BLASTX nr result

ID: Mentha24_contig00024023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00024023
         (428 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi...    61   1e-07
emb|CBI36047.3| unnamed protein product [Vitis vinifera]               61   2e-07

>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 770

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
 Frame = +1

Query: 31   VVTVVSEEVHTKSDGNDLEVVDGDKEINPNMTLMQSHRGMHCTEYSDASCISSSCTA--- 201
            +V+   E +   + G  +  +  D++   N+   +S + + CT  ++A  +S+S      
Sbjct: 597  LVSTNVENIEMGAIGRGMRWMKADEK--GNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSI 654

Query: 202  -QHVSSSHHTEIDNEGSSLDR-----------------SGEANAQLLLDNGSENGASVIG 327
               VSSS     ++ G S D                  S EA+++LLL+NG  N      
Sbjct: 655  TSEVSSSGDVGFESVGGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQ 714

Query: 328  DGLREKLEPNGALAMVLKSGEGVGSEAVEKNVM 426
            DGL E+LEPN AL +VLKS  GV SE V K+V+
Sbjct: 715  DGLHEELEPNAALGIVLKSRGGVDSEPVPKSVL 747


>emb|CBI36047.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 21/119 (17%)
 Frame = +1

Query: 133 QSHRGMHCTEYSDASCISSSCTA----QHVSSSHHTEIDNEGSSLDR------------- 261
           +S + + CT  ++A  +S+S         VSSS     ++ G S D              
Sbjct: 550 KSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSGDVGFESVGGSSDGNTGSVEGSNILGI 609

Query: 262 ----SGEANAQLLLDNGSENGASVIGDGLREKLEPNGALAMVLKSGEGVGSEAVEKNVM 426
               S EA+++LLL+NG  N      DGL E+LEPN AL +VLKS  GV SE V K+V+
Sbjct: 610 SQGDSCEADSELLLENGCVNAKEGFQDGLHEELEPNAALGIVLKSRGGVDSEPVPKSVL 668


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