BLASTX nr result

ID: Mentha24_contig00024693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00024693
         (377 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37251.1| hypothetical protein MIMGU_mgv1a012596mg [Mimulus...    82   8e-14
ref|XP_006382426.1| hypothetical protein POPTR_0005s02060g [Popu...    71   1e-10
ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|...    67   2e-09
ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...    65   1e-08
ref|XP_007031094.1| DNA polymerase III polC-type, putative isofo...    60   3e-07
ref|XP_007031093.1| DNA polymerase III polC-type, putative isofo...    60   3e-07
emb|CBI39565.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_004494552.1| PREDICTED: DNA polymerase III PolC-type-like...    57   3e-06

>gb|EYU37251.1| hypothetical protein MIMGU_mgv1a012596mg [Mimulus guttatus]
          Length = 245

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
 Frame = +3

Query: 147 MKTIAMCFSLMPFPRCRLHSLANCWWENLYKFRXXXXXXXXXXYKVLCSNNFEIEGGY-- 320
           MK IAMCFSL+ FPRCR+HSLAN  +EN  K            Y+VLCSNN++ +GG+  
Sbjct: 1   MKAIAMCFSLLQFPRCRIHSLANSCFENFNKL-GKRSGVSSTSYRVLCSNNYDPQGGHNS 59

Query: 321 SRRWTRRSI----NSQTGGN 368
           SR+WTRR+I    N+ TGGN
Sbjct: 60  SRKWTRRTINTNANTNTGGN 79


>ref|XP_006382426.1| hypothetical protein POPTR_0005s02060g [Populus trichocarpa]
           gi|550337786|gb|ERP60223.1| hypothetical protein
           POPTR_0005s02060g [Populus trichocarpa]
          Length = 337

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = +3

Query: 147 MKTIAMCFSLMPFPRCRLHSLANCWWENLYKFRXXXXXXXXXXYKVLCSNNFEIEGGYSR 326
           M+T+ MCFS++  PRCR H+LAN WWE+               +++L S    +EGGYS+
Sbjct: 4   MRTVLMCFSILQVPRCRTHTLANFWWESSRSLN--RTCGRNSSFRLLGSKANGMEGGYSK 61

Query: 327 RWTRRSINSQTGGNKE 374
           RW RR ++++TGG  +
Sbjct: 62  RWIRRPVSTKTGGESQ 77


>ref|XP_002512483.1| exonuclease, putative [Ricinus communis]
           gi|223548444|gb|EEF49935.1| exonuclease, putative
           [Ricinus communis]
          Length = 334

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/76 (39%), Positives = 47/76 (61%)
 Frame = +3

Query: 147 MKTIAMCFSLMPFPRCRLHSLANCWWENLYKFRXXXXXXXXXXYKVLCSNNFEIEGGYSR 326
           M+ I MCFS++  PRCRLH++AN W E+ +             +++L S +  +EGGYSR
Sbjct: 1   MRIIPMCFSILQVPRCRLHTIANFWQESFHS--SARKCGNKSSFRLLASKSDGLEGGYSR 58

Query: 327 RWTRRSINSQTGGNKE 374
           RW RR ++++T G  +
Sbjct: 59  RWIRRPVSTKTEGTNK 74


>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
           vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED:
           DNA polymerase III polC-type-like isoform 1 [Vitis
           vinifera]
          Length = 337

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/76 (39%), Positives = 47/76 (61%)
 Frame = +3

Query: 147 MKTIAMCFSLMPFPRCRLHSLANCWWENLYKFRXXXXXXXXXXYKVLCSNNFEIEGGYSR 326
           M+T+ MCFS++  PRCR+H+LA+ W E+ +             +K+L S+   +EGG SR
Sbjct: 1   MRTVPMCFSILQVPRCRIHTLASFWRESFHSL--GSTCRSSSSFKLLGSHTNGLEGGNSR 58

Query: 327 RWTRRSINSQTGGNKE 374
           RWTRR I +++ G  +
Sbjct: 59  RWTRRPITTKSEGRNK 74


>ref|XP_007031094.1| DNA polymerase III polC-type, putative isoform 2 [Theobroma cacao]
           gi|508719699|gb|EOY11596.1| DNA polymerase III
           polC-type, putative isoform 2 [Theobroma cacao]
          Length = 244

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +3

Query: 147 MKTIAMCFSLMPFPRCRLHSLANCWWENLYKFRXXXXXXXXXXYKVLCSNNFEIEGGYSR 326
           M+++A+C S++  PR  +H LAN  WE+ +             +K+L S  + +EGGYSR
Sbjct: 1   MRSVAICLSMLQAPRGGIHGLANFCWESFHSLSGRRVNSSS--FKLLASKTYGLEGGYSR 58

Query: 327 RWTRRSINSQTGG-NKEN 377
           RW RR + ++  G NK N
Sbjct: 59  RWIRRPVTTKIDGRNKTN 76


>ref|XP_007031093.1| DNA polymerase III polC-type, putative isoform 1 [Theobroma cacao]
           gi|508719698|gb|EOY11595.1| DNA polymerase III
           polC-type, putative isoform 1 [Theobroma cacao]
          Length = 338

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +3

Query: 147 MKTIAMCFSLMPFPRCRLHSLANCWWENLYKFRXXXXXXXXXXYKVLCSNNFEIEGGYSR 326
           M+++A+C S++  PR  +H LAN  WE+ +             +K+L S  + +EGGYSR
Sbjct: 1   MRSVAICLSMLQAPRGGIHGLANFCWESFHSLSGRRVNSSS--FKLLASKTYGLEGGYSR 58

Query: 327 RWTRRSINSQTGG-NKEN 377
           RW RR + ++  G NK N
Sbjct: 59  RWIRRPVTTKIDGRNKTN 76


>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/71 (39%), Positives = 43/71 (60%)
 Frame = +3

Query: 162 MCFSLMPFPRCRLHSLANCWWENLYKFRXXXXXXXXXXYKVLCSNNFEIEGGYSRRWTRR 341
           MCFS++  PRCR+H+LA+ W E+ +             +K+L S+   +EGG SRRWTRR
Sbjct: 1   MCFSILQVPRCRIHTLASFWRESFHSL--GSTCRSSSSFKLLGSHTNGLEGGNSRRWTRR 58

Query: 342 SINSQTGGNKE 374
            I +++ G  +
Sbjct: 59  PITTKSEGRNK 69


>ref|XP_004494552.1| PREDICTED: DNA polymerase III PolC-type-like isoform X1 [Cicer
           arietinum] gi|502113139|ref|XP_004494553.1| PREDICTED:
           DNA polymerase III PolC-type-like isoform X2 [Cicer
           arietinum] gi|502113142|ref|XP_004494554.1| PREDICTED:
           DNA polymerase III PolC-type-like isoform X3 [Cicer
           arietinum]
          Length = 332

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
 Frame = +3

Query: 147 MKTIAMCFSLMPFPRCRLHSLANCWWENLYKFRXXXXXXXXXXYKVLCSNNFEIEGGYSR 326
           MKT +M FS +  PRCR+HSLAN W E    F            + L S  + ++GG+ +
Sbjct: 1   MKTGSMIFSFLQVPRCRIHSLANNWGETFRNFN--NTCEKNFSIRPLGSRIYGLQGGHRK 58

Query: 327 RWTRRSINSQT---GGNK 371
           +WTRR I + T   GG K
Sbjct: 59  KWTRRPITTDTEEGGGTK 76


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