BLASTX nr result
ID: Mentha24_contig00023371
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00023371
(514 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus... 177 1e-42
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 174 1e-41
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote... 172 3e-41
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 167 1e-39
gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea] 165 5e-39
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ... 165 5e-39
ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [A... 164 9e-39
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas... 163 2e-38
ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein... 163 2e-38
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop... 163 3e-38
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 162 3e-38
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 162 3e-38
ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854... 161 8e-38
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun... 160 1e-37
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein... 160 2e-37
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein... 159 3e-37
ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like ... 159 3e-37
gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz... 159 5e-37
gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo... 159 5e-37
ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] g... 159 5e-37
>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus guttatus]
Length = 606
Score = 177 bits (449), Expect = 1e-42
Identities = 98/164 (59%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
++PV GLKAGEAGYDPFSRRWTRSRNYYV E + NGGG
Sbjct: 455 MKPVTIGLKAGEAGYDPFSRRWTRSRNYYVGNSGGGVEA-----------EVAVETNGGG 503
Query: 181 AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKG 360
KLVDT APVDQGTES +LHNFELPISL VLQKFGGP+G
Sbjct: 504 GA-ALPGLAATEAALVAAAGAGKLVDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQG 562
Query: 361 AQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
QAG+MARKQ +EA GVKVP+ DGRRH LTL+VSDYKRRRGLL
Sbjct: 563 TQAGFMARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 606
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 657
Score = 174 bits (441), Expect = 1e-41
Identities = 94/164 (57%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PV GLKAGEAGYDPFSRRWTRSRNYYV + GG
Sbjct: 494 LKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDEQKDDAEANAVAAESLAEVETNGTGG 553
Query: 181 AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKG 360
V KL+DT APVDQGT S LHNFELPISL LQKFGGP+G
Sbjct: 554 VVAVRAGLEATAAALEAAAGAGKLIDTMAPVDQGTSSNPLHNFELPISLATLQKFGGPQG 613
Query: 361 AQAGYMARKQMVEANHGVKVP-DDGRRHPLTLTVSDYKRRRGLL 489
AQ G+MARKQ +EA GV+VP DDGRRH LTL+VSDYKRRRGLL
Sbjct: 614 AQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 657
>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus
notabilis]
Length = 658
Score = 172 bits (437), Expect = 3e-41
Identities = 95/164 (57%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PVN GLKAGEAGYDPFSRRWTRSRNYYV G
Sbjct: 495 LKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGANAGNNGASTDAENNGRHG 554
Query: 181 AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKG 360
V KLVDT APVDQGT S MLHNFELPISL+VLQKFGGP+G
Sbjct: 555 IVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHNFELPISLSVLQKFGGPQG 614
Query: 361 AQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
AQAG+MARKQ +EA G +VP+ DGRRH LTL+V DYKRRRGLL
Sbjct: 615 AQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Glycine max]
Length = 656
Score = 167 bits (424), Expect = 1e-39
Identities = 96/165 (58%), Positives = 104/165 (63%), Gaps = 2/165 (1%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
++PVN GLKAGEAGYDPFSRRWTRSRNYY NG G
Sbjct: 495 MKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNSVNGNVAGAG---SNGTG 551
Query: 181 A-VFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPK 357
A V KLVDT APVDQGTES MLHNFELPISL +LQKFGG +
Sbjct: 552 APVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKFGGAQ 611
Query: 358 GAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
GAQAG+MARKQ +EA G +V + DGRRH LTLTVSDYKRRRGLL
Sbjct: 612 GAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656
>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
Length = 643
Score = 165 bits (418), Expect = 5e-39
Identities = 91/167 (54%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
++PVN LKAGE GYDPFSRRWTRSRNYYV T
Sbjct: 466 MKPVNTSLKAGEVGYDPFSRRWTRSRNYYVSNAATGIGEANGSANVASVAATAAALEAAA 525
Query: 181 AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKG 360
KLVDT APVDQGTES +LH+FELPISL LQ+ GGP+G
Sbjct: 526 GA-------------------GKLVDTNAPVDQGTESNLLHDFELPISLAALQRLGGPQG 566
Query: 361 AQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL*FC 498
AQAG MARKQ +EAN+GVKVP+ DGRRH LTLTVSDYKRRR L C
Sbjct: 567 AQAGLMARKQWIEANYGVKVPENDGRRHALTLTVSDYKRRRDPLTMC 613
>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|590624750|ref|XP_007025692.1| PAF1 complex component
isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 165 bits (418), Expect = 5e-39
Identities = 92/167 (55%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PVN GLKAGEAGYDPFSRRWTRSRNYYV ++ +G G
Sbjct: 499 LKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVANGDRIG-----VIASGNG 553
Query: 181 ---AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGG 351
KLVDT APVD+GTES MLH+FE+PISL LQ+FGG
Sbjct: 554 NDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHDFEIPISLNALQRFGG 613
Query: 352 PKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
P+GA AG+MARKQ +EA G +VP+ DGRRH LTLTVSDYKRRRGLL
Sbjct: 614 PQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660
>ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [Amborella trichopoda]
gi|548857220|gb|ERN15034.1| hypothetical protein
AMTR_s00032p00242160 [Amborella trichopoda]
Length = 624
Score = 164 bits (416), Expect = 9e-39
Identities = 90/164 (54%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PVN LKAGEAGYDPFSRRWTRSRNYYV + GG
Sbjct: 483 LKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP----------------------EGGGE 520
Query: 181 AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKG 360
V KLVDT+APVD+GTES+ LH+FELPISL LQ+FGGP+G
Sbjct: 521 VVKEEAETAATKAALEAAADAGKLVDTKAPVDEGTESHSLHDFELPISLAGLQRFGGPQG 580
Query: 361 AQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
AQ +MARKQ +EA GV+VP+ DGRRH LTL+VSDYKRRRGL+
Sbjct: 581 AQLAFMARKQRIEATIGVRVPENDGRRHSLTLSVSDYKRRRGLV 624
>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
gi|561032714|gb|ESW31293.1| hypothetical protein
PHAVU_002G226300g [Phaseolus vulgaris]
Length = 654
Score = 163 bits (413), Expect = 2e-38
Identities = 91/164 (55%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PVN GLKAGEAGYDPFSRRWTRSRNYY + G
Sbjct: 496 LKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGNNSVNGIVAGPGTNST-----GA 550
Query: 181 AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKG 360
V KLVDT APVDQGTES MLHNFELPISL +LQK+GG +G
Sbjct: 551 PVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKYGGAQG 610
Query: 361 AQAGYMARKQMVEANHGVKV-PDDGRRHPLTLTVSDYKRRRGLL 489
AQAG+MARKQ +E+ G +V +DGRRH LTL+VSDYKRRRGLL
Sbjct: 611 AQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654
>ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 679
Score = 163 bits (413), Expect = 2e-38
Identities = 95/173 (54%), Positives = 101/173 (58%), Gaps = 10/173 (5%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNG-- 174
L+P+N LKAGEAGYDPFSRRWTRSRNYYV ET NG
Sbjct: 515 LKPINTNLKAGEAGYDPFSRRWTRSRNYYVGKPGGGDEAAED--------ETAEAANGFL 566
Query: 175 -------GGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTV 333
V KLVDTRAPVDQ TE+Y LHNFELPISL
Sbjct: 567 GASNDKAEAKVMGEFGVKATAAALEAAAGAGKLVDTRAPVDQATEAYTLHNFELPISLAG 626
Query: 334 LQKFGGPKGAQAGYMARKQMVEANHGVKVP-DDGRRHPLTLTVSDYKRRRGLL 489
LQKFGGP GA A Y ARKQ +EA G KVP DDG+RH LTL+VSDYKRRRGLL
Sbjct: 627 LQKFGGPHGAPAAYSARKQKIEATLGYKVPEDDGKRHALTLSVSDYKRRRGLL 679
>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
gi|222848649|gb|EEE86196.1| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 662
Score = 163 bits (412), Expect = 3e-38
Identities = 91/165 (55%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
++PVN GLKAGEAGYDPFSRRWTRSRNYYV + N
Sbjct: 498 MKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVATKISEANETVAVAASNQVV 557
Query: 181 A-VFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPK 357
A V KLVDT APVDQGTES +H+FEL ISL LQ+FGGP+
Sbjct: 558 AGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTMHSFELEISLIALQEFGGPQ 617
Query: 358 GAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
GAQAG+MARKQ +EA G +VP+ DGRRH LTLTV DYKRRRGLL
Sbjct: 618 GAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 662
>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 162 bits (411), Expect = 3e-38
Identities = 94/165 (56%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PVN GLKAGEAGYDPFSRRWTRSRNYY N G
Sbjct: 495 LKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNIVNGNVAGAG---SNATG 551
Query: 181 A-VFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPK 357
A V KLVDT APVDQGTES MLHNFELPISL +LQK+GG
Sbjct: 552 APVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKYGGAP 611
Query: 358 GAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
GAQAG+MARKQ +E+ G +V + DGRRH LTLTVSDYKRRRGLL
Sbjct: 612 GAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 162 bits (411), Expect = 3e-38
Identities = 91/164 (55%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PVN LKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 497 LKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATNNEASGTVAVANKTESAA 556
Query: 181 AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKG 360
V KLVDT APVDQGTES LHNFELPISLT LQKFGG +G
Sbjct: 557 GVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNFELPISLTALQKFGGAQG 616
Query: 361 AQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
AQAG+MARKQ +EA G +V + D +RH LTLTVSDYKRRRGLL
Sbjct: 617 AQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGLL 660
>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
Length = 493
Score = 161 bits (408), Expect = 8e-38
Identities = 91/161 (56%), Positives = 97/161 (60%), Gaps = 1/161 (0%)
Frame = +1
Query: 10 VNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGGAVF 189
VN LKAGEAGYDPFSRRWTRSRNYYV NG G
Sbjct: 333 VNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGGDEAAAVANGEAPAAFVGAGSNGTGGKG 392
Query: 190 XXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKGAQA 369
KLVDT APVDQGTES LH+FELPISL LQKFGGP+GA A
Sbjct: 393 AEVGVAATAAALEAAADAGKLVDTSAPVDQGTESNTLHDFELPISLAGLQKFGGPQGALA 452
Query: 370 GYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
G+MARKQ +EA G +VP+ DGRRH LTLTV DYKRRRGLL
Sbjct: 453 GFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 493
>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
gi|462413781|gb|EMJ18830.1| hypothetical protein
PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 160 bits (406), Expect = 1e-37
Identities = 90/166 (54%), Positives = 103/166 (62%), Gaps = 3/166 (1%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PV GLKAGEAGYDPFSRRWTRSRNYYV +++ G
Sbjct: 483 LKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALAD--IESNGT 540
Query: 181 AVFXXXXXXXXXXXXXXXXXXX--KLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGP 354
AV KL+DT APVD GTES ++HNFELPISL LQKFGGP
Sbjct: 541 AVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLATLQKFGGP 600
Query: 355 KGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
+GAQ G++ARKQ +EA G +VP+ DGRRH LTLTVSDYKRR GLL
Sbjct: 601 QGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646
>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Cicer arietinum]
Length = 653
Score = 160 bits (404), Expect = 2e-37
Identities = 92/165 (55%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PVN GLKAGEAGYDPFSRRWTRSRNYY NG G
Sbjct: 492 LKPVNKGLKAGEAGYDPFSRRWTRSRNYYNAKQAEEAAAGNNSSGGAVGDRG---SNGVG 548
Query: 181 A-VFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPK 357
A V KLVDTRAPVDQGTES LHNFELPISLT+LQKFGG +
Sbjct: 549 ATVAGEAGVVATAEALEAAADAGKLVDTRAPVDQGTESNFLHNFELPISLTILQKFGGAQ 608
Query: 358 GAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
G AG++A+KQ +E G +VP+ DG+ H LTLTVSDYKRRRGLL
Sbjct: 609 GVHAGFIAKKQRIEEIVGFRVPENDGKSHMLTLTVSDYKRRRGLL 653
>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Cicer arietinum]
Length = 658
Score = 159 bits (403), Expect = 3e-37
Identities = 93/168 (55%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNG-- 174
LRPVN GLKAGEAGYDPFSRRWTRSRNYYV L+ G
Sbjct: 497 LRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKPGEKAAARKNTT------NVLVADAGSN 550
Query: 175 --GGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFG 348
G V KLVDT APVDQGTES LHNFELPISL +L K+G
Sbjct: 551 ITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESNFLHNFELPISLALLHKYG 610
Query: 349 GPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
G +GAQAG+MARKQ +EA G +V + DGRRH LTL+V DYKRRRGLL
Sbjct: 611 GAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYKRRRGLL 658
>ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like protein [Medicago
truncatula] gi|355500443|gb|AES81646.1| RNA
polymerase-associated protein RTF1-like protein
[Medicago truncatula]
Length = 624
Score = 159 bits (403), Expect = 3e-37
Identities = 90/164 (54%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGG 180
L+PVN LKAGEAGYDPFSRRWTRSRNYY GG
Sbjct: 469 LKPVNKALKAGEAGYDPFSRRWTRSRNYYNSKPAEEATAGNNTSGGAV--------GDGG 520
Query: 181 AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKG 360
+ KLVDTRAPVD+GTES +LH+FELPISL +LQKFGG KG
Sbjct: 521 SNGIGAGMAATTEALEAAAGAGKLVDTRAPVDEGTESNVLHDFELPISLAMLQKFGGAKG 580
Query: 361 AQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
QAG+MA+KQ +E G +VP+ DGRRH LTLTVSDYKRRRGLL
Sbjct: 581 VQAGFMAKKQRIEEVVGFRVPENDGRRHQLTLTVSDYKRRRGLL 624
>gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group] gi|77556035|gb|ABA98831.1| Plus-3 domain
containing protein, expressed [Oryza sativa Japonica
Group] gi|215697432|dbj|BAG91426.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 522
Score = 159 bits (401), Expect = 5e-37
Identities = 92/166 (55%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNG-- 174
++PVN LK GEAGYDPFSRRWTRSRNYY KNG
Sbjct: 364 MKPVNTSLKVGEAGYDPFSRRWTRSRNYYAAKPEGESAEVPNGNDGSAVAGDEDTKNGPR 423
Query: 175 GGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGP 354
GG+ KLVDT APVD GTES +LHNFEL ISL L++FGGP
Sbjct: 424 GGSA-------ATAAALVAAADAGKLVDTNAPVDLGTESNLLHNFELGISLAGLEEFGGP 476
Query: 355 KGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
KG GYMARKQ +EA G KVPD DGRRH LTLTVSDYKRRRGLL
Sbjct: 477 KGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 522
>gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
Length = 653
Score = 159 bits (401), Expect = 5e-37
Identities = 92/166 (55%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNG-- 174
++PVN LK GEAGYDPFSRRWTRSRNYY KNG
Sbjct: 495 MKPVNTSLKVGEAGYDPFSRRWTRSRNYYAAKPEGESAEVPNGNDGSAVAGDEDTKNGPR 554
Query: 175 GGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGP 354
GG+ KLVDT APVD GTES +LHNFEL ISL L++FGGP
Sbjct: 555 GGSA-------ATAAALVAAADAGKLVDTNAPVDLGTESNLLHNFELGISLAGLEEFGGP 607
Query: 355 KGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
KG GYMARKQ +EA G KVPD DGRRH LTLTVSDYKRRRGLL
Sbjct: 608 KGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 653
>ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
gi|113649443|dbj|BAF29955.1| Os12g0535900, partial
[Oryza sativa Japonica Group]
Length = 599
Score = 159 bits (401), Expect = 5e-37
Identities = 92/166 (55%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Frame = +1
Query: 1 LRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNG-- 174
++PVN LK GEAGYDPFSRRWTRSRNYY KNG
Sbjct: 441 MKPVNTSLKVGEAGYDPFSRRWTRSRNYYAAKPEGESAEVPNGNDGSAVAGDEDTKNGPR 500
Query: 175 GGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGP 354
GG+ KLVDT APVD GTES +LHNFEL ISL L++FGGP
Sbjct: 501 GGSA-------ATAAALVAAADAGKLVDTNAPVDLGTESNLLHNFELGISLAGLEEFGGP 553
Query: 355 KGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 489
KG GYMARKQ +EA G KVPD DGRRH LTLTVSDYKRRRGLL
Sbjct: 554 KGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 599