BLASTX nr result
ID: Mentha24_contig00020861
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00020861
(302 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l... 113 2e-23
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l... 113 2e-23
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l... 113 2e-23
gb|EPS72133.1| hypothetical protein M569_02623, partial [Genlise... 110 2e-22
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l... 106 3e-21
gb|EYU36395.1| hypothetical protein MIMGU_mgv1a000784mg [Mimulus... 106 4e-21
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 106 4e-21
emb|CBI19367.3| unnamed protein product [Vitis vinifera] 106 4e-21
ref|XP_006306359.1| hypothetical protein CARUB_v10012256mg [Caps... 105 7e-21
ref|NP_175113.2| pre-mRNA-processing protein 40A [Arabidopsis th... 105 7e-21
dbj|BAH19565.1| AT1G44910 [Arabidopsis thaliana] 105 7e-21
ref|NP_001117438.1| pre-mRNA-processing protein 40A [Arabidopsis... 105 7e-21
ref|XP_006486888.1| PREDICTED: pre-mRNA-processing protein 40A-l... 105 9e-21
ref|XP_006422754.1| hypothetical protein CICLE_v100277412mg, par... 105 9e-21
ref|XP_006393693.1| hypothetical protein EUTSA_v10011212mg [Eutr... 104 1e-20
ref|XP_006393692.1| hypothetical protein EUTSA_v10011212mg [Eutr... 104 1e-20
ref|XP_002891304.1| hypothetical protein ARALYDRAFT_891421 [Arab... 104 1e-20
ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 102 7e-20
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l... 102 7e-20
ref|XP_002510055.1| protein binding protein, putative [Ricinus c... 100 2e-19
>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
tuberosum]
Length = 864
Score = 113 bits (283), Expect = 2e-23
Identities = 55/100 (55%), Positives = 69/100 (69%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK ++KDV+K EKI ++STWTFEDFK + +
Sbjct: 691 SNTSGSTPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGS 750
Query: 181 SSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXXDFTDK 300
SI D+N+QL++EDL++ DFTDK
Sbjct: 751 PSIHDVNLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDK 790
>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
tuberosum]
Length = 872
Score = 113 bits (283), Expect = 2e-23
Identities = 55/100 (55%), Positives = 69/100 (69%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK ++KDV+K EKI ++STWTFEDFK + +
Sbjct: 691 SNTSGSTPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGS 750
Query: 181 SSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXXDFTDK 300
SI D+N+QL++EDL++ DFTDK
Sbjct: 751 PSIHDVNLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDK 790
>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
tuberosum]
Length = 1031
Score = 113 bits (283), Expect = 2e-23
Identities = 55/100 (55%), Positives = 69/100 (69%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK ++KDV+K EKI ++STWTFEDFK + +
Sbjct: 691 SNTSGSTPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGS 750
Query: 181 SSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXXDFTDK 300
SI D+N+QL++EDL++ DFTDK
Sbjct: 751 PSIHDVNLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDK 790
>gb|EPS72133.1| hypothetical protein M569_02623, partial [Genlisea aurea]
Length = 204
Score = 110 bits (276), Expect = 2e-22
Identities = 60/99 (60%), Positives = 66/99 (66%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SN GSTPKDLFE+V EELEKKYDEDKA IKD LKQEKI +AS+ TFE FKS DS
Sbjct: 51 SNIYGSTPKDLFEEVAEELEKKYDEDKAFIKDFLKQEKITIASSLTFEVFKSDIMDSVSF 110
Query: 181 SSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXXDFTD 297
+SISD N++LVYEDLID DFTD
Sbjct: 111 ASISDTNMKLVYEDLIDRAKEKEEKEAKKLKRLAKDFTD 149
>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
lycopersicum]
Length = 998
Score = 106 bits (265), Expect = 3e-21
Identities = 53/100 (53%), Positives = 66/100 (66%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK +KDV+K EKI ++ T TFEDFK + +
Sbjct: 691 SNTSGSTPKDLFEDVTEELEKQYHEDKIHVKDVVKSEKITISPTCTFEDFKVAILEGISS 750
Query: 181 SSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXXDFTDK 300
SI D+N+QL++EDL++ DFTDK
Sbjct: 751 PSIQDVNLQLIFEDLVERAKEKEEKEAKKRQRLAKDFTDK 790
>gb|EYU36395.1| hypothetical protein MIMGU_mgv1a000784mg [Mimulus guttatus]
Length = 987
Score = 106 bits (264), Expect = 4e-21
Identities = 59/99 (59%), Positives = 65/99 (65%)
Frame = +1
Query: 4 NTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLS 183
NTSGSTPKDLFEDV EEL KKYDEDKA+IKD LK EK+ +AST TF+DFKSS +S
Sbjct: 677 NTSGSTPKDLFEDVAEELVKKYDEDKARIKDALKHEKVTIASTTTFDDFKSSIEESIGSP 736
Query: 184 SISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXXDFTDK 300
SISDIN+Q DLID DFTDK
Sbjct: 737 SISDINLQ----DLIDRAKDKEEKEAKKLKRLAKDFTDK 771
>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
vinifera]
Length = 1020
Score = 106 bits (264), Expect = 4e-21
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDV EELEK+Y EDKA+IKD +K K+ +ASTWTF DFK++ D
Sbjct: 713 SNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFKAAILDDVGS 772
Query: 181 SSISDINVQLVYEDLID 231
+ISD+N++LV+E+L+D
Sbjct: 773 PNISDVNLKLVFEELLD 789
>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
Length = 1030
Score = 106 bits (264), Expect = 4e-21
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDV EELEK+Y EDKA+IKD +K K+ +ASTWTF DFK++ D
Sbjct: 723 SNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFKAAILDDVGS 782
Query: 181 SSISDINVQLVYEDLID 231
+ISD+N++LV+E+L+D
Sbjct: 783 PNISDVNLKLVFEELLD 799
>ref|XP_006306359.1| hypothetical protein CARUB_v10012256mg [Capsella rubella]
gi|482575070|gb|EOA39257.1| hypothetical protein
CARUB_v10012256mg [Capsella rubella]
Length = 966
Score = 105 bits (262), Expect = 7e-21
Identities = 46/77 (59%), Positives = 63/77 (81%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SN SGSTPKDLFEDVTEELEK+Y EDK+++KD +K KI++ S+W FEDFKS+ + +
Sbjct: 657 SNLSGSTPKDLFEDVTEELEKQYHEDKSRVKDAMKSRKISMVSSWLFEDFKSAISEDLIP 716
Query: 181 SSISDINVQLVYEDLID 231
ISDIN++L+Y+DL++
Sbjct: 717 QPISDINLKLIYDDLVE 733
>ref|NP_175113.2| pre-mRNA-processing protein 40A [Arabidopsis thaliana]
gi|395406802|sp|B6EUA9.1|PR40A_ARATH RecName:
Full=Pre-mRNA-processing protein 40A; AltName:
Full=Mediator of RNA polymerase II transcription subunit
35a gi|332193941|gb|AEE32062.1| pre-mRNA-processing
protein 40A [Arabidopsis thaliana]
Length = 958
Score = 105 bits (262), Expect = 7e-21
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK+ +KD +K KI++ S+W FEDFKS+ +
Sbjct: 657 SNTSGSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLFEDFKSAISEDLST 716
Query: 181 SSISDINVQLVYEDLI 228
ISDIN++L+Y+DL+
Sbjct: 717 QQISDINLKLIYDDLV 732
>dbj|BAH19565.1| AT1G44910 [Arabidopsis thaliana]
Length = 826
Score = 105 bits (262), Expect = 7e-21
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK+ +KD +K KI++ S+W FEDFKS+ +
Sbjct: 657 SNTSGSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLFEDFKSAISEDLST 716
Query: 181 SSISDINVQLVYEDLI 228
ISDIN++L+Y+DL+
Sbjct: 717 QQISDINLKLIYDDLV 732
>ref|NP_001117438.1| pre-mRNA-processing protein 40A [Arabidopsis thaliana]
gi|332193942|gb|AEE32063.1| pre-mRNA-processing protein
40A [Arabidopsis thaliana]
Length = 926
Score = 105 bits (262), Expect = 7e-21
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK+ +KD +K KI++ S+W FEDFKS+ +
Sbjct: 657 SNTSGSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLFEDFKSAISEDLST 716
Query: 181 SSISDINVQLVYEDLI 228
ISDIN++L+Y+DL+
Sbjct: 717 QQISDINLKLIYDDLV 732
>ref|XP_006486888.1| PREDICTED: pre-mRNA-processing protein 40A-like [Citrus sinensis]
Length = 1001
Score = 105 bits (261), Expect = 9e-21
Identities = 47/77 (61%), Positives = 64/77 (83%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDV EEL+K+Y EDK +IKD +K +KI+++STWTFEDFK+S +
Sbjct: 704 SNTSGSTPKDLFEDVAEELQKQYQEDKTRIKDAVKLKKISLSSTWTFEDFKASILEDVTS 763
Query: 181 SSISDINVQLVYEDLID 231
ISD+N++LV++DL++
Sbjct: 764 PPISDVNIKLVFDDLLE 780
>ref|XP_006422754.1| hypothetical protein CICLE_v100277412mg, partial [Citrus
clementina] gi|557524688|gb|ESR35994.1| hypothetical
protein CICLE_v100277412mg, partial [Citrus clementina]
Length = 864
Score = 105 bits (261), Expect = 9e-21
Identities = 47/77 (61%), Positives = 64/77 (83%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDV EEL+K+Y EDK +IKD +K +KI+++STWTFEDFK+S +
Sbjct: 704 SNTSGSTPKDLFEDVAEELQKQYQEDKTRIKDAVKLKKISLSSTWTFEDFKASILEDVTS 763
Query: 181 SSISDINVQLVYEDLID 231
ISD+N++LV++DL++
Sbjct: 764 PPISDVNIKLVFDDLLE 780
>ref|XP_006393693.1| hypothetical protein EUTSA_v10011212mg [Eutrema salsugineum]
gi|557090271|gb|ESQ30979.1| hypothetical protein
EUTSA_v10011212mg [Eutrema salsugineum]
Length = 958
Score = 104 bits (259), Expect = 1e-20
Identities = 46/77 (59%), Positives = 62/77 (80%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK+++KD +K KI++ S+W FEDFKS+ +
Sbjct: 648 SNTSGSTPKDLFEDVTEELEKQYHEDKSRVKDAMKSRKISMVSSWMFEDFKSAISEDLST 707
Query: 181 SSISDINVQLVYEDLID 231
IS+IN++L+Y DL++
Sbjct: 708 QPISEINLKLIYNDLVE 724
>ref|XP_006393692.1| hypothetical protein EUTSA_v10011212mg [Eutrema salsugineum]
gi|557090270|gb|ESQ30978.1| hypothetical protein
EUTSA_v10011212mg [Eutrema salsugineum]
Length = 957
Score = 104 bits (259), Expect = 1e-20
Identities = 46/77 (59%), Positives = 62/77 (80%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDVTEELEK+Y EDK+++KD +K KI++ S+W FEDFKS+ +
Sbjct: 647 SNTSGSTPKDLFEDVTEELEKQYHEDKSRVKDAMKSRKISMVSSWMFEDFKSAISEDLST 706
Query: 181 SSISDINVQLVYEDLID 231
IS+IN++L+Y DL++
Sbjct: 707 QPISEINLKLIYNDLVE 723
>ref|XP_002891304.1| hypothetical protein ARALYDRAFT_891421 [Arabidopsis lyrata subsp.
lyrata] gi|297337146|gb|EFH67563.1| hypothetical protein
ARALYDRAFT_891421 [Arabidopsis lyrata subsp. lyrata]
Length = 967
Score = 104 bits (259), Expect = 1e-20
Identities = 46/76 (60%), Positives = 61/76 (80%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFED+TEELEK+Y EDK+ +KD +K KI++ S+W FEDFKS+ +
Sbjct: 658 SNTSGSTPKDLFEDITEELEKQYHEDKSYVKDAMKSRKISMVSSWLFEDFKSAISEDLSS 717
Query: 181 SSISDINVQLVYEDLI 228
ISDIN++L+Y+DL+
Sbjct: 718 QPISDINLKLIYDDLV 733
>ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein
40A-like, partial [Cucumis sativus]
Length = 803
Score = 102 bits (253), Expect = 7e-20
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDV E+LE KY E+K QIKDV+K KI + S+WTF+DFK++ +S L
Sbjct: 501 SNTSGSTPKDLFEDVLEDLENKYHEEKTQIKDVVKAAKITITSSWTFDDFKAAIEESGSL 560
Query: 181 SSISDINVQLVYEDLID 231
++SDIN +LVYEDL++
Sbjct: 561 -AVSDINFKLVYEDLLE 576
>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
Length = 985
Score = 102 bits (253), Expect = 7e-20
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
SNTSGSTPKDLFEDV E+LE KY E+K QIKDV+K KI + S+WTF+DFK++ +S L
Sbjct: 683 SNTSGSTPKDLFEDVLEDLENKYHEEKTQIKDVVKAAKITITSSWTFDDFKAAIEESGSL 742
Query: 181 SSISDINVQLVYEDLID 231
++SDIN +LVYEDL++
Sbjct: 743 -AVSDINFKLVYEDLLE 758
>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
gi|223550756|gb|EEF52242.1| protein binding protein,
putative [Ricinus communis]
Length = 970
Score = 100 bits (250), Expect = 2e-19
Identities = 45/77 (58%), Positives = 61/77 (79%)
Frame = +1
Query: 1 SNTSGSTPKDLFEDVTEELEKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVL 180
+NTSGSTPKDLFEDV EELEK+Y +DKA++KD +K KI + STW FEDFK++ D
Sbjct: 663 TNTSGSTPKDLFEDVAEELEKQYRDDKARVKDAIKSGKIIMTSTWIFEDFKAAILDDVSS 722
Query: 181 SSISDINVQLVYEDLID 231
+SDIN+QL+Y++L++
Sbjct: 723 PPVSDINLQLIYDELLE 739