BLASTX nr result
ID: Mentha24_contig00021202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00021202
(1206 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus... 233 2e-58
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 209 1e-51
gb|EPS68250.1| hypothetical protein M569_06521 [Genlisea aurea] 199 2e-48
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 193 1e-46
ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobro... 186 2e-44
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro... 186 2e-44
ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citr... 181 4e-43
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 181 4e-43
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 180 1e-42
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 180 1e-42
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35] 179 3e-42
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 178 4e-42
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] 178 4e-42
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 177 6e-42
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana] 177 6e-42
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 177 6e-42
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea] 177 1e-41
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g... 177 1e-41
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 176 2e-41
ref|XP_007020667.1| DNA topoisomerase I alpha isoform 4, partial... 174 7e-41
>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
Length = 883
Score = 233 bits (593), Expect = 2e-58
Identities = 163/372 (43%), Positives = 209/372 (56%), Gaps = 31/372 (8%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDED-APMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNA 359
M VEA + + M+D+DD+D AP+VFKR PE K S QKH+ Q+GR + +
Sbjct: 1 MTVEAREDKNMMEDMDDDDDAPLVFKRSGSSSKPKQSEPENKLS-SQKHNAQVGRQSSDV 59
Query: 360 RXXXXXXXXA-----------FLPGHRLIDLL**AQNYLIPLPGDWQLN---LRMPD--S 491
R A P R + + P + + ++ PD S
Sbjct: 60 RPQNGTNANAQKGKSVTSSSSMKPPVR--------PSLVSPKSSNSSVKASPIKSPDVNS 111
Query: 492 IPSTSMTGELNSVKRQITGENALNKSTSGPNEDSEDSEDDKPLSARF---SKVNSGNAYK 662
PSTS+ GE SVK I EN SEDSEDDKPLSAR S N+ N
Sbjct: 112 KPSTSVVGESKSVKSTIKEEN------------SEDSEDDKPLSARQVAGSSKNNPNQTN 159
Query: 663 GANTLNSGQNSKIPKSEDSDDKVPLSSKFRVKSSTSA---------EKKPLLA-ECGQNG 812
N N G+ S +PK EDSDD++PLS+KF+ KS+ A EKKPL+A + +NG
Sbjct: 160 KPNAPNLGKKSNVPKPEDSDDEIPLSAKFQGKSNAGASTSRSSHSEEKKPLVARKPDKNG 219
Query: 813 SISGERKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHV 992
S S ERKPSTVL+KR D V S+LK+PKLS+ S K+K++S K E+K EDDED V
Sbjct: 220 SASTERKPSTVLQKRPADGVASAGQSNLKKPKLSD-SLASKDKKASVKPEVKAEDDEDLV 278
Query: 993 PISQRMKKTVLLEKK-SAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEG 1169
P+SQR KK+ EKK S +K K K NKK ++V K++ YS+SSK+PPSSG+G
Sbjct: 279 PLSQRTKKSTTPEKKPSPALKTNNKTNSKTNSKTNKKSKQVSKDNNYSKSSKLPPSSGDG 338
Query: 1170 QKWTTLVHNGVI 1205
QKWTTLVHNGVI
Sbjct: 339 QKWTTLVHNGVI 350
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 209 bits (533), Expect = 1e-51
Identities = 152/369 (41%), Positives = 206/369 (55%), Gaps = 28/369 (7%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAV+AC K+K MD++D++D P+VFKR +TKKS Q++D Q GR +
Sbjct: 1 MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKS-SQRYDGQSGRQVSDVP 59
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDSIPSTSMTGELNSVKRQI 542
A + + ++ + P + P S + + S +
Sbjct: 60 STNGQSSSASKGKTTKLSSM---KSPIASPKASTSFAKASPVANPKVSSSSDDRS--KHS 114
Query: 543 TGENALN-----KSTSGPN-EDSEDSEDDKPLSARF----SKVNSGNAYKGANTLNSGQN 692
+ +N +N K P E DSED+KPLSAR +K +S NA KG +NS
Sbjct: 115 SKQNTINVVKEEKELVNPAAEPYGDSEDEKPLSARLFTGLTKGSSNNANKGL--INSSPA 172
Query: 693 S-KIPK------SEDSDDKVPLSSKFR---------VKSSTSAEKKPLLAECGQNGSISG 824
S +PK S+DSDD++PLSSKFR VKS S + K L++ QNGSI+
Sbjct: 173 SLPVPKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINR 232
Query: 825 ERKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEED-DEDHVPIS 1001
K S + KR + +VK SS+K+PKLS+ ST NK++S KAE K +D D+DHVPIS
Sbjct: 233 GSKSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPIS 292
Query: 1002 QRMKKTVLLEKKSAVVK-KMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKW 1178
QRMKK+ KS+ K K+TK + KK +KK +KV+K SKYS+SSKVPPSSGEG+KW
Sbjct: 293 QRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSKVPPSSGEGKKW 352
Query: 1179 TTLVHNGVI 1205
TLVHNGVI
Sbjct: 353 NTLVHNGVI 361
>gb|EPS68250.1| hypothetical protein M569_06521 [Genlisea aurea]
Length = 614
Score = 199 bits (507), Expect = 2e-48
Identities = 142/356 (39%), Positives = 194/356 (54%), Gaps = 15/356 (4%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDED-APMVFKRXXXXXXXXXXXP-ETKKSLPQKHDQQLGRPALN 356
MAV++CD+ K MD+ D++D AP++FKR E K+ LP K Q + +
Sbjct: 1 MAVDSCDETKSMDNSDEDDGAPIIFKRSANSSAKQNSLKQEAKRPLPPKPSIQNSKAVSS 60
Query: 357 ARXXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDSIPSTSMTGELNSVKR 536
++ N GD +P ++ S+S+T + +S K+
Sbjct: 61 SK----------------------TPNIARVRSGD------LP-TVKSSSVTCKPSSEKQ 91
Query: 537 QITGENALNKSTSGPNEDSEDSEDDKPLSARFSKVNSGNAYKGANTLNSGQNSKI-PKSE 713
QI E +++ P+++S DS DDKP+ S + NA KG N SG K PKSE
Sbjct: 92 QIKREKQIDE----PSKNSGDS-DDKPVVGSSSSFSPVNADKGNNASTSGHTLKTTPKSE 146
Query: 714 DSDDKVPLSSKFR----------VKSSTSAEKKPLLAECGQNGSISGERKPSTVLKKRNV 863
DSDD+ PLS +F S +SAE K L + QNGS ++KPS KKR
Sbjct: 147 DSDDEKPLSQRFGRGKLGAVVSPKNSHSSAENKSSLGKVVQNGSTVSDKKPSIASKKRPG 206
Query: 864 DDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEE--DDEDHVPISQRMKKTVLLEKK 1037
DD+K D S +K+PK S T + S+ K ++KEE DD+DHVPISQR+KKT EKK
Sbjct: 207 DDLKS-DESRIKKPKHSGTVEI-----SAAKPQLKEEEEDDDDHVPISQRIKKTASSEKK 260
Query: 1038 SAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
++K TK A + NKK K++K S+YS+SSKVPP SGEGQKWTTLVH+GVI
Sbjct: 261 KTPIQKSTKSPSASLRNVNKKSTKIVKKSEYSKSSKVPPGSGEGQKWTTLVHSGVI 316
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 193 bits (491), Expect = 1e-46
Identities = 144/387 (37%), Positives = 190/387 (49%), Gaps = 46/387 (11%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC DD+D++D P+VFKR ET+K QK D Q R ++R
Sbjct: 1 MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60
Query: 363 XXXXXXXXA----FLPGHRLIDLL**AQNYLIPL------PGDWQLNLRMP--------- 485
+P + PL P + L P
Sbjct: 61 PANGESSSGQKGRMVPPSK-------PSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKK 113
Query: 486 ---DSIPSTSMTGELNSVK----RQITGENALNKSTSGPNE-------DSEDSEDDKPLS 623
S+P+ S S K Q + + S P DSEDS+D KPLS
Sbjct: 114 SPVSSLPANSKPSTSGSFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLS 173
Query: 624 ARFSKVNSGNAYKGANTLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAE 776
R S +S KG S + SK P++EDSDD+ PLSS+F +KS S +
Sbjct: 174 LRHSASSS----KGNTNQVSKEGSK-PENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDD 228
Query: 777 KKPLLAECGQNGSISGERKP---STVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKES 947
KPL + NGS + +P S + KR D+K + S+K+PKLS + K++
Sbjct: 229 DKPLAKKLQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQA 288
Query: 948 STKAEMK-EEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNS 1124
S K E K E+DD+DH+PISQR+KK+ E KS+ +KK TK + KK NKK +KV+KNS
Sbjct: 289 SVKPEPKAEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNS 348
Query: 1125 KYSESSKVPPSSGEGQKWTTLVHNGVI 1205
KYS+SSKVPPSSGEG+KW L HNGVI
Sbjct: 349 KYSKSSKVPPSSGEGKKWNKLEHNGVI 375
>ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
gi|590606159|ref|XP_007020668.1| DNA topoisomerase I
alpha isoform 3 [Theobroma cacao]
gi|508720294|gb|EOY12191.1| DNA topoisomerase I alpha
isoform 3 [Theobroma cacao] gi|508720296|gb|EOY12193.1|
DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
Length = 836
Score = 186 bits (471), Expect = 2e-44
Identities = 142/376 (37%), Positives = 195/376 (51%), Gaps = 35/376 (9%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXX-PETKKSLPQKHDQQLGRPALNA 359
MAVEA K D DD+D P+VFKR E KK+ Q+ D Q GR +
Sbjct: 1 MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60
Query: 360 RXXXXXXXXAFLPGHRLIDLL**--AQNYLIPLPGDWQLNLRMPDSIPSTSMTGE--LNS 527
R A P ++ I ++ ++ +P P + LN
Sbjct: 61 RSPNGQSSNA--PKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLND 118
Query: 528 VKRQITGENALN---------KSTSGPNEDSEDSEDDKPLSARFSKV-NSGNAYKGANTL 677
+Q +N K T+ PN D +D +D PLSAR + N GN KGA+T
Sbjct: 119 QSKQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGISNQGN--KGASTS 176
Query: 678 NSGQNSK-IPKSE------DSDDKVPLSSKFRVKSSTSA---------EKKPLLAECGQN 809
Q+ + +PK+E D DD+ PLS++F VKS+T EKKPL ++ QN
Sbjct: 177 APAQSRRLVPKTEVKVSAEDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQQN 236
Query: 810 GSI--SGERKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDE 983
GSI ++ ST+ KR +D D SS K+PK S+ T K K+ + KAE +EDD
Sbjct: 237 GSIMKGKQQNSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADEDD- 295
Query: 984 DHVPISQRMKKTVLLEKK-SAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSS 1160
DH+PI+QRMKK+ K S++ +K TK + KK NKK +K +K+SKY +S+KVPPSS
Sbjct: 296 DHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSS 355
Query: 1161 GEGQ-KWTTLVHNGVI 1205
G+GQ KW+TLVHNGVI
Sbjct: 356 GDGQKKWSTLVHNGVI 371
>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
alpha isoform 1 [Theobroma cacao]
gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
Length = 904
Score = 186 bits (471), Expect = 2e-44
Identities = 142/376 (37%), Positives = 195/376 (51%), Gaps = 35/376 (9%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXX-PETKKSLPQKHDQQLGRPALNA 359
MAVEA K D DD+D P+VFKR E KK+ Q+ D Q GR +
Sbjct: 1 MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60
Query: 360 RXXXXXXXXAFLPGHRLIDLL**--AQNYLIPLPGDWQLNLRMPDSIPSTSMTGE--LNS 527
R A P ++ I ++ ++ +P P + LN
Sbjct: 61 RSPNGQSSNA--PKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLND 118
Query: 528 VKRQITGENALN---------KSTSGPNEDSEDSEDDKPLSARFSKV-NSGNAYKGANTL 677
+Q +N K T+ PN D +D +D PLSAR + N GN KGA+T
Sbjct: 119 QSKQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGISNQGN--KGASTS 176
Query: 678 NSGQNSK-IPKSE------DSDDKVPLSSKFRVKSSTSA---------EKKPLLAECGQN 809
Q+ + +PK+E D DD+ PLS++F VKS+T EKKPL ++ QN
Sbjct: 177 APAQSRRLVPKTEVKVSAEDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQQN 236
Query: 810 GSI--SGERKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDE 983
GSI ++ ST+ KR +D D SS K+PK S+ T K K+ + KAE +EDD
Sbjct: 237 GSIMKGKQQNSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADEDD- 295
Query: 984 DHVPISQRMKKTVLLEKK-SAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSS 1160
DH+PI+QRMKK+ K S++ +K TK + KK NKK +K +K+SKY +S+KVPPSS
Sbjct: 296 DHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSS 355
Query: 1161 GEGQ-KWTTLVHNGVI 1205
G+GQ KW+TLVHNGVI
Sbjct: 356 GDGQKKWSTLVHNGVI 371
>ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|557555706|gb|ESR65720.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 824
Score = 181 bits (460), Expect = 4e-43
Identities = 142/370 (38%), Positives = 184/370 (49%), Gaps = 29/370 (7%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDD-EDAPMVFKRXXXXXXXXXXXPETKK---SLPQKHDQQLGRPA 350
MAVEA K + D DD ED P VFKR PE K+ S + +
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKRPSSSTANGQNSNAPKDK 60
Query: 351 LNARXXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDSIP--STSMTGELN 524
+ P + A P+ + +R P P ++ + L+
Sbjct: 61 TTVSSSKVLPVKSPPPSQKATTSSAKASPLKSPMRSPVKSPVRSPVKSPVANSKESSPLD 120
Query: 525 SVKRQITGENALN-------KSTSGPNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+Q+ NAL K +G D DSEDDKPLSAR VN G A+
Sbjct: 121 DRLKQLPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGNTKNVNQGIGASKAD 180
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFR--------VKSSTSAEKKPLLAECGQNGSISGE 827
S N K EDSDD+VPLSS+F K S EKKPL ++ QNGS S E
Sbjct: 181 AAISEVNVKTDP-EDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRE 239
Query: 828 --RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVPIS 1001
+K S+V KR + ASS K+PK+S+TS K K+ + K E K+ DD+DH+PIS
Sbjct: 240 TQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVE-KKADDDDHIPIS 298
Query: 1002 QRMKKTVLLEKKSAV-VKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQ-K 1175
QRMK + KKS K TK + +KK NKK +KV+KNS+YS+S+K+ P SG+GQ K
Sbjct: 299 QRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKK 358
Query: 1176 WTTLVHNGVI 1205
WTTLVHNGVI
Sbjct: 359 WTTLVHNGVI 368
>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|567920950|ref|XP_006452481.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555705|gb|ESR65719.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555707|gb|ESR65721.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 902
Score = 181 bits (460), Expect = 4e-43
Identities = 142/370 (38%), Positives = 184/370 (49%), Gaps = 29/370 (7%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDD-EDAPMVFKRXXXXXXXXXXXPETKK---SLPQKHDQQLGRPA 350
MAVEA K + D DD ED P VFKR PE K+ S + +
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKRPSSSTANGQNSNAPKDK 60
Query: 351 LNARXXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDSIP--STSMTGELN 524
+ P + A P+ + +R P P ++ + L+
Sbjct: 61 TTVSSSKVLPVKSPPPSQKATTSSAKASPLKSPMRSPVKSPVRSPVKSPVANSKESSPLD 120
Query: 525 SVKRQITGENALN-------KSTSGPNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+Q+ NAL K +G D DSEDDKPLSAR VN G A+
Sbjct: 121 DRLKQLPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGNTKNVNQGIGASKAD 180
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFR--------VKSSTSAEKKPLLAECGQNGSISGE 827
S N K EDSDD+VPLSS+F K S EKKPL ++ QNGS S E
Sbjct: 181 AAISEVNVKTDP-EDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRE 239
Query: 828 --RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVPIS 1001
+K S+V KR + ASS K+PK+S+TS K K+ + K E K+ DD+DH+PIS
Sbjct: 240 TQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVE-KKADDDDHIPIS 298
Query: 1002 QRMKKTVLLEKKSAV-VKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQ-K 1175
QRMK + KKS K TK + +KK NKK +KV+KNS+YS+S+K+ P SG+GQ K
Sbjct: 299 QRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKK 358
Query: 1176 WTTLVHNGVI 1205
WTTLVHNGVI
Sbjct: 359 WTTLVHNGVI 368
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 180 bits (457), Expect = 1e-42
Identities = 138/395 (34%), Positives = 191/395 (48%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK QKH +G+ A++
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDS-IPSTSMTGELNSVKRQ 539
+ I PL N S I S +L++
Sbjct: 58 DVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATS 117
Query: 540 ITGENALNKSTSG------------PNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+ +KS++ N +SE S+D+KPL AR S K S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + I +SEDS+D+ PLS +F KSS S EKKPL A+ QNGS S
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASR 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
+ K +++ KR +VK ++ SSLK+PKLS T T NK+++ K E K EDD+D++P
Sbjct: 238 DGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSTITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+
Sbjct: 358 SKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVM 392
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 180 bits (456), Expect = 1e-42
Identities = 140/395 (35%), Positives = 188/395 (47%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK QKH +G+ A++
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLN-------LRMP--DSIPSTSMTG 515
I PL N + P +S PS S T
Sbjct: 58 DVRPANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATS 117
Query: 516 ELNSVKRQITGENALNKSTSGP----NEDSEDSEDDKPLSARF----SKVNSGNAYKGAN 671
+ + S P N +SE S+D+KPLSAR SK S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + I +SEDS+D+ PLS +F KSS S EKKPL A+ NGS S
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASR 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
+ K +++ KR +VK ++ SSLK+PKLS T NK+++ K E K EDD+D++P
Sbjct: 238 DSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGVI
Sbjct: 358 SKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVI 392
>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
Length = 920
Score = 179 bits (453), Expect = 3e-42
Identities = 137/395 (34%), Positives = 190/395 (48%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK QKH +G+ A++
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDS-IPSTSMTGELNSVKRQ 539
+ I PL N S I S +L++
Sbjct: 58 DVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATS 117
Query: 540 ITGENALNKSTSG------------PNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+ +KS++ N +SE S+D+KPL AR S K S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + + +SEDS+D+ PLS +F KSS S EKKPL A+ QNGS S
Sbjct: 178 DSCSIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASR 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
+ K +++ KR +VK ++ SSLK+PKLS T NK+++ K E K EDD+D++P
Sbjct: 238 DGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGVI
Sbjct: 358 SKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVI 392
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 178 bits (452), Expect = 4e-42
Identities = 138/395 (34%), Positives = 186/395 (47%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK Q+H +G+ A++
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMP---------DSIPSTSMTG 515
I PL N +S PS S T
Sbjct: 58 DVRPANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATS 117
Query: 516 ELNSVKRQITGENALNKSTSGP----NEDSEDSEDDKPLSARF----SKVNSGNAYKGAN 671
+ + S P N +SE S+D+KPLSAR SK S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + I +SEDS+D+ PLS +F KSS S EKKPL A+ NGS S
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASR 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
+ K +++ KR +VK ++ SSLK+PKLS T NK+++ K E K EDD+D++P
Sbjct: 238 DSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGVI
Sbjct: 358 SKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVI 392
>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
Length = 926
Score = 178 bits (452), Expect = 4e-42
Identities = 137/395 (34%), Positives = 191/395 (48%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK QKH +G+ A++
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPTSKQNQANAEKKKLSLQKH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDS-IPSTSMTGELNSVKRQ 539
+ I PL N S I S +L++
Sbjct: 58 DVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATS 117
Query: 540 ITGENALNKSTSG------------PNEDSEDSEDDKPLSARFSKVNS----GNAYKGAN 671
+ +KS++ N +SE S+D+KPL AR S +S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSMGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + I +SEDS+D+ PLS +F KSS S EKKPL A+ QNGS S
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASP 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
E K +++ KR +VK ++ SSLK+PKLS T NK+++ K E K EDD+D++P
Sbjct: 238 EGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ V + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTAASKPKDEDDDHAPISQRIKKSPVSVSKSSAPVKKASTVVSTSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV++ + Y++SSKVPP SGEGQKWTTLVHNGV+
Sbjct: 358 SKKVIRKTAYTKSSKVPPGSGEGQKWTTLVHNGVM 392
>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
topoisomerase 1-like isoform X2 [Citrus sinensis]
gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
topoisomerase 1-like isoform X3 [Citrus sinensis]
gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
topoisomerase 1-like isoform X4 [Citrus sinensis]
Length = 902
Score = 177 bits (450), Expect = 6e-42
Identities = 141/370 (38%), Positives = 182/370 (49%), Gaps = 29/370 (7%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDD-EDAPMVFKRXXXXXXXXXXXPETKK---SLPQKHDQQLGRPA 350
MAVEA K + D DD ED P VFKR PE K+ S + +
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKRPSSSTANGQNSNAPKDK 60
Query: 351 LNARXXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDSIP--STSMTGELN 524
+ P + A P+ + +R P P ++ + L+
Sbjct: 61 TTVSSSKVLPVKSPPPSQKATTSSAKASPSKSPMRSPVKSPVRSPVKSPVANSKESSPLD 120
Query: 525 SVKRQITGENALN-------KSTSGPNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+Q NAL K +G D DSEDDKPLSAR VN G A+
Sbjct: 121 DRLKQSPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGNSKNVNQGIGASKAD 180
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFR--------VKSSTSAEKKPLLAECGQNGSISGE 827
S N K EDSDD+VPLSS+F K S EKKPL ++ QNGS S E
Sbjct: 181 AAISEVNVKTDP-EDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRE 239
Query: 828 --RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVPIS 1001
+K S+V KR + ASS K+PK+S+TS K K+ + K E K+ DD+DH+PIS
Sbjct: 240 TQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVE-KKADDDDHIPIS 298
Query: 1002 QRMKKTVLLEKKSAV-VKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQ-K 1175
QRMK + KKS K TK + + K NKK +KV+KNS+YS+S+K+ P SG+GQ K
Sbjct: 299 QRMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSKSTKMLPGSGDGQKK 358
Query: 1176 WTTLVHNGVI 1205
WTTLVHNGVI
Sbjct: 359 WTTLVHNGVI 368
>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
Length = 920
Score = 177 bits (450), Expect = 6e-42
Identities = 136/395 (34%), Positives = 190/395 (48%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK QKH +G+ A++
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDS-IPSTSMTGELNSVKRQ 539
+ I PL N S I S +L++
Sbjct: 58 DVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATS 117
Query: 540 ITGENALNKSTSG------------PNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+ +KS++ N +SE S+D+KPL AR S K S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + + +SEDS+D+ PLS +F KSS S EKKPL A+ QNGS S
Sbjct: 178 DSCSIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASR 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
+ K +++ KR +VK ++ SSLK+PKLS T NK+++ K E K EDD+D++P
Sbjct: 238 DGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+
Sbjct: 358 SKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVM 392
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 177 bits (450), Expect = 6e-42
Identities = 136/395 (34%), Positives = 190/395 (48%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK QKH +G+ A++
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDS-IPSTSMTGELNSVKRQ 539
+ I PL N S I S +L++
Sbjct: 58 DVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATS 117
Query: 540 ITGENALNKSTSG------------PNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+ +KS++ N +SE S+D+KPL AR S K S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + + +SEDS+D+ PLS +F KSS S EKKPL A+ QNGS S
Sbjct: 178 DSCSIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASR 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
+ K +++ KR +VK ++ SSLK+PKLS T NK+++ K E K EDD+D++P
Sbjct: 238 DGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+
Sbjct: 358 SKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVM 392
>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
Length = 920
Score = 177 bits (448), Expect = 1e-41
Identities = 137/395 (34%), Positives = 189/395 (47%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK QKH +G+ A++
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDS-IPSTSMTGELNSVKRQ 539
+ I PL N S I S +L++
Sbjct: 58 DVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATS 117
Query: 540 ITGENALNKSTSG------------PNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+ +KS++ N +SE S+D+KPL AR S K S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + I +SEDS+D+ PLS +F KSS S EKKPL A+ NGS S
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASR 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
+ K +++ KR +VK ++ SSLK+PKLS T NK+++ K E K EDD+D++P
Sbjct: 238 DGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGVI
Sbjct: 358 SKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVI 392
>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
topoisomerase I [Nicotiana tabacum]
Length = 852
Score = 177 bits (448), Expect = 1e-41
Identities = 147/367 (40%), Positives = 185/367 (50%), Gaps = 26/367 (7%)
Frame = +3
Query: 183 MAVEACDKQK---EMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPAL 353
MAVEA K K E+DD DD+D P+VFKR S QK D + GR A
Sbjct: 1 MAVEAFSKTKLMAEVDD-DDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQAS 54
Query: 354 NARXXXXXXXXAFLPGHRLIDLL**AQNYLIPL------PGDWQLNLRMPDSIPSTSMTG 515
+ R A A + P P + + P+S PS S
Sbjct: 55 DVRSPNGQSSSAEKVKAGTSSK---ASRAVSPFTSPKASPSSGRTS-PAPNSRPSASAGN 110
Query: 516 ELNSVKRQ---ITGE-NALNKSTSGPNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+ V +Q + E + S PN+++EDSEDDKPLSAR S K NS +A K
Sbjct: 111 QAKDVNQQSKIVPNEPKQAVEPKSEPNDEAEDSEDDKPLSARLSSGLSKSNSSHANKVLG 170
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKS---------STSAEKKPLLAECGQNGSISG 824
T S Q S+ PK EDSDD++PL+S+F++KS S S E KP + QNG S
Sbjct: 171 TSASVQKSRPPKKEDSDDEIPLASRFQLKSNAGASTSKSSNSEEVKPKIR---QNGLPS- 226
Query: 825 ERKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVPISQ 1004
+TVL KR DV + LK L + E+S K E K EDD+D VPISQ
Sbjct: 227 ----TTVLSKRPPGDVSLLLRLQLKSLGFLMHLHLFRVSEASVKPEKKTEDDDDDVPISQ 282
Query: 1005 RMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTT 1184
R+KK+V K + KK TK + + K +K LK SKYS+SSK+ PSSGEGQKWTT
Sbjct: 283 RIKKSVASASKLSSAKKATKVVSS-----SMKTKKKLKKSKYSKSSKLQPSSGEGQKWTT 337
Query: 1185 LVHNGVI 1205
LVHNGVI
Sbjct: 338 LVHNGVI 344
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 176 bits (445), Expect = 2e-41
Identities = 136/395 (34%), Positives = 189/395 (47%), Gaps = 54/395 (13%)
Frame = +3
Query: 183 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 362
MAVEAC M+D++D++ P++FKR E KK QKH +G+ A++
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKH---VGQSAVHTS 57
Query: 363 XXXXXXXXAFLPGHRLIDLL**AQNYLIPLPGDWQLNLRMPDS-IPSTSMTGELNSVKRQ 539
+ I PL N S I S +L++
Sbjct: 58 DVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATS 117
Query: 540 ITGENALNKSTSG------------PNEDSEDSEDDKPLSARFS----KVNSGNAYKGAN 671
+ +KS++ N +SE S+D+KPL AR S K S +A K
Sbjct: 118 TAKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGG 177
Query: 672 TLNSGQNSKIPKSEDSDDKVPLSSKFRVKSST---------SAEKKPLLAECGQNGSISG 824
S + I +SEDS+D+ PLS +F KSS S EKKPL + QNGS S
Sbjct: 178 DSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASR 237
Query: 825 E---RKPSTVLKKRNVDDVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVP 995
+ K +++L KR +VK ++ SSLK+ KLS T NK+++ K E K EDD+D++P
Sbjct: 238 DGPMNKSASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAEDDDDNIP 297
Query: 996 ISQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKK 1100
+SQR KK+ + K SA VKK + KK NKK
Sbjct: 298 LSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKK 357
Query: 1101 PEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVI 1205
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+
Sbjct: 358 SKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVM 392
>ref|XP_007020667.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
gi|508720295|gb|EOY12192.1| DNA topoisomerase I alpha
isoform 4, partial [Theobroma cacao]
Length = 733
Score = 174 bits (441), Expect = 7e-41
Identities = 109/235 (46%), Positives = 147/235 (62%), Gaps = 21/235 (8%)
Frame = +3
Query: 564 KSTSGPNEDSEDSEDDKPLSARFSKV-NSGNAYKGANTLNSGQNSK-IPKSE------DS 719
K T+ PN D +D +D PLSAR + N GN KGA+T Q+ + +PK+E D
Sbjct: 13 KGTTEPNSDDDDDDDSLPLSARLKGISNQGN--KGASTSAPAQSRRLVPKTEVKVSAEDP 70
Query: 720 DDKVPLSSKFRVKSSTSA---------EKKPLLAECGQNGSI--SGERKPSTVLKKRNVD 866
DD+ PLS++F VKS+T EKKPL ++ QNGSI ++ ST+ KR +D
Sbjct: 71 DDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQNSSTLSGKRPLD 130
Query: 867 DVKPIDASSLKRPKLSETSTLHKNKESSTKAEMKEEDDEDHVPISQRMKKTVLLEKK-SA 1043
D SS K+PK S+ T K K+ + KAE +EDD DH+PI+QRMKK+ K S+
Sbjct: 131 KGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADEDD-DHMPIAQRMKKSTASNSKLSS 189
Query: 1044 VVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQ-KWTTLVHNGVI 1205
+ +K TK + KK NKK +K +K+SKY +S+KVPPSSG+GQ KW+TLVHNGVI
Sbjct: 190 MKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDGQKKWSTLVHNGVI 244