BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00023311
         (332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...   104   1e-20
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...    93   3e-17
gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]    87   2e-15
gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]    86   7e-15
ref|NP_395469.1| putative reverse transcriptase [Blueberry red r...    84   2e-14
gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]    84   3e-14
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]    84   3e-14
ref|YP_001931967.1| replicase [Eupatorium vein clearing virus] g...    73   5e-11
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] g...    71   2e-10
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]     69   5e-10
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]     69   5e-10
ref|NP_042513.1| reverse transcriptase [Peanut chlorotic streak ...    69   7e-10
ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia fl...    67   2e-09
ref|YP_001931961.1| replicase [Lamium leaf distortion virus] gi|...    67   2e-09
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote...    67   3e-09
dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]       66   6e-09
dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]       66   6e-09
dbj|BAO53631.1| reverse transcriptase [Cauliflower mosaic virus]       66   6e-09
dbj|BAO53624.1| reverse transcriptase [Cauliflower mosaic virus]       66   6e-09
dbj|BAO53617.1| reverse transcriptase [Cauliflower mosaic virus]       66   6e-09

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
           gi|18266821|sp|P15629.2|POL_SOCMV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|11322953|emb|CAC16945.1| putative
           reverse transcriptase [Soybean chlorotic mottle virus]
          Length = 692

 Score =  104 bits (259), Expect = 1e-20
 Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
 Frame = +1

Query: 10  DSKLSSQISKYQT--VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFEL 183
           D+ ++S+I K +   +LCKY SGTF   E  YPI E E LA ++V+EKW I+LL  RF L
Sbjct: 571 DTHVASKIKKLENELLLCKYVSGTFTDTETRYPIAELEVLAGVKVLEKWRIDLLQTRFLL 630

Query: 184 RIDSSYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
           R DS Y + F R         GRLIRW  R   + P ++L+KSENNPFA
Sbjct: 631 RTDSKYFAGFCRYNIKTDYRNGRLIRWQLRLQAYQPYVELIKSENNPFA 679


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|32305282|gb|AAP78924.1| putative
           multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 57/93 (61%)
 Frame = +1

Query: 52  LCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQI 231
           LCKY SG F  AE  Y +HEKETLAAL+ + KW  ELL + F LR DSSYV+ F R+   
Sbjct: 541 LCKYTSGIFSSAEQKYTVHEKETLAALKTMRKWKAELLPKEFTLRTDSSYVTGFARHNLK 600

Query: 232 QKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
              N+GRL+RW   F  +   ++ +K E N  A
Sbjct: 601 ANYNQGRLVRWQLEFLQYPARVEYIKGEKNSLA 633


>gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 680

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 49/112 (43%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
 Frame = +1

Query: 7   TDSKLSSQISKYQT-------VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELL 165
           T   LSSQ   + T       +L KY SGTF   E  YPIHE ETLA L+   KW ++LL
Sbjct: 556 TAQALSSQYQFFGTKDFVQKELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLL 615

Query: 166 TQRFELRIDSSYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENN 321
           T+ F L+ DS YV+ F+R K     N+GRLIRW    + FN     +K   N
Sbjct: 616 TKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQFNYRTFYIKGSEN 667


>gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
 Frame = +1

Query: 7   TDSKLSSQISKYQT-------VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELL 165
           T   LSSQ   + T       +L KY SGTF   E  YPIHE ETLA L+   KW ++LL
Sbjct: 533 TAQALSSQYQFFGTKDFVQKELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLL 592

Query: 166 TQRFELRIDSSYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENN 321
           ++ F L+ DS YV+ F+R K     N+GRLIRW    + FN     +K   N
Sbjct: 593 SKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQFNYRTFYIKGSEN 644


>ref|NP_395469.1| putative reverse transcriptase [Blueberry red ringspot virus]
           gi|16033536|gb|AAL13274.1|AF404509_4 putative reverse
           transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 47/112 (41%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
 Frame = +1

Query: 7   TDSKLSSQISKYQT-------VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELL 165
           T   LSSQ   + T       +L KY SGTF   E  YPIHE ETLA L+   KW ++LL
Sbjct: 533 TAQALSSQYQFFGTKDFVQKELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLL 592

Query: 166 TQRFELRIDSSYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENN 321
           ++ F L+ DS YV+ F+R K     N+GR IRW    + FN     +K   N
Sbjct: 593 SKPFILKTDSKYVTGFLRYKIKANYNQGRFIRWQLELSQFNYRTFYIKGSEN 644


>gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
 Frame = +1

Query: 7   TDSKLSSQISKYQT-------VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELL 165
           T   LSSQ   + T       +L KY SGTF   E  YPIHE ETLA L+   KW ++LL
Sbjct: 533 TAQALSSQYQFFGTKDFVQKELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLL 592

Query: 166 TQRFELRIDSSYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENN 321
           ++ F L+ DS YV+ F+R K     N+GRLIRW    + F+     +K   N
Sbjct: 593 SKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQFSYRTFYIKGSEN 644


>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
 Frame = +1

Query: 7   TDSKLSSQISKYQT-------VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELL 165
           T   LSSQ   + T       +L KY SGTF   E  YPIHE ETLA L+   KW ++LL
Sbjct: 543 TAQALSSQYQFFGTKDFVQKELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLL 602

Query: 166 TQRFELRIDSSYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENN 321
           ++ F L+ DS YV+ F+R K     N+GRLIRW    + F+     +K   N
Sbjct: 603 SKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQFSYRTFYIKGSEN 654


>ref|YP_001931967.1| replicase [Eupatorium vein clearing virus]
           gi|172041764|gb|ACB69773.1| replicase [Eupatorium vein
           clearing virus]
          Length = 674

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 36/90 (40%), Positives = 54/90 (60%)
 Frame = +1

Query: 52  LCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQI 231
           +C Y SGTFKQAELNY  +EKE LA +R I+ +P+ L    F +R D+  +  F+ +K  
Sbjct: 572 ICCYASGTFKQAELNYHSNEKEILAVIRSIQSFPVYLTPVEFIVRTDNKTMEHFLTSKFE 631

Query: 232 QKSNKGRLIRWYQRFNLFNPIIKLVKSENN 321
             +  GRL+RW   F  +N  ++ +K  +N
Sbjct: 632 LGTKSGRLVRWQMWFKHYNFKVEHIKGTSN 661


>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
           gi|21427196|gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
          Length = 674

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
 Frame = +1

Query: 19  LSSQISKYQTVLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDS- 195
           L +Q ++ + ++C+Y SGTFK AELNY  +EKE LA  +VI K+ I L    F +R D+ 
Sbjct: 554 LKAQTTEGEELICRYSSGTFKPAELNYHSNEKELLAVKQVITKFSIYLTPVCFTVRTDNV 613

Query: 196 SYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
           + +  F+  K    S +GRLIRW   F+ +   +  +K E N  A
Sbjct: 614 NLLKGFMNKKITGDSKQGRLIRWQMWFSHYTFKVDHLKGEQNVLA 658


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
 Frame = +1

Query: 19  LSSQISKYQTVLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDS- 195
           L +Q ++   ++C+Y SGTFK AELNY  +EKE LA  +VI K+ I L    F +R D+ 
Sbjct: 556 LKAQTTEGNELICRYSSGTFKPAELNYHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNV 615

Query: 196 SYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
           + +  F+  K    S +GRLIRW    + +   +  +K E N  A
Sbjct: 616 NLLKRFMNTKITGDSKQGRLIRWQMWLSHYTFNVNHLKGEKNVLA 660


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
 Frame = +1

Query: 19  LSSQISKYQTVLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDS- 195
           L +Q ++   ++C+Y SGTFK AELNY  +EKE LA  +VI K+ I L    F +R D+ 
Sbjct: 556 LKAQTTEGNELICRYSSGTFKPAELNYHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNV 615

Query: 196 SYVSTFIRNKQIQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
           + +  F+  K    S +GRLIRW    + +   +  +K E N  A
Sbjct: 616 NLLKRFMNTKITGDSKQGRLIRWQMWLSHYTFNVNHLKGEKNVLA 660


>ref|NP_042513.1| reverse transcriptase [Peanut chlorotic streak virus]
           gi|555885|gb|AAA50240.1| reverse transcriptase [Peanut
           chlorotic streak virus]
          Length = 694

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/94 (38%), Positives = 55/94 (58%)
 Frame = +1

Query: 49  VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQ 228
           ++ K+ SGTFK AE NY +HEKE LA +  ++K+ I+L   +F  + D+S+V  F+ NK 
Sbjct: 589 MITKWSSGTFKPAEENYTVHEKELLAFVNALKKFQIDLRPVKFIFQTDNSWVQGFLVNKL 648

Query: 229 IQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
            +  N+GRL RW      F+ I   +  + N  A
Sbjct: 649 KETYNRGRLARWSMFIQQFDFISLHIAGKENYLA 682


>ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
           gi|219815610|gb|ACL36982.1| putative enzymatic
           polyprotein [Rudbeckia flower distortion virus]
          Length = 701

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +1

Query: 52  LCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQI 231
           LC+Y SG+FK AE+NY  +EKE LA  R I K+   L +  F +R D+ Y + F+R    
Sbjct: 597 LCRYTSGSFKPAEINYHSNEKEVLAVKRTITKFKGYLASSEFLVRTDNKYFTYFLRTSIK 656

Query: 232 QKSNKGRLIRWYQRFN 279
               +GRLIRW Q F+
Sbjct: 657 DDYKQGRLIRWQQWFS 672


>ref|YP_001931961.1| replicase [Lamium leaf distortion virus]
           gi|172041757|gb|ACB69767.1| replicase [Lamium leaf
           distortion virus]
          Length = 696

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/93 (37%), Positives = 54/93 (58%)
 Frame = +1

Query: 52  LCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQI 231
           +C+Y SG+FK+AELNY  +EKE LA +RVI K+ I L    F +R D+   + F+     
Sbjct: 589 ICRYTSGSFKKAELNYHSNEKEILAVIRVIAKFTIYLTPLEFLIRTDNKNFTFFMNTNVK 648

Query: 232 QKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
               +GRL+RW Q  + ++  ++ +    N FA
Sbjct: 649 GDYKQGRLVRWQQWLSRYSFKVEHITGVKNIFA 681


>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Carnation etched ring virus]
           gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58863|emb|CAA28360.1|
           unnamed protein product [Carnation etched ring virus]
           gi|225356|prf||1301227E ORF 5
          Length = 659

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/93 (36%), Positives = 53/93 (56%)
 Frame = +1

Query: 52  LCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQI 231
           +C+Y SG+FK AE NY  +EKE LA +RVI+K+ I L   RF +R D+   + F+     
Sbjct: 555 ICRYASGSFKAAERNYHSNEKELLAVIRVIKKFSIYLTPSRFLIRTDNKNFTHFVNINLK 614

Query: 232 QKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
               +GRL+RW    + ++  ++ +    N FA
Sbjct: 615 GDRKQGRLVRWQMWLSQYDFDVEHIAGTKNVFA 647


>dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 55/94 (58%)
 Frame = +1

Query: 49  VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQ 228
           ++C+Y SG+FK AE NY  ++KETLA +  I+K+ I L    F +R D+++  +F+    
Sbjct: 569 LICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNY 628

Query: 229 IQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
              S  GR IRW    + ++  ++ +K  +N FA
Sbjct: 629 KGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFA 662


>dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 55/94 (58%)
 Frame = +1

Query: 49  VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQ 228
           ++C+Y SG+FK AE NY  ++KETLA +  I+K+ I L    F +R D+++  +F+    
Sbjct: 569 LICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNY 628

Query: 229 IQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
              S  GR IRW    + ++  ++ +K  +N FA
Sbjct: 629 KGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFA 662


>dbj|BAO53631.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 55/94 (58%)
 Frame = +1

Query: 49  VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQ 228
           ++C+Y SG+FK AE NY  ++KETLA +  I+K+ I L    F +R D+++  +F+    
Sbjct: 569 LICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNY 628

Query: 229 IQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
              S  GR IRW    + ++  ++ +K  +N FA
Sbjct: 629 KGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFA 662


>dbj|BAO53624.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 55/94 (58%)
 Frame = +1

Query: 49  VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQ 228
           ++C+Y SG+FK AE NY  ++KETLA +  I+K+ I L    F +R D+++  +F+    
Sbjct: 569 LICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNY 628

Query: 229 IQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
              S  GR IRW    + ++  ++ +K  +N FA
Sbjct: 629 KGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFA 662


>dbj|BAO53617.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 55/94 (58%)
 Frame = +1

Query: 49  VLCKYCSGTFKQAELNYPIHEKETLAALRVIEKWPIELLTQRFELRIDSSYVSTFIRNKQ 228
           ++C+Y SG+FK AE NY  ++KETLA +  I+K+ I L    F +R D+++  +F+    
Sbjct: 569 LICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNY 628

Query: 229 IQKSNKGRLIRWYQRFNLFNPIIKLVKSENNPFA 330
              S  GR IRW    + ++  ++ +K  +N FA
Sbjct: 629 KGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFA 662