Identities = 239/479 (49%), Positives = 336/479 (70%), Gaps = 2/479 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + +K+K G++N VADA        + LEV+V G + +KE Y  
Sbjct: 64   KLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSA 123

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F + + +C+      ++ + DGFLF+   LC+P  S+   +++E H GGL GHFG  
Sbjct: 124  DLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWR 183

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +FYWP+M RDV R V+RC  CH AKS+    GLYTPLP+P APWED+S+DFV
Sbjct: 184  KTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFV 243

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T+R +DSI VV D FSKMAHF+P +K+ DAS+IA L+F +IV+LHG+PKT+ SDR
Sbjct: 244  LGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDR 303

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+S+FW+TLW K+G  L FST+ HPQTDGQTEVVNR+L  LLR+L++KN ++W+  L
Sbjct: 304  DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 363

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNR+   TT   PF++VYG     P+DL+P+P       +A  RA  +KK+H++
Sbjct: 364  PHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEK 423

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I K+++ Y   A+K+RK   F+ GDLVW+HLRK+RFP+ +  KL PR DGPF+VL 
Sbjct: 424  TKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLS 483

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANSRASFTAAEANDQGKKSLH 517
            ++ +NAYKIELP D  V +TFNVADL P+ G ++ E   +SR++      +D+   ++H
Sbjct: 484  KINDNAYKIELPEDYGVSSTFNVADLTPFFGLEDSE---SSRSTPFQEGEDDEDIPTVH 539


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  496 bits (1278), Expect = e-137
 Identities = 238/454 (52%), Positives = 322/454 (70%), Gaps = 1/454 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLN+RHA+WVEF++ + + IK+K G+ N VADA        S+L+ ++LGF+ +K  Y +
Sbjct: 1285 KLNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYAN 1344

Query: 1767 DPQFGKIWEECSRESSNRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRDK 1588
            D  F KI+  C + +  ++   DGFLF +  LCIP SSL    I+EAHGGGL GHFG  K
Sbjct: 1345 DSDFEKIYSSCEKFAFGKYYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGLMGHFGVSK 1404

Query: 1587 TLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFVV 1408
            T+ +++ +F+WP M RDV R  ERC  C  AK+++Q  GLYTPLPIP  PW D+S+DFVV
Sbjct: 1405 TIKVMQDHFHWPHMKRDVERICERCPTCKQAKAKSQPHGLYTPLPIPSHPWNDISMDFVV 1464

Query: 1407 GLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDRD 1228
            GLP T+  KDSI VV D FSKMAHF+P +KT DA +IA+L+FR++V+LHG+PKT+ SDRD
Sbjct: 1465 GLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRD 1524

Query: 1227 SKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLALP 1048
            +KF+S+FW+TLW K+G  L FST+ HPQTDGQTEVVNR+L  LLR+L++KN + W+  LP
Sbjct: 1525 TKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLP 1584

Query: 1047 QAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQEV 868
              EFAYN S    +  SPF+IVYG N   PLDL+P+P S   S D   +A+ ++++H++ 
Sbjct: 1585 HVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQA 1644

Query: 867  RDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLKR 688
            +  I ++ ++Y  +A+K RK   F EGDLVWIHLRKERFP+ +  KL  R DGPFKVLKR
Sbjct: 1645 KKNIEEKTKQYAKHANKSRKEVIFNEGDLVWIHLRKERFPKERKSKLMSRIDGPFKVLKR 1704

Query: 687  VGENAYKIELPGD-*VFATFNVADLLPYHGEDED 589
            +  NAY ++L G   V  +FNVADL P+  ++ D
Sbjct: 1705 INNNAYSLDLQGKYNVSNSFNVADLFPFIADNTD 1738


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
            gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
            Japonica Group]
          Length = 681

 Score =  494 bits (1271), Expect = e-137
 Identities = 238/479 (49%), Positives = 333/479 (69%), Gaps = 2/479 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + +K+K G++N VADA        + LEV+V G + +KE Y  
Sbjct: 64   KLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVPGIESIKELYPA 123

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F + + +C+      ++ + DGFLF+   LC+P  S+   +++E H GGL GHFG  
Sbjct: 124  DLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWR 183

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +FYWP+M RDV R V+RC  CH AKS+    GLYTPLP+P APWED+S+DFV
Sbjct: 184  KTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFV 243

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T+R +DSI VV D FSKMAHF+P +K+ DAS+IA L+F +IV+LHG+PKT+ SDR
Sbjct: 244  LGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDR 303

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+S+FW+TLW K+G  L FST+ HPQTDGQTEVVNR+L  LLR+L++KN ++W+  L
Sbjct: 304  DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 363

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYNR+   TT   PF++VYG     P+DL+P+P       +A   A  +KK+H++
Sbjct: 364  PHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEASKHATYVKKIHEK 423

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I K+++ Y   A+K RK   F+ GDLVW+HLRK+RFP+ +  KL PR DGPF+VL 
Sbjct: 424  TKEAIEKRSKYYAAWANKDRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLS 483

Query: 690  RVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANSRASFTAAEANDQGKKSLH 517
            ++ +NAYKIELP D  V  TFNVADL P+ G ++ E   +SR++      +D+   ++H
Sbjct: 484  KINDNAYKIELPEDYGVSPTFNVADLTPFFGLEDSE---SSRSTPFQEGEDDEDIPTVH 539


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 889

 Score =  491 bits (1264), Expect = e-136
 Identities = 228/434 (52%), Positives = 311/434 (71%), Gaps = 1/434 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KLNRRHAKWVEF++ + + IKHK G++N +ADA        S L+ ++ G + +KEQY  
Sbjct: 434  KLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAH 493

Query: 1767 DPQFGKIWEECSRESS-NRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRD 1591
            D  F  +   C    + N+F+L +GF+F+   LCIP SS+   +++EAHGGGL GHFG  
Sbjct: 494  DDDFKDVLLNCMEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVK 553

Query: 1590 KTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFV 1411
            KT  ++  +F+WP+M RDV R+V RC  C  AKS+    GLY PLP+P  PWED+S+DFV
Sbjct: 554  KTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFV 613

Query: 1410 VGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDR 1231
            +GLP T++ +DSI VV D FSKMAHF+P +K+ DA+++ADL+FR+IV+LHG+P T+ SDR
Sbjct: 614  LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDR 673

Query: 1230 DSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLAL 1051
            D+KF+SHFWRTLW K+G  L FST+ HPQTDGQTEVVNR+L  +LR++++KN + W+  L
Sbjct: 674  DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 733

Query: 1050 PQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQE 871
            P  EFAYN S   TT   PF+IVYG     P+DL+P+PTS   + DA  RA+ + KLH+ 
Sbjct: 734  PHVEFAYNHSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKHRAELMLKLHET 793

Query: 870  VRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLK 691
             ++ I + N +YK+   K +K  AF+ GDLVW+HLRK+RFP  +  KL PRADGPFKVL+
Sbjct: 794  TKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLQPRADGPFKVLQ 853

Query: 690  RVGENAYKIELPGD 649
            ++ +NAYK+ELP D
Sbjct: 854  KINDNAYKLELPAD 867


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  486 bits (1252), Expect = e-134
 Identities = 248/487 (50%), Positives = 328/487 (67%), Gaps = 4/487 (0%)
 Frame = -2

Query: 1950 NKLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYK 1771
            +KLN RHAKWVEFLQ +TF  K+K G++N VADA        S +   VLGF+ +KE YK
Sbjct: 989  HKLNFRHAKWVEFLQSFTFSSKYKEGKKNVVADALSRRHSLLSVMSNRVLGFEFMKELYK 1048

Query: 1770 DDPQFGKIW---EECSRESSNRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHF 1600
            +DP F + W    E  +   +++LLQ+GFLF+   LC+P+ S    +I+E H GG+ GHF
Sbjct: 1049 EDPDFSEEWITQTEGHKNQGSKYLLQEGFLFQGNKLCVPRGSYRDLLIREVHSGGMGGHF 1108

Query: 1599 GRDKTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSL 1420
            G  KTL +++  FYWPRM  DV   + RC  C ++KS  Q  G YTPLP+P  PWED+S+
Sbjct: 1109 GVQKTLEILQDQFYWPRMMGDVQIILRRCSKCQLSKSSFQ-PGPYTPLPVPSKPWEDLSM 1167

Query: 1419 DFVVGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMT 1240
            DF+V LP TQR KDS+MVV D FSKMAHFV   KT DA ++A+L+ ++IV+LHG+PKT+ 
Sbjct: 1168 DFIVALPRTQRGKDSVMVVVDRFSKMAHFVACKKTEDAVSVAELFLKEIVRLHGVPKTIV 1227

Query: 1239 SDRDSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWD 1060
            SDRD+KFM +FW+TLW+ +   L FSTSHHPQTDGQTEV NR+LG +LR LV K+ + WD
Sbjct: 1228 SDRDTKFMGYFWKTLWKLLKTKLLFSTSHHPQTDGQTEVTNRTLGRILRCLVSKSLKDWD 1287

Query: 1059 LALPQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKL 880
            L L  AEFA+NR+ S  TG SPF++VYG N   PLDL  +P  +  + DA  RA+ + KL
Sbjct: 1288 LKLAAAEFAFNRAPSTATGHSPFEVVYGVNPLMPLDLSSVPKEN-INLDAMKRAEQLLKL 1346

Query: 879  HQEVRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFK 700
            H+ V+ +I + NE+Y+ +    +    F+ GDLVWIHLRKERFP  +  KL PR+DGPF+
Sbjct: 1347 HETVKRQIERTNEQYQKHLKVPKGKKEFEPGDLVWIHLRKERFPAKRKNKLMPRSDGPFE 1406

Query: 699  VLKRVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANSRASFTAAEANDQGKKS 523
            V++++G +AYKI+LPGD  V  TFNV DL PY+ +  DE     R S       D G   
Sbjct: 1407 VVEKIGPSAYKIDLPGDYGVHGTFNVGDLSPYYEDSGDEEVTGLRTSPVQPGGVDAGA-- 1464

Query: 522  LHKNKGN 502
               N+GN
Sbjct: 1465 --SNQGN 1469


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  486 bits (1252), Expect = e-134
 Identities = 244/483 (50%), Positives = 329/483 (68%), Gaps = 3/483 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KL+RRHAKWVEF++ + + I +K G++N VADA        STL  ++LGFD +K  Y +
Sbjct: 1047 KLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLTSKLLGFDQIKFLYAN 1106

Query: 1767 DPQFGKIWEECSRESSNRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRDK 1588
            D  FG+I+ EC      +F LQD FLFKE  LC+P  SL    ++EAH GGL GHFG  K
Sbjct: 1107 DSDFGEIFAECKLGPFEKFNLQDEFLFKENKLCVPNCSLRELFVREAHCGGLMGHFGVPK 1166

Query: 1587 TLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFVV 1408
            TL ++  +FYWP M +DV +    C  C  AKS+    GLYTPLP+  +PW D+S+DF++
Sbjct: 1167 TLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPLPVSNSPWIDISMDFIL 1226

Query: 1407 GLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDRD 1228
            GLP T+  KDSI VV D FSKMA F+P  KT DAS++ADL+ +++VKLHGIP+T+ SDRD
Sbjct: 1227 GLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRD 1286

Query: 1227 SKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLALP 1048
            +KF+SHFWR LW K+G  L FSTS HPQTDGQTEVVNR+LGN+LR++++     W+  LP
Sbjct: 1287 AKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLP 1346

Query: 1047 QAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQEV 868
              EFAYNR+   +TG +PF++VYG N   PLDL+P+PT+   + D   +A  +KK+H++ 
Sbjct: 1347 IVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQT 1406

Query: 867  RDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLKR 688
            R  I K+N+   +  +K RK   FK GDLVW+H+RKERFP  +  KL PR  GP+KVL+R
Sbjct: 1407 RLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLER 1466

Query: 687  VGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANSRASFTAAEAND--QGKKSLH 517
            +G+NAYK++LPG+  V ATFNV+DL  Y      + + +SR +    E ND  QG  +  
Sbjct: 1467 IGDNAYKLDLPGEFQVSATFNVSDLSHY------DADLDSRTNSLQEEGNDSIQGSSTPL 1520

Query: 516  KNK 508
            K+K
Sbjct: 1521 KDK 1523


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  485 bits (1249), Expect = e-134
 Identities = 251/497 (50%), Positives = 325/497 (65%), Gaps = 5/497 (1%)
 Frame = -2

Query: 1950 NKLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYK 1771
            +KLN RHAKWVEFLQ + F  K+  G+ N VADA        S +E  VLGF+ +KE Y 
Sbjct: 977  HKLNHRHAKWVEFLQSFNFSSKYIEGKDNIVADALSRRFIMLSFMEQRVLGFEYMKELYV 1036

Query: 1770 DDPQFGKIWEECSR---ESSNRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHF 1600
            +DP F   WE       +  +++L+Q+GFLF    LC+P+      +I+E H  GLAGHF
Sbjct: 1037 EDPDFKGEWELLQSGQIKLKSKYLVQNGFLFFGNKLCVPRGPYRNLLIREVHSNGLAGHF 1096

Query: 1599 GRDKTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSL 1420
            G  KT  +++  FYWP+M  DV   ++RC  C  +KS  Q TG YTPLP+P  PWED+S+
Sbjct: 1097 GIQKTYDILQEQFYWPKMLGDVQDVIKRCAPCQQSKSYFQ-TGPYTPLPVPNQPWEDISM 1155

Query: 1419 DFVVGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMT 1240
            DF+V LP TQR KDSIMVV D FSKMAHF+   KT DA+++A+LYF+++VKLHGIPK++ 
Sbjct: 1156 DFIVALPRTQRGKDSIMVVVDRFSKMAHFIACKKTEDATSVAELYFKEVVKLHGIPKSIV 1215

Query: 1239 SDRDSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWD 1060
            SDRDSKFMSHFWRTLW+ +   L FSTSHHPQTDGQTEV N++LG +LR  V ++ + WD
Sbjct: 1216 SDRDSKFMSHFWRTLWKLLKTRLLFSTSHHPQTDGQTEVTNKTLGRILRCTVARSLKDWD 1275

Query: 1059 LALPQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKL 880
            L L QAEFA+NR+ S TTG SPF++VYG N   P DL PI   +    DA  R + +  +
Sbjct: 1276 LKLAQAEFAFNRAPSTTTGKSPFEVVYGVNPMMPTDLAPI-KRNTIDYDAKKRVEQMLHI 1334

Query: 879  HQEVRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFK 700
            H++V+ +I K NE +K  +   +   +F+ GDLVWIHLRKERFP  +  KL PRADGPF+
Sbjct: 1335 HEQVKKQIEKANEAHKGKSKGVKGTKSFEPGDLVWIHLRKERFPEKRKNKLMPRADGPFE 1394

Query: 699  VLKRVGENAYKIELPGD-*VFATFNVADLLPYHGE-DEDECEANSRASFTAAEANDQGKK 526
            VL++ G NAYKI LPG+  V  TFNV DL PY+ E +ED+ E      F   E      +
Sbjct: 1395 VLEKFGSNAYKINLPGEYGVHGTFNVGDLSPYYEEIEEDKLEDLRANPFQEGEIETNQTE 1454

Query: 525  SLHKNKGNGPIVESAEN 475
              H + G GP      N
Sbjct: 1455 KGHISPGFGPCTRLRSN 1471


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  485 bits (1249), Expect = e-134
 Identities = 244/483 (50%), Positives = 328/483 (67%), Gaps = 3/483 (0%)
 Frame = -2

Query: 1947 KLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLKEQYKD 1768
            KL+RRHAKWVEF++ + + I +K G++N VADA        STL  ++LGFD +K  Y +
Sbjct: 1047 KLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLTSKLLGFDQIKFLYAN 1106

Query: 1767 DPQFGKIWEECSRESSNRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAGHFGRDK 1588
            D  FG+I+ EC      +F LQD FLFKE  LC+P  SL    ++EAH GGL GHFG  K
Sbjct: 1107 DSDFGEIFAECKLGPFEKFNLQDEFLFKENKLCVPNCSLRELFVREAHCGGLMGHFGVPK 1166

Query: 1587 TLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDVSLDFVV 1408
            TL ++  +FYWP M +DV +    C  C  AKS+    GLYTPLP+   PW D+S+DF++
Sbjct: 1167 TLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPLPVSNFPWIDISMDFIL 1226

Query: 1407 GLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKTMTSDRD 1228
            GLP T+  KDSI VV D FSKMA F+P  KT DAS++ADL+ +++VKLHGIP+T+ SDRD
Sbjct: 1227 GLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRD 1286

Query: 1227 SKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQWDLALP 1048
            +KF+SHFWR LW K+G  L FSTS HPQTDGQTEVVNR+LGN+LR++++     W+  LP
Sbjct: 1287 AKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLP 1346

Query: 1047 QAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIKKLHQEV 868
              EFAYNR+   +TG +PF++VYG N   PLDL+P+PT+   + D   +A  +KK+H++ 
Sbjct: 1347 IVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQT 1406

Query: 867  RDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGPFKVLKR 688
            R  I K+N+   +  +K RK   FK GDLVW+H+RKERFP  +  KL PR  GP+KVL+R
Sbjct: 1407 RLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLER 1466

Query: 687  VGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANSRASFTAAEAND--QGKKSLH 517
            +G+NAYK++LPG+  V ATFNV+DL  Y      + + +SR +    E ND  QG  +  
Sbjct: 1467 IGDNAYKLDLPGEFQVSATFNVSDLSHY------DADLDSRTNSLQEEGNDSIQGSSTPL 1520

Query: 516  KNK 508
            K+K
Sbjct: 1521 KDK 1523


>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
            gi|462405925|gb|EMJ11389.1| hypothetical protein
            PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  481 bits (1239), Expect = e-133
 Identities = 237/474 (50%), Positives = 317/474 (66%), Gaps = 2/474 (0%)
 Frame = -2

Query: 1962 ISFGNKLNRRHAKWVEFLQGYTFHIKHKSGRQNQVADAXXXXXXXXSTLEVEVLGFDVLK 1783
            I+    +++ HA+WV FLQ ++F IKH SG+ N+VADA         TL  EV+GF+ LK
Sbjct: 995  INSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQEVVGFECLK 1054

Query: 1782 EQYKDDPQFGKIWEECS-RESSNRFLLQDGFLFKEK*LCIPQSSLIYSIIKEAHGGGLAG 1606
            E Y+ D  FG+IW +C+ +E    + L +G+LFK   LCIP SSL   +I++ HGGGL+G
Sbjct: 1055 ELYEGDADFGEIWTKCTNQEPMADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSG 1114

Query: 1605 HFGRDKTLALVK*NFYWPRMDRDVARYVERCRICHVAKSQAQNTGLYTPLPIPIAPWEDV 1426
            H GRDKT+A ++  FYWP++ RDV   V +C  C  +K Q QNTGLY PLP+P   W+D+
Sbjct: 1115 HLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDL 1174

Query: 1425 SLDFVVGLP*TQRHKDSIMVVFDHFSKMAHFVPSNKTMDASNIADLYFRKIVKLHGIPKT 1246
            ++DFV+GLP TQR  DS+ VV D FSKMAHF+   KT DASNIA L+FR++V+LHG+P +
Sbjct: 1175 AMDFVLGLPRTQRGVDSVFVVVDRFSKMAHFIACRKTADASNIAKLFFREVVRLHGVPTS 1234

Query: 1245 MTSDRDSKFMSHFWRTLWRKMGANLQFSTSHHPQTDGQTEVVNRSLGNLLRSLVRKNTRQ 1066
            +TSDRD+KF+SHFW TLWR  G  L  S++ HPQTDGQTEV NR+LGN++RS+  +  +Q
Sbjct: 1235 ITSDRDTKFLSHFWITLWRLFGTTLNRSSTAHPQTDGQTEVTNRTLGNMVRSVCGEKPKQ 1294

Query: 1065 WDLALPQAEFAYNRSCSQTTGTSPFKIVYGENSNGPLDLVPIPTSHAYSGDADDRAKSIK 886
            WD ALPQ EFAYN +    TG SPF IVY    N  +DLV +P     S  A + A+ + 
Sbjct: 1295 WDYALPQVEFAYNSAVHSATGKSPFSIVYTAMPNHVVDLVKLPRGQQTSVAAKNLAEEVV 1354

Query: 885  KLHQEVRDRIVKQNERYKINADKHRKPAAFKEGDLVWIHLRKERFPRGKHGKLSPRADGP 706
             +  EV+ ++ + N +YK  ADKHR+   F+EGD V I LRKERFP G + KL P+  GP
Sbjct: 1355 AVRDEVKQKLEQTNAKYKAAADKHRRVKVFQEGDSVMIFLRKERFPVGTYSKLKPKKYGP 1414

Query: 705  FKVLKRVGENAYKIELPGD-*VFATFNVADLLPYHGEDEDECEANSRASFTAAE 547
            +KVLKR+ +NAY IELP    +   FNVADL  +  ++ +  +    A F A E
Sbjct: 1415 YKVLKRINDNAYVIELPDSMGISNIFNVADLYEFREDEVEGTDVEQMADFIAVE 1468