BLASTX nr result
ID: Mentha24_contig00024859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00024859
(873 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 218 2e-79
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 194 8e-70
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 153 7e-35
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 151 3e-34
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 151 3e-34
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 151 4e-34
gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlise... 150 5e-34
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 150 6e-34
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 150 8e-34
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 148 3e-33
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 148 3e-33
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 148 3e-33
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 148 3e-33
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 148 3e-33
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 148 3e-33
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 148 3e-33
ref|XP_002312652.1| RNA recognition motif-containing family prot... 148 3e-33
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 146 9e-33
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A... 144 3e-32
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 141 4e-31
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 218 bits (556), Expect(2) = 2e-79
Identities = 122/221 (55%), Positives = 130/221 (58%), Gaps = 3/221 (1%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
LIQYG+VKEIKFFDERASGKSKGYCQVEFYDP+AA+ACK+GM GH FNGRACVV +A P
Sbjct: 251 LIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNGRACVVTYANPQ 310
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA-XXXXXXXXXXXXXQP 359
T KQMGASY NK RNP+ND AGRGNG NYPSGDA Q
Sbjct: 311 TSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSGDAGRNFGRGGGWGRGNQA 369
Query: 360 PNKXXXXXXXXXXXXI-NKNMI-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 533
PN+ + NKNMI
Sbjct: 370 PNRGPGAGPIRGRGGMGNKNMIGNAPGAGGGGAYGQGLNGPGFGGPPGMMHPQGMMGPGF 429
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
DLAFMGRG GYG FSGP F GMLPPF GVNSMGLPGVAPHV
Sbjct: 430 DLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSMGLPGVAPHV 470
Score = 105 bits (262), Expect(2) = 2e-79
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PHSGMWND NMG WGGEEHGRESSYGGEDNASEYGYGE SHDK RSSAA R
Sbjct: 495 PHSGMWNDPNMGGWGGEEHGRESSYGGEDNASEYGYGEGSHDKSVRSSAAPR 546
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 194 bits (493), Expect(2) = 8e-70
Identities = 107/222 (48%), Positives = 122/222 (54%), Gaps = 4/222 (1%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG VKEIKFFDERASGKSKGYCQVEF+DP++A+ACKEGMNG++FNGRACVVAFATP
Sbjct: 251 LTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGRACVVAFATPQ 310
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDAXXXXXXXXXXXXXQPP 362
TIKQMG+SY NK R P+N+ GRG P P
Sbjct: 311 TIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGGPNYTPGDAGRNFGRGSWGRGGPGMP 370
Query: 363 NKXXXXXXXXXXXXI-NKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-- 533
N+ + +KNM+
Sbjct: 371 NRGPGGGPVRGRGAMGSKNMMVNPGAGNGAGGAFGQGLAGPAFGGPPAGLMHPQGMMGPG 430
Query: 534 -DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +FMGRGAGYG FSGPAFPGM+PPF VN MGLPGVAPHV
Sbjct: 431 FDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHV 472
Score = 97.4 bits (241), Expect(2) = 8e-70
Identities = 45/55 (81%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH GMW DT+ G WGGEEHGR ESSYGGEDNASEYGYGE SHDKGARSSA SR
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSR 551
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein,
putative [Ricinus communis]
Length = 644
Score = 153 bits (387), Expect = 7e-35
Identities = 74/104 (71%), Positives = 79/104 (75%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG VKEIKFFDERASGKSKGYCQVEFYD +AA+ACKEGMNGH FNGRACVVAFA+
Sbjct: 240 LSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVAFASQQ 299
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 314
T+KQMGASY NK R P+ND AGRG NY GDA
Sbjct: 300 TLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDA 343
Score = 83.6 bits (205), Expect(2) = 3e-29
Identities = 38/54 (70%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGE--EHGRESSYGGEDNASEYGYGEASHDKGARSSAASR 873
P++GMW+DT+MG WG E RESSYGG+D ASEYGYGE +H+KGARSSAASR
Sbjct: 491 PNAGMWSDTSMGGWGEEPGRRTRESSYGGDDGASEYGYGEVNHEKGARSSAASR 544
Score = 72.4 bits (176), Expect(2) = 3e-29
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRGAGYG F+GP FPGMLP FP VN+MGL GVAPHV
Sbjct: 426 DPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHV 466
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 151 bits (382), Expect = 3e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FNGR CVVAFA+P
Sbjct: 253 LSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQ 312
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
T+KQMGASY NK R P+ND GRG NY SGD
Sbjct: 313 TLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGD 355
Score = 89.7 bits (221), Expect(2) = 6e-31
Identities = 40/55 (72%), Positives = 47/55 (85%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH GMW D++MG W GEEHGR ESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 504 PHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 558
Score = 72.0 bits (175), Expect(2) = 6e-31
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHV
Sbjct: 439 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHV 479
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 151 bits (382), Expect = 3e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FNGR CVVAFA+P
Sbjct: 253 LSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQ 312
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
T+KQMGASY NK R P+ND GRG NY SGD
Sbjct: 313 TLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGD 355
Score = 90.1 bits (222), Expect(2) = 5e-31
Identities = 40/55 (72%), Positives = 47/55 (85%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH GMW D++MG W GEEHGR ESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 504 PHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 558
Score = 72.0 bits (175), Expect(2) = 5e-31
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHV
Sbjct: 439 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHV 479
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 151 bits (381), Expect = 4e-34
Identities = 70/103 (67%), Positives = 82/103 (79%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+VKEIKFFDERASGKSKGYCQVEF+DP+AA+ACKEGM+G+ FNGRACVVAFA+P
Sbjct: 224 LSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVAFASPQ 283
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
T+KQMGASY +K R P+N+ GRG G NY +GD
Sbjct: 284 TLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGD 326
Score = 89.7 bits (221), Expect(2) = 7e-30
Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 3/54 (5%)
Frame = +1
Query: 721 HSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
H+GMWND +MG WGG+EHGR ESSYGG+D ASEYGYGEA+H+KG RS+A SR
Sbjct: 476 HAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSR 529
Score = 68.6 bits (166), Expect(2) = 7e-30
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG GYG F GPAFPGML FP VN+MGL GVAPHV
Sbjct: 410 DPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHV 450
>gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlisea aurea]
Length = 508
Score = 150 bits (380), Expect = 5e-34
Identities = 77/106 (72%), Positives = 83/106 (78%), Gaps = 2/106 (1%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
LIQYGKVKEIKFFDERASGKSKGYCQVEF+DP+AA ACKEGMNG+ FNGRACVVAFATP
Sbjct: 235 LIQYGKVKEIKFFDERASGKSKGYCQVEFFDPAAAHACKEGMNGYVFNGRACVVAFATPQ 294
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRN-PVND-AAGRGNGANYPSGDA 314
TIKQMGASY N+ RN +ND AGRG G N+ GDA
Sbjct: 295 TIKQMGASYMNRNQGQPQAQFPGRNAAMNDGGAGRGVGTNFSGGDA 340
Score = 79.7 bits (195), Expect(2) = 1e-19
Identities = 36/42 (85%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
Frame = +3
Query: 534 DLAFMGRGAGYGN-FSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
DLAFMGRGAGYG F+GPAFPGMLPPFP VN++GLPGVAPHV
Sbjct: 413 DLAFMGRGAGYGGGFTGPAFPGMLPPFPAVNTLGLPGVAPHV 454
Score = 44.3 bits (103), Expect(2) = 1e-19
Identities = 20/30 (66%), Positives = 24/30 (80%), Gaps = 3/30 (10%)
Frame = +1
Query: 718 PHSGMWNDTNM-GAWGGEEHGR--ESSYGG 798
P+SG+WND ++ G WGGEE GR ESSYGG
Sbjct: 479 PYSGLWNDASVGGGWGGEEQGRGPESSYGG 508
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 150 bits (379), Expect = 6e-34
Identities = 73/104 (70%), Positives = 81/104 (77%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+VKEIKFFDERASGKSKGYCQVEFYDP++A+ACKEGM+G+ FNGRACVVAFA+P
Sbjct: 251 LSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYMFNGRACVVAFASPQ 310
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 314
T+KQMGASY NK R P ND GRG NY SGDA
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSGDA 353
Score = 88.2 bits (217), Expect(2) = 7e-29
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH GMW DT+MG WGG+EHGR ESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 500 PHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 553
Score = 66.6 bits (161), Expect(2) = 7e-29
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG YG F GP FPGMLP FP VN++GL GVAPHV
Sbjct: 435 DPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHV 475
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 150 bits (378), Expect = 8e-34
Identities = 74/104 (71%), Positives = 80/104 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+VKEIKFFDERASGKSKGYCQVEFYD SAA+ACKEGMNG+ FNGRACVVAFA+P
Sbjct: 249 LSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRACVVAFASPQ 308
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 314
T+KQMGASY NK R P+ND GRG G N GDA
Sbjct: 309 TLKQMGASYMNK--TQAQSQSQGRRPMNDGVGRGGGMNMQGGDA 350
Score = 85.1 bits (209), Expect(2) = 5e-28
Identities = 37/54 (68%), Positives = 44/54 (81%), Gaps = 3/54 (5%)
Frame = +1
Query: 721 HSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
H+GMW DT+MG WGGEEHGR ESSYGG+D AS+YGYGE +H+K RS+ ASR
Sbjct: 497 HAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASR 550
Score = 67.0 bits (162), Expect(2) = 5e-28
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG YG FSG AFPGM+P FP VN+MGL GVAPHV
Sbjct: 431 DPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHV 471
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 148 bits (373), Expect = 3e-33
Identities = 69/103 (66%), Positives = 79/103 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+VKEIKFFDERASGKSKGYCQVE+YD +AA ACKEGM+GH FNGRACVVAFA+P
Sbjct: 243 LSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFNGRACVVAFASPQ 302
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
T+KQMGA+Y +K R P+ND GRG N+ SGD
Sbjct: 303 TLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSGD 345
Score = 78.6 bits (192), Expect = 3e-12
Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
Frame = +1
Query: 727 GMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
GMWND ++G WGGEEHGR ESSYGG+D ASEYGYG+ +H+KG R + R
Sbjct: 493 GMWNDPSIGGWGGEEHGRRTRESSYGGDDGASEYGYGDTNHEKGGRERGSER 544
Score = 70.5 bits (171), Expect = 8e-10
Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 18/79 (22%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVXXS-------------RNE 674
D +MGRG GYG F+GPAFPGMLP FP VN+MG VAPHV +
Sbjct: 425 DPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPHVNPAFFGRGMTNNGMGMVGS 484
Query: 675 SQWNGHDGDCWD-----GW 716
S +GH G W+ GW
Sbjct: 485 SLMDGHQGGMWNDPSIGGW 503
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 148 bits (373), Expect = 3e-33
Identities = 69/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+ KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FNGR CVVAFA+P
Sbjct: 250 LSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQ 309
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
T+KQMGASY NK P+ND GRG NY SGD
Sbjct: 310 TLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGD 352
Score = 89.7 bits (221), Expect(2) = 6e-31
Identities = 40/55 (72%), Positives = 47/55 (85%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH GMW D++MG W GEEHGR ESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 501 PHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 555
Score = 72.0 bits (175), Expect(2) = 6e-31
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHV
Sbjct: 436 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHV 476
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 148 bits (373), Expect = 3e-33
Identities = 69/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+ KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FNGR CVVAFA+P
Sbjct: 250 LSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQ 309
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
T+KQMGASY NK P+ND GRG NY SGD
Sbjct: 310 TLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGD 352
Score = 89.7 bits (221), Expect(2) = 6e-31
Identities = 40/55 (72%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH GMW D++MG W GEEHGR ESSYGG+D AS+YGYGEASH+KGARS+ ASR
Sbjct: 501 PHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEASHEKGARSTTASR 555
Score = 72.0 bits (175), Expect(2) = 6e-31
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHV
Sbjct: 436 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHV 476
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 148 bits (373), Expect = 3e-33
Identities = 71/104 (68%), Positives = 80/104 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+ FNGRACVVAFA+P
Sbjct: 251 LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQ 310
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 314
T+KQMGASY NK R P N+ GRG NY SGDA
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 87.4 bits (215), Expect(2) = 1e-28
Identities = 40/55 (72%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH+GMW D +MG WGG+EHGR ESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 499 PHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Score = 66.6 bits (161), Expect(2) = 1e-28
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHV
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 148 bits (373), Expect = 3e-33
Identities = 71/104 (68%), Positives = 80/104 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+ FNGRACVVAFA+P
Sbjct: 251 LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQ 310
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 314
T+KQMGASY NK R P N+ GRG NY SGDA
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 87.4 bits (215), Expect(2) = 1e-28
Identities = 40/55 (72%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH+GMW D +MG WGG+EHGR ESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 499 PHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Score = 66.6 bits (161), Expect(2) = 1e-28
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHV
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 148 bits (373), Expect = 3e-33
Identities = 71/104 (68%), Positives = 80/104 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+ FNGRACVVAFA+P
Sbjct: 251 LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQ 310
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 314
T+KQMGASY NK R P N+ GRG NY SGDA
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 87.4 bits (215), Expect(2) = 1e-28
Identities = 40/55 (72%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH+GMW D +MG WGG+EHGR ESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 499 PHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Score = 66.6 bits (161), Expect(2) = 1e-28
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHV
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 148 bits (373), Expect = 3e-33
Identities = 71/104 (68%), Positives = 80/104 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+ FNGRACVVAFA+P
Sbjct: 251 LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQ 310
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 314
T+KQMGASY NK R P N+ GRG NY SGDA
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 87.4 bits (215), Expect(2) = 1e-28
Identities = 40/55 (72%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
PH+GMW D +MG WGG+EHGR ESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 499 PHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Score = 66.6 bits (161), Expect(2) = 1e-28
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHV
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHV 474
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 148 bits (373), Expect = 3e-33
Identities = 69/101 (68%), Positives = 79/101 (78%)
Frame = +3
Query: 9 QYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPHTI 188
Q+G+VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMNGH FNGR CVVAFA+P T+
Sbjct: 239 QFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQTL 298
Query: 189 KQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
KQMGASY NK R +ND AGRG AN+ SGD
Sbjct: 299 KQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGD 339
Score = 71.6 bits (174), Expect(2) = 3e-20
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG GYG F+GP FPGMLP FP VNSMGL GVAPHV
Sbjct: 421 DPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHV 461
Score = 54.3 bits (129), Expect(2) = 3e-20
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +1
Query: 724 SGMWNDTNMGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGARSSAASR 873
SGM + N G W ESSY G++ ASEYGYGE +H+KGARSS ASR
Sbjct: 481 SGM-DGPNPGMW-------ESSYDGDEGASEYGYGEGNHEKGARSSGASR 522
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 146 bits (369), Expect = 9e-33
Identities = 68/103 (66%), Positives = 79/103 (76%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L Q+G++KEIKFFDERASGKSKGYCQV+FYDP+AASACKEGM+G+ FNGRACVVAFA+
Sbjct: 240 LSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFASSQ 299
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
T+KQMG SY NK R P+ND AGRG N+ GD
Sbjct: 300 TLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGD 342
Score = 73.9 bits (180), Expect = 7e-11
Identities = 38/80 (47%), Positives = 42/80 (52%), Gaps = 18/80 (22%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVXXS-------------RNE 674
D +MGRG GYG F GP FPGMLP FPGVN+MGL GVAPHV +
Sbjct: 426 DPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMATNGMGMMGS 485
Query: 675 SQWNGHDGDCWD-----GWT 719
S GH W+ GWT
Sbjct: 486 SGMEGHHAPMWNDPSMAGWT 505
Score = 68.6 bits (166), Expect = 3e-09
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Frame = +1
Query: 721 HSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYG-YGEASHDKGARSSAASR 873
H+ MWND +M W GEE RESSYGG+D SEYG YGEA+H+K RSSAA R
Sbjct: 492 HAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEANHEKPVRSSAAPR 546
>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
gi|548855834|gb|ERN13697.1| hypothetical protein
AMTR_s00049p00146760 [Amborella trichopoda]
Length = 659
Score = 144 bits (364), Expect = 3e-32
Identities = 66/103 (64%), Positives = 77/103 (74%)
Frame = +3
Query: 3 LIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPH 182
L QYG+VK++KFFDERASGKSKGYCQVEFYDP+AA+ACKE MNGH FNGRACVVAFA+ H
Sbjct: 263 LSQYGRVKDLKFFDERASGKSKGYCQVEFYDPAAAAACKESMNGHVFNGRACVVAFASQH 322
Query: 183 TIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
T+KQ+ +Y NK R P+ND GR G +Y GD
Sbjct: 323 TLKQLTTNYLNKTQAQAQAQSQGRRPMNDGGGRAGGPSYQGGD 365
Score = 63.9 bits (154), Expect(2) = 4e-20
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Frame = +3
Query: 540 AFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVXXS-------------RNESQ 680
A +GRG+GYG FSGP FPGMLP F + ++GLPGVAPHV +
Sbjct: 446 AHLGRGSGYGGFSGPHFPGMLPSFSPMGTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGA 505
Query: 681 WNGHDGDCW 707
+GH G W
Sbjct: 506 MDGHHGGMW 514
Score = 61.6 bits (148), Expect(2) = 4e-20
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Frame = +1
Query: 721 HSGMWNDTNMGA---WGGEEHGR---ESSYGGEDNASEYGYGEASHDKGARSSAASR 873
H GMW D++MG WG EEHGR ESSYG +D AS+YGYG+ H++G S R
Sbjct: 510 HGGMWGDSSMGGGVGWGNEEHGRRTRESSYG-DDGASDYGYGDGGHERGGGRSNPGR 565
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 141 bits (355), Expect = 4e-31
Identities = 67/101 (66%), Positives = 76/101 (75%)
Frame = +3
Query: 9 QYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPHTI 188
QYG+VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMN H FNGR CVVAFA+ T+
Sbjct: 194 QYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTL 253
Query: 189 KQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 311
KQMGASY +K R +ND GRG ANY SGD
Sbjct: 254 KQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGD 294
Score = 73.6 bits (179), Expect(2) = 1e-24
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = +1
Query: 718 PHSGMWNDTNMGAWGGE--EHGRESSYGGEDNASEYGYGEASHDKGARSSAASR 873
P+ G W DT+MG WG E RESSY G++ ASEYGYGE +H+KGARSS ASR
Sbjct: 441 PNPGKWPDTSMGGWGEEPGRRTRESSYDGDEGASEYGYGEGNHEKGARSSGASR 494
Score = 67.4 bits (163), Expect(2) = 1e-24
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +3
Query: 534 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHV 656
D +MGRG GYG F G FPGMLP FP VNSMGL GVAPHV
Sbjct: 376 DPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHV 416