BLASTX nr result

ID: Mentha24_contig00021179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00021179
         (634 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007025790.1| F-box/RNI-like superfamily protein, putative...    58   2e-06

>ref|XP_007025790.1| F-box/RNI-like superfamily protein, putative [Theobroma cacao]
           gi|508781156|gb|EOY28412.1| F-box/RNI-like superfamily
           protein, putative [Theobroma cacao]
          Length = 528

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
 Frame = +3

Query: 6   LRMWGVPYSR-YLLQNVSSLTLATLGFHGPSHHEFDSCPWNDFLGER--LREIFPAIQHV 176
           L + G  Y R Y L +VSSL+ A LGF        D     D+   R  LRE+   + HV
Sbjct: 290 LSLLGFMYRRTYRLMHVSSLSKANLGFV----MTIDKKDKYDYTKHRYILRELLEKLCHV 345

Query: 177 EKVALSDWSIQELEAAVDK--SLPLPCPNIKILKLKGCLEEYEQILGLLETFPNLTRLIL 350
           E++ +  W +Q L     K  S PL   +  +L  + C  +   I+ LL++ P L +L+L
Sbjct: 346 EELTVGTWCLQVLSIWEIKGISSPLSKRSCLVLDTEICEWDLPGIVSLLQSSPYLKKLVL 405

Query: 351 EAEPDHQPIRADDAESFSDLEFQTSSFLSQLRTAKVSWMKG-----DTAFYP-------- 491
              P        D E F+  E    +FLS       S+++       T F P        
Sbjct: 406 NLSPCDNSKFEFDQEFFNSYELDGVAFLSSANWIFKSFLQSLEDIEITGFQPSSSGSKLL 465

Query: 492 --LVELVLKHASQLEKVV 539
             L++ +LK A++L+KVV
Sbjct: 466 VELMQFLLKDATELKKVV 483


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